Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325H02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058260-1|AAL13489.1|  407|Drosophila melanogaster GH01724p pro...    65   5e-11
AE013599-417|AAF59249.1|  407|Drosophila melanogaster CG11139-PA...    65   5e-11
AY069316-1|AAL39461.1|  303|Drosophila melanogaster LD03052p pro...    30   2.2  
AE014298-2564|AAO41692.1|  303|Drosophila melanogaster CG5445-PD...    30   2.2  
AE014298-2563|AAN09441.1|  303|Drosophila melanogaster CG5445-PC...    30   2.2  
AE014298-2562|AAF48724.1|  303|Drosophila melanogaster CG5445-PB...    30   2.2  
AE014298-2561|AAF48723.1|  303|Drosophila melanogaster CG5445-PA...    30   2.2  

>AY058260-1|AAL13489.1|  407|Drosophila melanogaster GH01724p
           protein.
          Length = 407

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
 Frame = +3

Query: 48  ANREDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYENG----------GNADEAP 197
           A R D + QF ++TG DE+ ++F+L S +W ++ AL +++             G+AD   
Sbjct: 2   AARGDLIAQFIEITGTDENVARFYLSSCDWDIEHALGNYWSTQADLPVPVPTVGHADNPK 61

Query: 198 ANPTSA----ASFSVLPDSDMXXXXXXXXXXXXXXXXXXXTSNTKFGTIGXXXXXXXXXX 365
             PTS+    AS S    +                      +  KF T+           
Sbjct: 62  PKPTSSSGASASASAAGATKSADSAVATSSASVDIAPAATKAKPKFATLSDMSKESSSDD 121

Query: 366 XXXXAFYAGGSERSGQQILGPSKGR--KDIVSEMFKSVRERGAVVFEDEPTSS 518
               AFYAGGS+RSGQQ+LGP K +  ++ +++M +S +E+   + E  P++S
Sbjct: 122 DQQ-AFYAGGSDRSGQQVLGPPKRKNFREQLTDMMRSAQEQN--IAEVGPSTS 171


>AE013599-417|AAF59249.1|  407|Drosophila melanogaster CG11139-PA
           protein.
          Length = 407

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
 Frame = +3

Query: 48  ANREDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYENG----------GNADEAP 197
           A R D + QF ++TG DE+ ++F+L S +W ++ AL +++             G+AD   
Sbjct: 2   AARGDLIAQFIEITGTDENVARFYLSSCDWDIEHALGNYWSTQADLPVPVPTVGHADNPK 61

Query: 198 ANPTSA----ASFSVLPDSDMXXXXXXXXXXXXXXXXXXXTSNTKFGTIGXXXXXXXXXX 365
             PTS+    AS S    +                      +  KF T+           
Sbjct: 62  PKPTSSSGASASASAAGATKSADSAVATSSASVDIAPAATKAKPKFATLSDMSKESSSDD 121

Query: 366 XXXXAFYAGGSERSGQQILGPSKGR--KDIVSEMFKSVRERGAVVFEDEPTSS 518
               AFYAGGS+RSGQQ+LGP K +  ++ +++M +S +E+   + E  P++S
Sbjct: 122 DQQ-AFYAGGSDRSGQQVLGPPKRKNFREQLTDMMRSAQEQN--IAEVGPSTS 171


>AY069316-1|AAL39461.1|  303|Drosophila melanogaster LD03052p
           protein.
          Length = 303

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 30  FEITMSANREDTLRQFCDVTGADEDR--SKFFLESSNWQLDVALSSFYE 170
           F    + + ED + QF  +     +R  ++F+LE SNW L  A+  + +
Sbjct: 122 FSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLD 170


>AE014298-2564|AAO41692.1|  303|Drosophila melanogaster CG5445-PD,
           isoform D protein.
          Length = 303

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 30  FEITMSANREDTLRQFCDVTGADEDR--SKFFLESSNWQLDVALSSFYE 170
           F    + + ED + QF  +     +R  ++F+LE SNW L  A+  + +
Sbjct: 122 FSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLD 170


>AE014298-2563|AAN09441.1|  303|Drosophila melanogaster CG5445-PC,
           isoform C protein.
          Length = 303

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 30  FEITMSANREDTLRQFCDVTGADEDR--SKFFLESSNWQLDVALSSFYE 170
           F    + + ED + QF  +     +R  ++F+LE SNW L  A+  + +
Sbjct: 122 FSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLD 170


>AE014298-2562|AAF48724.1|  303|Drosophila melanogaster CG5445-PB,
           isoform B protein.
          Length = 303

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 30  FEITMSANREDTLRQFCDVTGADEDR--SKFFLESSNWQLDVALSSFYE 170
           F    + + ED + QF  +     +R  ++F+LE SNW L  A+  + +
Sbjct: 122 FSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLD 170


>AE014298-2561|AAF48723.1|  303|Drosophila melanogaster CG5445-PA,
           isoform A protein.
          Length = 303

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 30  FEITMSANREDTLRQFCDVTGADEDR--SKFFLESSNWQLDVALSSFYE 170
           F    + + ED + QF  +     +R  ++F+LE SNW L  A+  + +
Sbjct: 122 FSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLD 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,134,075
Number of Sequences: 53049
Number of extensions: 391229
Number of successful extensions: 1186
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)