Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326A08f
         (352 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030159-1|ABN49298.1|  363|Drosophila melanogaster IP17715p pro...    39   0.002
AE013599-2351|AAF57949.1|  366|Drosophila melanogaster CG15615-P...    39   0.002
AL035245-1|CAA22835.1|  323|Drosophila melanogaster EG:BACH61I5....    27   8.9  
AE014298-305|AAF45701.1|  323|Drosophila melanogaster CG3600-PA ...    27   8.9  

>BT030159-1|ABN49298.1|  363|Drosophila melanogaster IP17715p
           protein.
          Length = 363

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 264 PSPDHHE-HVHESHGWDRSDNNEASCR 341
           PSPDHH+ H HE H WDR D    + R
Sbjct: 274 PSPDHHDHHHHEHHDWDRKDTGVTATR 300


>AE013599-2351|AAF57949.1|  366|Drosophila melanogaster CG15615-PA
           protein.
          Length = 366

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 264 PSPDHHE-HVHESHGWDRSDNNEASCR 341
           PSPDHH+ H HE H WDR D    + R
Sbjct: 277 PSPDHHDHHHHEHHDWDRKDTGVTATR 303


>AL035245-1|CAA22835.1|  323|Drosophila melanogaster EG:BACH61I5.1
           protein.
          Length = 323

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 276 HHEHVHESHGWDRSD 320
           HH H H  HG D+S+
Sbjct: 187 HHHHYHHHHGGDKSE 201


>AE014298-305|AAF45701.1|  323|Drosophila melanogaster CG3600-PA
           protein.
          Length = 323

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 276 HHEHVHESHGWDRSD 320
           HH H H  HG D+S+
Sbjct: 187 HHHHYHHHHGGDKSE 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,741,387
Number of Sequences: 53049
Number of extensions: 140879
Number of successful extensions: 813
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)