Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325H03f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   3.3  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   4.4  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   4.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   5.8  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 216 ISRRIFSVYLDSNPVVNFAKHCS 148
           + R I  +YLD N V      CS
Sbjct: 83  VVREIAEIYLDENEVNKLITECS 105


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 216 ISRRIFSVYLDSNPVVNFAKHCS 148
           I + + S+YLD N +      CS
Sbjct: 83  IVQELTSIYLDENVIKKLVAECS 105


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 216 ISRRIFSVYLDSNPVVNFAKHCS 148
           I + + S+YLD N +      CS
Sbjct: 83  IVQELTSIYLDENVIKKLVAECS 105


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 180 LNRDKLRRFGEKFSGLCLPVTSHFGSHSSTSI 275
           L  +K  +FG+K    CLP      S + + +
Sbjct: 261 LKTEKDIKFGDKVGPACLPFQHFLDSFAGSDV 292


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,264
Number of Sequences: 438
Number of extensions: 2030
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)