Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325H06f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 30 4.3
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 4.3
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 30 4.3
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 4.3
BX640886-1|CAE45940.1| 167|Homo sapiens hypothetical protein pr... 29 7.5
BC132818-1|AAI32819.1| 909|Homo sapiens zinc finger and BTB dom... 29 7.5
AY336933-1|AAP97434.1| 422|Homo sapiens FRBZ1 protein. 29 7.5
AL627208-1|CAI14333.1| 909|Homo sapiens zinc finger and BTB dom... 29 7.5
AL356315-1|CAI13461.1| 909|Homo sapiens zinc finger and BTB dom... 29 7.5
AK093518-1|BAC04192.1| 428|Homo sapiens protein ( Homo sapiens ... 29 7.5
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -2
Query: 235 TRRATLAGPSLVESYKTKRDSSE*TMRQCTKFTSHSLEILSKWRSARTTRRSQQNDAPPH 56
TRR + + S + +++ +S T R+ TS S+ R++ TRR ++ PP
Sbjct: 998 TRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPA 1057
Query: 55 IRR 47
IRR
Sbjct: 1058 IRR 1060
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -2
Query: 235 TRRATLAGPSLVESYKTKRDSSE*TMRQCTKFTSHSLEILSKWRSARTTRRSQQNDAPPH 56
TRR + + S + +++ +S T R+ TS S+ R++ TRR ++ PP
Sbjct: 1966 TRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPA 2025
Query: 55 IRR 47
IRR
Sbjct: 2026 IRR 2028
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -2
Query: 235 TRRATLAGPSLVESYKTKRDSSE*TMRQCTKFTSHSLEILSKWRSARTTRRSQQNDAPPH 56
TRR + + S + +++ +S T R+ TS S+ R++ TRR ++ PP
Sbjct: 489 TRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPA 548
Query: 55 IRR 47
IRR
Sbjct: 549 IRR 551
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -2
Query: 235 TRRATLAGPSLVESYKTKRDSSE*TMRQCTKFTSHSLEILSKWRSARTTRRSQQNDAPPH 56
TRR + + S + +++ +S T R+ TS S+ R++ TRR ++ PP
Sbjct: 2014 TRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPA 2073
Query: 55 IRR 47
IRR
Sbjct: 2074 IRR 2076
>BX640886-1|CAE45940.1| 167|Homo sapiens hypothetical protein
protein.
Length = 167
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = -1
Query: 410 DVVHSLTNTDDARTTSGGLIVRTPVE-SSRTIVPHTRTR----YPQMIQKKLTHQRSNIS 246
D VH + + DD +TS +V PVE SS + T T+ P++ Q + N+S
Sbjct: 2 DHVHEIKSPDDPLSTSEEKLVSLPVEYSSDDKIFQTETKQYMDQPKVYQSEAKTMLQNVS 61
Query: 245 ARMNTP 228
A + P
Sbjct: 62 AEVCVP 67
>BC132818-1|AAI32819.1| 909|Homo sapiens zinc finger and BTB domain
containing 41 protein.
Length = 909
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = -1
Query: 410 DVVHSLTNTDDARTTSGGLIVRTPVE-SSRTIVPHTRTR----YPQMIQKKLTHQRSNIS 246
D VH + + DD +TS +V PVE SS + T T+ P++ Q + N+S
Sbjct: 744 DHVHEIKSPDDPLSTSEEKLVSLPVEYSSDDKIFQTETKQYMDQPKVYQSEAKTMLQNVS 803
Query: 245 ARMNTP 228
A + P
Sbjct: 804 AEVCVP 809
>AY336933-1|AAP97434.1| 422|Homo sapiens FRBZ1 protein.
Length = 422
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = -1
Query: 410 DVVHSLTNTDDARTTSGGLIVRTPVE-SSRTIVPHTRTR----YPQMIQKKLTHQRSNIS 246
D VH + + DD +TS +V PVE SS + T T+ P++ Q + N+S
Sbjct: 257 DHVHEIKSPDDPLSTSEEKLVSLPVEYSSDDKIFQTETKQYMDQPKVYQSEAKTMLQNVS 316
Query: 245 ARMNTP 228
A + P
Sbjct: 317 AEVCVP 322
>AL627208-1|CAI14333.1| 909|Homo sapiens zinc finger and BTB domain
containing 41 protein.
Length = 909
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = -1
Query: 410 DVVHSLTNTDDARTTSGGLIVRTPVE-SSRTIVPHTRTR----YPQMIQKKLTHQRSNIS 246
D VH + + DD +TS +V PVE SS + T T+ P++ Q + N+S
Sbjct: 744 DHVHEIKSPDDPLSTSEEKLVSLPVEYSSDDKIFQTETKQYMDQPKVYQSEAKTMLQNVS 803
Query: 245 ARMNTP 228
A + P
Sbjct: 804 AEVCVP 809
>AL356315-1|CAI13461.1| 909|Homo sapiens zinc finger and BTB domain
containing 41 protein.
Length = 909
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = -1
Query: 410 DVVHSLTNTDDARTTSGGLIVRTPVE-SSRTIVPHTRTR----YPQMIQKKLTHQRSNIS 246
D VH + + DD +TS +V PVE SS + T T+ P++ Q + N+S
Sbjct: 744 DHVHEIKSPDDPLSTSEEKLVSLPVEYSSDDKIFQTETKQYMDQPKVYQSEAKTMLQNVS 803
Query: 245 ARMNTP 228
A + P
Sbjct: 804 AEVCVP 809
>AK093518-1|BAC04192.1| 428|Homo sapiens protein ( Homo sapiens
cDNA FLJ36199 fis, clone TESTI2028253, weakly similar to
ZINC FINGER PROTEIN 135. ).
Length = 428
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = -1
Query: 410 DVVHSLTNTDDARTTSGGLIVRTPVE-SSRTIVPHTRTR----YPQMIQKKLTHQRSNIS 246
D VH + + DD +TS +V PVE SS + T T+ P++ Q + N+S
Sbjct: 263 DHVHEIKSPDDPLSTSEEKLVSLPVEYSSDDKIFQTETKQYMDQPKVYQSEAKTMLQNVS 322
Query: 245 ARMNTP 228
A + P
Sbjct: 323 AEVCVP 328
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,838,068
Number of Sequences: 237096
Number of extensions: 1164864
Number of successful extensions: 6420
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6420
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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