Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325F12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   3.3  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    22   3.3  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    22   3.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   5.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.7  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 109 P*LGFYCLNCIELYKFCFAED 47
           P +G  C  C    K CFA+D
Sbjct: 431 PPIGCECKTCNSKTKCCFAQD 451


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 167 KLNAYPNVLLLTRGNCNTLSLI 102
           KL  YPN    T GNC+ L+ +
Sbjct: 227 KLRPYPNWEWHTVGNCDGLTSV 248


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 168 KIKCLSKCIVIDTWKL*YSVPNWDSIV 88
           ++ C  KCI+I T  +   V  WD  V
Sbjct: 67  RLMCYMKCIMIATKAMKNDVILWDFFV 93


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 168 KIKCLSKCIVIDTWKL*YSVPNWDSIV 88
           ++ C  KCI+I T  +   V  WD  V
Sbjct: 41  RLMCYMKCIMIATKAMKNDVILWDFFV 67


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 37  QWVDLLQNKIYTIQYSLDNRIPIRDRVLQFPRVNNNTF 150
           Q +DL    +Y   +  D  I  ++    F R+ +NTF
Sbjct: 192 QAIDLANTLVYMADHKGDALIVYQNADDSFHRLTSNTF 229


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 290 TEV*LGSGEAISITKVLGGNNIVTFPTVHNMV 195
           TEV +G G   S  +  G     T  TV+  +
Sbjct: 280 TEVTIGGGGTTSSRRTTGSRAAATTTTVYQFI 311


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 290 TEV*LGSGEAISITKVLGGNNIVTFPTVHNMV 195
           TEV +G G   S  +  G     T  TV+  +
Sbjct: 280 TEVTIGGGGTTSSRRTTGSRAAATTTTVYQFI 311


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 290 TEV*LGSGEAISITKVLGGNNIVTFPTVHNMV 195
           TEV +G G   S  +  G     T  TV+  +
Sbjct: 280 TEVTIGGGGTTSSRRTTGSRAAATTTTVYQFI 311


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,598
Number of Sequences: 438
Number of extensions: 3740
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)