Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325F10f
(390 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0683 + 10363963-10364037,10364112-10364185,10364312-103644... 109 6e-25
05_03_0610 - 16167557-16167679,16168236-16168418,16169291-161694... 96 8e-21
02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679 63 7e-11
02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168 29 0.99
09_06_0225 - 21670861-21670887,21671340-21672021,21672041-21672852 29 1.3
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 29 1.7
04_01_0483 + 6343599-6343778,6343886-6344011,6344096-6344173,634... 29 1.7
04_01_0480 + 6279576-6279755,6279863-6279988,6280074-6280151,628... 29 1.7
03_02_0488 - 8824980-8825267,8825364-8827775 29 1.7
02_01_0237 - 1570395-1571225,1572225-1572245,1572336-1572506,157... 28 2.3
04_01_0485 + 6389646-6389665,6390063-6390123,6390231-6390356,639... 28 3.0
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 28 3.0
11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,778... 27 5.3
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 27 5.3
01_01_0823 - 6407635-6407731,6407786-6407857,6409766-6409872 27 5.3
11_02_0078 - 8074247-8074837,8075815-8076341,8076453-8077022,807... 26 9.2
11_02_0063 + 7916048-7917135,7917225-7918690,7920177-7920238,792... 26 9.2
10_08_0058 + 14521922-14522779 26 9.2
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 26 9.2
01_05_0012 + 17147764-17148141,17148316-17148465,17149360-171497... 26 9.2
>03_02_0683 +
10363963-10364037,10364112-10364185,10364312-10364435,
10365047-10365229,10365478-10365600
Length = 192
Score = 109 bits (263), Expect = 6e-25
Identities = 58/123 (47%), Positives = 86/123 (69%), Gaps = 2/123 (1%)
Frame = +2
Query: 23 EEIIKASGAEADSFETSISQALVELET-NSDLKAQLRELYITKAKEIELH-NKKSIIIYV 196
++I K G E FE S++QA +LE N +LK++L++LYI A ++++ N+K+++I+V
Sbjct: 6 KKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKAVVIHV 65
Query: 197 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 376
P KAF+KI +RLVRELEKKFSGK VV V R+I+ P + V +RPR+RTLT+
Sbjct: 66 PYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAV----QRPRTRTLTA 121
Query: 377 VYD 385
V+D
Sbjct: 122 VHD 124
>05_03_0610 -
16167557-16167679,16168236-16168418,16169291-16169414,
16169514-16169626,16169668-16169742
Length = 205
Score = 96.3 bits (229), Expect = 8e-21
Identities = 53/104 (50%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Frame = +2
Query: 80 QALVELET-NSDLKAQLRELYITKAKEIELH-NKKSIIIYVPMPKLKAFQKIQIRLVREL 253
QA +LE N +LK+ L++LYI A +++L N+K++IIYVP KA++KI +RLVREL
Sbjct: 38 QAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKAVIIYVPYRLRKAYKKIHVRLVREL 97
Query: 254 EKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYD 385
EKKFSGK VV V R+I+ P + V RPR+RTLT+V+D
Sbjct: 98 EKKFSGKDVVLVATRRIVRPPKKGSAVV----RPRTRTLTAVHD 137
>02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679
Length = 129
Score = 63.3 bits (147), Expect = 7e-11
Identities = 36/84 (42%), Positives = 54/84 (64%)
Frame = +2
Query: 134 LYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPK 313
+Y+ ++ N K ++I+V KAF+KI +RLV+ELEKKFSGK VVF R+I+ +
