Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325H01f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.088
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   1.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.4  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 0.088
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 444 SVLNINILDLFDEN*IINEMYNWLQN 367
           S++  +I++  D+   +NE+YNW QN
Sbjct: 511 SLIRQSIIESPDKQLTLNEIYNWFQN 536


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 296 WLFYTINVLYYTSKKYINHLYNMCIINY 213
           WL+     LYY S      LYN+  I Y
Sbjct: 308 WLYILSGCLYYFSTTINPILYNLMSIKY 335



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 468 YNFFSLKISVLNINILDLFDEN*IINEMYNWL 373
           Y  FSL IS L + +L L +E  +  + Y W+
Sbjct: 77  YYLFSLAISDLILLVLGLPNELSLFWQQYPWV 108


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 88  FATHCTLHSDSSGTL 44
           F  +C  H+DSSG +
Sbjct: 420 FGAYCAAHTDSSGAM 434


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 88  FATHCTLHSDSSGTL 44
           F  +C  H+DSSG +
Sbjct: 420 FGAYCAAHTDSSGAV 434


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 269 YYTSKKYINHLYNMCIINYITFL 201
           Y+T    +NH Y M   NY  F+
Sbjct: 221 YFTEDVGLNHFYFMLNHNYPPFM 243


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 269 YYTSKKYINHLYNMCIINYITFL 201
           Y+T    +NH Y M   NY  F+
Sbjct: 221 YFTEDVGLNHFYFMLNHNYPPFM 243


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,848
Number of Sequences: 438
Number of extensions: 3002
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)