Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325G01f
         (506 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087079-2|AAK27863.1|   67|Caenorhabditis elegans Hypothetical ...   132   2e-31
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF016684-10|AAB66205.1|  340|Caenorhabditis elegans Hypothetical...    27   5.9  
Z78419-6|CAB01704.1|  487|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>AC087079-2|AAK27863.1|   67|Caenorhabditis elegans Hypothetical
           protein Y37E3.3 protein.
          Length = 67

 Score =  132 bits (318), Expect = 2e-31
 Identities = 56/67 (83%), Positives = 62/67 (92%)
 Frame = +1

Query: 208 MIIPVRCFTCGKVIGNKWEAYLGLLQADYTEGDALDVLGLKRYCCRRMLLGHVDLIEKLL 387
           MIIP+RCFTCGKVIG+KWE YLG LQ++Y+EGDALD LGL+RYCCRRMLL HVDLIEKLL
Sbjct: 1   MIIPIRCFTCGKVIGDKWETYLGFLQSEYSEGDALDALGLRRYCCRRMLLAHVDLIEKLL 60

Query: 388 NYSPLEK 408
           NY PLEK
Sbjct: 61  NYHPLEK 67


>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
           protein B0240.3 protein.
          Length = 1093

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 138 IVKALILYNPSASPQL*VVGNKQNDYSSTMFHM 236
           I  A+ ++ PSA   L  +GNK NDY+  M  M
Sbjct: 113 ISDAITIFEPSARVILLFLGNKLNDYTEFMTAM 145


>AF016684-10|AAB66205.1|  340|Caenorhabditis elegans Hypothetical
           protein F45C12.6 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 119 VFTFNNNRRYFSYKVSLNLMRKHCNSILY 33
           VF  N +  Y SY+ SL + R HC   LY
Sbjct: 100 VFDTNFHVMYTSYRYSLTIHRSHCLHRLY 128


>Z78419-6|CAB01704.1|  487|Caenorhabditis elegans Hypothetical
           protein F26A3.6 protein.
          Length = 487

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 212 IILFISYNLKLW*GTGVIKYQCFNYLFGL 126
           ++ FI YN+ LW   G I +  F Y  GL
Sbjct: 417 LLSFIGYNMALWFTVGHILWSMFWYATGL 445


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,067,608
Number of Sequences: 27780
Number of extensions: 220005
Number of successful extensions: 463
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)