Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325F06f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0530 + 10285844-10287217                                         29   3.0  
09_06_0137 - 21080263-21081894                                         27   6.9  

>09_02_0530 + 10285844-10287217
          Length = 457

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 519 HHLFPTLDHAVLPYLYPVFLDLCQKY 442
           HHLFP L    L  + P   DLC+K+
Sbjct: 384 HHLFPRLPRCHLRKVSPFVRDLCKKH 409


>09_06_0137 - 21080263-21081894
          Length = 543

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 519 HHLFPTLDHAVLPYLYPVFLDLCQKY 442
           HH+ P+L    LP LY   +DL  K+
Sbjct: 132 HHVLPSLPPDSLPALYAAMIDLLAKH 157


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,100,416
Number of Sequences: 37544
Number of extensions: 151536
Number of successful extensions: 239
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)