Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325H03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06589-2|CAA29813.1|  964|Drosophila melanogaster su(wa) protein...    30   2.2  
X06589-1|CAA29812.1| 1042|Drosophila melanogaster su(wa) protein...    30   2.2  
AY118635-1|AAM50004.1|  964|Drosophila melanogaster SD01276p pro...    30   2.2  
AL132651-1|CAB65880.1| 1032|Drosophila melanogaster EG:BACR7A4.1...    30   2.2  
AL109630-17|CAB65879.1| 1032|Drosophila melanogaster EG:BACR7A4....    30   2.2  
AE014298-146|AAG22382.2|  963|Drosophila melanogaster CG3019-PA,...    30   2.2  

>X06589-2|CAA29813.1|  964|Drosophila melanogaster su(wa) protein
            protein.
          Length = 964

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 310  SLERLYQLRPNM*VSSQGSNRSGANTGPSKSSASQNLSPDRKRDPLKRSGEK 465
            S  R   +R +  +S   +NR   +  PS  +A Q    DR+R P K+S ++
Sbjct: 903  SRSRSKSIRRSRSISILRNNRRSRSRSPSCRNAEQRRQQDRRRTPTKKSHKR 954


>X06589-1|CAA29812.1| 1042|Drosophila melanogaster su(wa) protein
            protein.
          Length = 1042

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 310  SLERLYQLRPNM*VSSQGSNRSGANTGPSKSSASQNLSPDRKRDPLKRSGEK 465
            S  R   +R +  +S   +NR   +  PS  +A Q    DR+R P K+S ++
Sbjct: 981  SRSRSKSIRRSRSISILRNNRRSRSRSPSCRNAEQRRQQDRRRTPTKKSHKR 1032


>AY118635-1|AAM50004.1|  964|Drosophila melanogaster SD01276p protein.
          Length = 964

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 310  SLERLYQLRPNM*VSSQGSNRSGANTGPSKSSASQNLSPDRKRDPLKRSGEK 465
            S  R   +R +  +S   +NR   +  PS  +A Q    DR+R P K+S ++
Sbjct: 903  SRSRSKSIRRSRSISILRNNRRSRSRSPSCRNAEQRRQQDRRRTPTKKSHKR 954


>AL132651-1|CAB65880.1| 1032|Drosophila melanogaster
            EG:BACR7A4.10,FBgn0003638;su(w[a]) protein.
          Length = 1032

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 310  SLERLYQLRPNM*VSSQGSNRSGANTGPSKSSASQNLSPDRKRDPLKRSGEK 465
            S  R   +R +  +S   +NR   +  PS  +A Q    DR+R P K+S ++
Sbjct: 971  SRSRSKSIRRSRSISILRNNRRSRSRSPSCRNAEQRRQQDRRRTPTKKSHKR 1022


>AL109630-17|CAB65879.1| 1032|Drosophila melanogaster
            EG:BACR7A4.10,FBgn0003638;su(w[a]) protein.
          Length = 1032

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 310  SLERLYQLRPNM*VSSQGSNRSGANTGPSKSSASQNLSPDRKRDPLKRSGEK 465
            S  R   +R +  +S   +NR   +  PS  +A Q    DR+R P K+S ++
Sbjct: 971  SRSRSKSIRRSRSISILRNNRRSRSRSPSCRNAEQRRQQDRRRTPTKKSHKR 1022


>AE014298-146|AAG22382.2|  963|Drosophila melanogaster CG3019-PA,
            isoform A protein.
          Length = 963

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 310  SLERLYQLRPNM*VSSQGSNRSGANTGPSKSSASQNLSPDRKRDPLKRSGEK 465
            S  R   +R +  +S   +NR   +  PS  +A Q    DR+R P K+S ++
Sbjct: 902  SRSRSKSIRRSRSISILRNNRRSRSRSPSCRNAEQRRQQDRRRTPTKKSHKR 953


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,035,215
Number of Sequences: 53049
Number of extensions: 308373
Number of successful extensions: 883
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)