Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325H01f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0838 - 28550036-28550237,28550595-28550676,28550972-285510...    27   6.9  
03_02_0120 - 5728572-5728712,5728812-5728916,5729178-5729441,572...    27   9.1  

>04_04_0838 -
           28550036-28550237,28550595-28550676,28550972-28551011,
           28551342-28551416,28551448-28551543,28551710-28551805,
           28551897-28551974,28552064-28552170,28552450-28552477,
           28552777-28552898,28554106-28554172,28554336-28554508,
           28554763-28554846,28555616-28555733,28556093-28556164,
           28557026-28557118,28557484-28557636,28558000-28558086,
           28559436-28559528,28560416-28560643,28561106-28561207,
           28561390-28561596,28561798-28561846,28562385-28562537,
           28562649-28562712,28562905-28563175,28564008-28564072,
           28564184-28564337
          Length = 1052

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 390 EMYNWLQNYIQNFMIYE 340
           E Y+W+Q+Y  NF +YE
Sbjct: 288 ETYHWIQSYHLNFRLYE 304


>03_02_0120 -
           5728572-5728712,5728812-5728916,5729178-5729441,
           5729809-5729958,5730070-5730150,5730481-5730597,
           5730679-5730831,5731426-5731569,5731773-5731802,
           5732070-5732430,5732682-5732849,5733371-5733600,
           5734088-5734194,5734275-5734623
          Length = 799

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 429 NILDLFDEN*IINEMYNWLQNYIQNFMIYE 340
           N LDL ++   IN+++ +L +Y+Q   +YE
Sbjct: 392 NYLDLIEKEEDINKLFEFLISYMQVIKLYE 421


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,559,552
Number of Sequences: 37544
Number of extensions: 177663
Number of successful extensions: 283
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)