Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325H12f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 1.4
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 1.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 2.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 5.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 5.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 5.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 5.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.8
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 5.8
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 283 CSNYSYVNMCVHYIGRYVDIYGAVR 357
CS S +N+C + RY+ I +R
Sbjct: 108 CSTASILNLCAISLDRYIHIKDPLR 132
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 56 YLNYNSISKIKNRHTNNY 3
Y NYN+ + N + NNY
Sbjct: 324 YSNYNNYNNYNNNNYNNY 341
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = +2
Query: 251 NKYNNNITSAIVPIIAMSTCVCTIS 325
NK+NNN+ + + +++C +S
Sbjct: 305 NKFNNNVYKDALIVCTVNSCTSMLS 329
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = +2
Query: 251 NKYNNNITSAIVPIIAMSTCVCTIS 325
NK+NNN+ + + +++C +S
Sbjct: 358 NKFNNNVYKDALIVCTVNSCTSMLS 382
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 50 NYNSISKIKNRHTNNY 3
NYN+ + N + NNY
Sbjct: 333 NYNNYNNYNNNYNNNY 348
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 183 FKPTSSEDSETGQLGR 230
F+ + SEDSETG R
Sbjct: 15 FRQSRSEDSETGLRSR 30
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 183 FKPTSSEDSETGQLGR 230
F+ + SEDSETG R
Sbjct: 15 FRQSRSEDSETGLRSR 30
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 183 FKPTSSEDSETGQLGR 230
F+ + SEDSETG R
Sbjct: 15 FRQSRSEDSETGLRSR 30
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 183 FKPTSSEDSETGQLGR 230
F+ + SEDSETG R
Sbjct: 15 FRQSRSEDSETGLRSR 30
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 183 FKPTSSEDSETGQLGR 230
F+ + SEDSETG R
Sbjct: 15 FRQSRSEDSETGLRSR 30
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 183 FKPTSSEDSETGQLGR 230
F+ + SEDSETG R
Sbjct: 15 FRQSRSEDSETGLRSR 30
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 183 FKPTSSEDSETGQLGR 230
F+ + SEDSETG R
Sbjct: 15 FRQSRSEDSETGLRSR 30
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 183 FKPTSSEDSETGQLGR 230
F+ + SEDSETG R
Sbjct: 15 FRQSRSEDSETGLRSR 30
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -2
Query: 466 LFTQFACRTYGAITSLMQ*FLYNRYVIFI 380
+ + T+G +TS LY+ Y+ F+
Sbjct: 586 IHNNYPVHTFGRLTSKHDNSLYDEYIPFL 614
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,722
Number of Sequences: 438
Number of extensions: 2965
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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