Sbjct: 31 MYVCSQMDVAA-NWKVVVIHVLYHLCKAFKKIHVRLVKELEKKFSGKDVVFDATRRIV-R 88
Query: 314 PSHKTRVANKQKRPRSRTLTSVYD 385
P +K + PR+RTL +V+D
Sbjct: 89 PLNKGSAVH---HPRTRTLITVHD 109
>02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168
Length = 336
Score = 29.5 bits (63), Expect = 0.99
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 348 FCLLATRVLWLGLGRILRSPTKTTCLPLNFFSSSRTSLI 232
F L A+ L L L +L T CLPL FF+ + SL+
Sbjct: 4 FSLFASLSLSLSLSFVLADITDNPCLPLIFFAGNLISLM 42
>09_06_0225 - 21670861-21670887,21671340-21672021,21672041-21672852
Length = 506
Score = 29.1 bits (62), Expect = 1.3
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 20 HEEIIKASGA-EADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 196
HEE +KA EAD F T + A + + D+K +L + A +IE ++ Y+
Sbjct: 74 HEEKLKAQARKEADKFWTEAAGAANKAQALQDMKEWYMQLLVNHAFDIEGIPERIKEAYI 133
Query: 197 PMPKLKAFQKIQIRLVRELEKKF 265
KL ++ +EKKF
Sbjct: 134 REIKL---DDEELMFKNHVEKKF 153
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 17 RHEEIIKASGAEADSFET--SISQALVELETNSDLKAQLRELYITKAKEIELHN 172
R E+ +K + E D E ISQAL L + S + + +E KEIEL+N
Sbjct: 562 REEKELKKAKVEHDRKEQLCDISQALAVLASASSVAKERQEFLNLVNKEIELYN 615
>04_01_0483 +
6343599-6343778,6343886-6344011,6344096-6344173,
6344859-6344984,6345253-6345354,6345425-6345571,
6345861-6345984,6346992-6347152
Length = 347
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/45 (22%), Positives = 23/45 (51%)
Frame = +2
Query: 86 LVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 220
LVE+ D ++ + Y+ + L++K +++Y+ K+ F
Sbjct: 113 LVEIRAGGDNMDKMYKFYVYPPHRVRLYSKDDVLLYIKEMKISGF 157
>04_01_0480 +
6279576-6279755,6279863-6279988,6280074-6280151,
6280847-6280972,6281244-6281345,6281416-6281490,
6281852-6281975,6283005-6283107,6283546-6283617,
6283662-6283788,6284125-6284180,6284438-6284453
Length = 394
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 86 LVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 220
LVE+ D ++ + Y+ + L +K ++IY+ K+ F
Sbjct: 113 LVEIRAGGDNMDKMYKFYVYPPNRVRLFSKDDVLIYIKEMKISGF 157
>03_02_0488 - 8824980-8825267,8825364-8827775
Length = 899
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 35 KASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIY-VPMPKL 211
++SG + FET +S A++E+E N+ L + +K+I H++ I Y P+P +
Sbjct: 305 QSSGVTGEVFETLVSSAVMEMERNASLSP------VGFSKDIGQHHEFPRIPYSCPLPIM 358
Query: 212 KAFQKI 229
+ +++
Sbjct: 359 DSSEEL 364
>02_01_0237 -
1570395-1571225,1572225-1572245,1572336-1572506,
1572942-1573070,1574364-1574657
Length = 481
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 87 SACEIEVSKESASAPLALMISSCR 16
++C+I+ SK AP AL I SCR
Sbjct: 190 NSCKIDRSKPCKGAPTALTIDSCR 213
>04_01_0485 +
6389646-6389665,6390063-6390123,6390231-6390356,
6390441-6390518,6391304-6391429,6391630-6391731,
6391802-6391948,6392237-6392360,6393608-6393737,
6393908-6394130
Length = 378
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/45 (22%), Positives = 22/45 (48%)
Frame = +2
Query: 86 LVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 220
LVE+ D ++ + Y+ + L +K +++Y+ K+ F
Sbjct: 80 LVEIRAGGDNMDKMYKFYVYPPNRVRLFSKDDVLLYIKEMKISGF 124
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 27.9 bits (59), Expect = 3.0
