Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326A07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64857-9|AAC25863.3|  302|Caenorhabditis elegans Hypothetical pr...    44   7e-05
U64857-8|AAM29667.1|  350|Caenorhabditis elegans Hypothetical pr...    44   7e-05
Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>U64857-9|AAC25863.3|  302|Caenorhabditis elegans Hypothetical
           protein C37C3.8a protein.
          Length = 302

 Score = 44.0 bits (99), Expect = 7e-05
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -3

Query: 519 ILGPSHHVRIAGCALSSLDKYQTPLYDLTID 427
           ILGPSH V + GCA+++  KY+TPL DL +D
Sbjct: 79  ILGPSHVVALNGCAITTCSKYRTPLGDLIVD 109


>U64857-8|AAM29667.1|  350|Caenorhabditis elegans Hypothetical
           protein C37C3.8b protein.
          Length = 350

 Score = 44.0 bits (99), Expect = 7e-05
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -3

Query: 519 ILGPSHHVRIAGCALSSLDKYQTPLYDLTID 427
           ILGPSH V + GCA+++  KY+TPL DL +D
Sbjct: 127 ILGPSHVVALNGCAITTCSKYRTPLGDLIVD 157


>Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical
           protein R11A8.4 protein.
          Length = 607

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 255 QMIPHVNSISNILGNCTLLMRQVDITLKG 341
           + +PH N+   +LGNC  ++R +  +L G
Sbjct: 354 ESLPHYNADIELLGNCDDIIRDICFSLGG 382


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,580,887
Number of Sequences: 27780
Number of extensions: 199418
Number of successful extensions: 484
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)