Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325F07f
(507 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 232 5e-61
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 232 5e-61
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 232 5e-61
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 232 5e-61
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 110 3e-24
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 99 4e-21
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 50 4e-06
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 50 4e-06
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 31 2.3
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 31 2.3
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 31 2.3
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 31 2.3
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 31 2.3
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 31 2.3
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 31 2.3
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 31 2.3
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 31 2.3
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 31 2.3
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 31 2.3
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 31 2.3
BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for IM... 30 5.3
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 5.3
AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein. 30 5.3
AK126054-1|BAC86416.1| 926|Homo sapiens protein ( Homo sapiens ... 29 7.1
M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation fa... 29 9.3
AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein. 29 9.3
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 232 bits (568), Expect = 5e-61
Identities = 105/128 (82%), Positives = 122/128 (95%)
Frame = -3
Query: 505 AXAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHV 326
A AVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+ VDIRV VKGGGHV
Sbjct: 19 ATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHV 78
Query: 325 AQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 146
AQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGAR
Sbjct: 79 AQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGAR 138
Query: 145 ARYQKSYR 122
ARYQKSYR
Sbjct: 139 ARYQKSYR 146
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 232 bits (568), Expect = 5e-61
Identities = 105/128 (82%), Positives = 122/128 (95%)
Frame = -3
Query: 505 AXAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHV 326
A AVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+ VDIRV VKGGGHV
Sbjct: 19 ATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHV 78
Query: 325 AQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 146
AQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGAR
Sbjct: 79 AQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGAR 138
Query: 145 ARYQKSYR 122
ARYQKSYR
Sbjct: 139 ARYQKSYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 232 bits (568), Expect = 5e-61
Identities = 105/128 (82%), Positives = 122/128 (95%)
Frame = -3
Query: 505 AXAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHV 326
A AVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+ VDIRV VKGGGHV
Sbjct: 19 ATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHV 78
Query: 325 AQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 146
AQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGAR
Sbjct: 79 AQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGAR 138
Query: 145 ARYQKSYR 122
ARYQKSYR
Sbjct: 139 ARYQKSYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 232 bits (568), Expect = 5e-61
Identities = 105/128 (82%), Positives = 122/128 (95%)
Frame = -3
Query: 505 AXAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHV 326
A AVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+ VDIRV VKGGGHV
Sbjct: 19 ATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHV 78
Query: 325 AQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 146
AQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGAR
Sbjct: 79 AQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGAR 138
Query: 145 ARYQKSYR 122
ARYQKSYR
Sbjct: 139 ARYQKSYR 146
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 110 bits (264), Expect = 3e-24
Identities = 48/70 (68%), Positives = 61/70 (87%)
Frame = -3
Query: 505 AXAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHV 326
A AVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+ VDIRV VKGGGHV
Sbjct: 19 ATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHV 78
Query: 325 AQVYAIRQAI 296
AQ+Y Q +
Sbjct: 79 AQIYGESQEL 88
Score = 30.7 bits (66), Expect = 3.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 279 PSTRNM*TKPQRRKSKTS*YNTIGVCW 199
P TRNM + RR+SKTS + G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 99 bits (238), Expect = 4e-21
Identities = 52/96 (54%), Positives = 66/96 (68%)
Frame = -3
Query: 505 AXAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHV 326
A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +DI V VKG GHV
Sbjct: 30 AIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGMDIHVRVKGSGHV 89
Query: 325 AQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 218
Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 90 VQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 50.4 bits (115), Expect = 4e-06
Identities = 43/123 (34%), Positives = 57/123 (46%)
Frame = -3
Query: 505 AXAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHV 326
A A+ Y K G G ++VNG L P + Q + Q ++ D+ TV GGG
Sbjct: 281 AEAIVY-KHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTVSGGGRS 338
Query: 325 AQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 146
AQ AIR A++KAL +F + DE LL DPR E KK G GAR
Sbjct: 339 AQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKPGQEGAR 388
Query: 145 ARY 137
++
Sbjct: 389 RKF 391
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 50.4 bits (115), Expect = 4e-06
Identities = 43/123 (34%), Positives = 57/123 (46%)
Frame = -3
Query: 505 AXAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHV 326
A A+ Y K G G ++VNG L P + Q + Q ++ D+ TV GGG
Sbjct: 187 AEAIVY-KHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTVSGGGRS 244
Query: 325 AQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 146
AQ AIR A++KAL +F + DE LL DPR E KK G GAR
Sbjct: 245 AQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKPGQEGAR 294
Query: 145 ARY 137
++
Sbjct: 295 RKF 297
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 191
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 191
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 191
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 191
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.1 bits (67), Expect = 2.3
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -3
Query: 433 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 257
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.1 bits (67), Expect = 2.3
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -3
Query: 433 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 257
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 191
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 191
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 191
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 191
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 191
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 191
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
>BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for
IMAGE:6451327) protein.
Length = 204
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 253 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 170
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 253 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 170
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 253 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 170
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AK126054-1|BAC86416.1| 926|Homo sapiens protein ( Homo sapiens
cDNA FLJ44066 fis, clone TESTI4036909, weakly similar
to Regulator of nonsense transcripts 1. ).
Length = 926
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = -3
Query: 466 LRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKA 287
L P + R+ + K P KF ++ + T+K + QV+ + + + A
Sbjct: 385 LLTTSSPTIVSNKRVSKRKFIPPAFTNVSTKFELLSLGATLKLASELIQVHKLNKDQATA 444
Query: 286 LIAFYQKYVDEASKKEIKDI 227
LI Q S +E+K++
Sbjct: 445 LIQIAQMMASHESIEEVKEL 464
>M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation
factor 1 protein.
Length = 372
Score = 29.1 bits (62), Expect = 9.3
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -3
Query: 229 ILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFKKTIGWYR 89
+LV D L +A PRR EP GGPG R ++ Y +F++ +GW+R
Sbjct: 236 LLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
>AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein.
Length = 372
Score = 29.1 bits (62), Expect = 9.3
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -3
Query: 229 ILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFKKTIGWYR 89
+LV D L +A PRR EP GGPG R ++ Y +F++ +GW+R
Sbjct: 236 LLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,726,665
Number of Sequences: 237096
Number of extensions: 1486791
Number of successful extensions: 3289
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3285
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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