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 23 EEIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 202
E+ ++ S E +SF S+ + + + D L + Y KEI N+ ++ + +
Sbjct: 532 EQELEQSRKEIESFHLSLQDEMAKRKQAEDALCSLEKQYAQSQKEI---NRLTLDMEMAN 588
Query: 203 PKLKAFQKIQIRL---VRELEKKFSGKHV 280
+L F +++ L V EL+K+ + V
Sbjct: 589 DRLNDFNLVRLNLENTVCELKKEVTSLEV 617
>11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,
7782225-7782324,7782720-7782801,7782928-7782940,
7783621-7783681
Length = 1433
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -3
Query: 358 AWPLLFVSNTGFVAGLRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQF 206
AW L +S++ ++ L +S KD+M +L FE D+P + F
Sbjct: 1167 AWKSLAISSSAMLS-----LMLSIKDFMLPEKLCFEQYDEPSITFQSSANF 1212
>03_02_0568 +
9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.1 bits (57), Expect = 5.3
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +2
Query: 5 LVPNRHEEIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 184
LV E I SGA + + S L +L + Q ++YITK +++ +K+
Sbjct: 314 LVDLAGSENIARSGAREANQKVCKSVILKDLYQEMERMKQGSQVYITKLSDVKAAREKN- 372
Query: 185 IIYVPMPKLKAFQKIQIRLVRE 250
IY+P + A ++ + + +R+
Sbjct: 373 GIYIPQERF-ALEEAEKKTMRD 393
>01_01_0823 - 6407635-6407731,6407786-6407857,6409766-6409872
Length = 91
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 83 ALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIY 193
A++E+E N DL + L T+ E H + S++IY
Sbjct: 2 AILEIEDNDDLLSLPGSLANTRIGESPSHQRDSLLIY 38
>11_02_0078 -
8074247-8074837,8075815-8076341,8076453-8077022,
8077725-8077752
Length = 571
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 354 GLFCLLATRVLWLGLG 307
GL+ +LA R+LWL +G
Sbjct: 517 GLYTVLAPRILWLAIG 532
>11_02_0063 + 7916048-7917135,7917225-7918690,7920177-7920238,
7921808-7922407
Length = 1071
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 354 GLFCLLATRVLWLGLGRILRS 292
GL+ +LA R+LWL +G L S
Sbjct: 1017 GLYTVLAPRLLWLAIGICLLS 1037
>10_08_0058 + 14521922-14522779
Length = 285
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 93 NSKPTPTSKPNFGSFTLQKLKKLNYTIRSRSSSMCRC 203
+S TPT+ P FT+ L +L S SS C C
Sbjct: 18 SSTTTPTATPPRAQFTVSLLDELGRPGWSYRSSSCTC 54
>07_03_0011 +
12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -1
Query: 180 DFLLCSSISLAFVM*SSRSWALRSELVSSSTSACEIEVSKESASAPLAL--MISSCRFGT 7
DFLL S+ ++ +++W + + S +++ ++ A + MI C+ G
Sbjct: 382 DFLLSGSVDKTAIVWDTKTWECKQQFEFHSAPTLDVDWRNNNSFATCSTDNMIYVCKIGD 441
Query: 6 RR 1
+R
Sbjct: 442 QR 443
>01_05_0012 +
17147764-17148141,17148316-17148465,17149360-17149729,
17149898-17150015,17150121-17150226,17150326-17150418,
17150498-17150593,17151169-17151891,17152012-17152160,
17153434-17153520,17153541-17153625
Length = 784
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +2
Query: 5 LVPNRHEEIIKASGAEADSF-ETSI----SQALVELETNS 109
L+P HEEI K+SG D F E I AL +L+T +
Sbjct: 644 LIPTGHEEIQKSSGIPDDPFIEEKIYYQLQDALAKLDTRT 683
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,081,339
Number of Sequences: 37544
Number of extensions: 189655
Number of successful extensions: 579
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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