Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325F04f
(503 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 3e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 7e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 7e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 7e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 48 7e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 47 1e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 47 1e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 2e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 4e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 45 5e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 45 5e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 45 5e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 45 5e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 45 5e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 7e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 1e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 43 2e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 43 2e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 2e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 35 6e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 35 6e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 33 0.001
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.084
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.45
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 0.59
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 3.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 4.2
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 5.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 5.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 5.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 5.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.5
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 7.3
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 7.3
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 9.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 9.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 9.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 9.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.0 bits (119), Expect = 3e-09
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +3
Query: 39 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 197
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 198 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 371
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 372 VSNNGSVSW 398
+ G V W
Sbjct: 127 LHYTGKVLW 135
Score = 23.8 bits (49), Expect = 1.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 448 WPNDMQTCTFKFGS 489
+P D QTC KFGS
Sbjct: 152 FPFDQQTCFMKFGS 165
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.6 bits (108), Expect = 7e-08
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +3
Query: 84 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 248
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 249 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 401
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.6 bits (108), Expect = 7e-08
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +3
Query: 84 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 248
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 249 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 401
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.6 bits (108), Expect = 7e-08
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +3
Query: 57 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 215
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 216 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 389
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 390 VSW 398
V W
Sbjct: 137 VEW 139
Score = 24.6 bits (51), Expect = 0.59
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 433 MQLDNWPNDMQTCTFKFGS 489
+ ++ +P D QTC KFGS
Sbjct: 151 IDVEYFPFDEQTCVMKFGS 169
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.6 bits (108), Expect = 7e-08
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Frame = +3
Query: 27 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 185
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 186 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 362
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 363 ----RARVSNNGSVSW 398
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
Score = 23.8 bits (49), Expect = 1.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 433 MQLDNWPNDMQTCTFKFGS 489
+ ++ +P D QTC KFGS
Sbjct: 147 IDVEYFPFDEQTCFMKFGS 165
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.8 bits (106), Expect = 1e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 347
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWI 401
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.8 bits (106), Expect = 1e-07
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Frame = +3
Query: 84 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 248
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 249 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 398
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 433 MQLDNWPNDMQTCTFKFGS 489
+ ++ +P D Q+C KFGS
Sbjct: 160 INVEYFPFDEQSCIMKFGS 178
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.0 bits (104), Expect = 2e-07
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +3
Query: 84 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 248
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 249 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 398
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 24.6 bits (51), Expect = 0.59
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 433 MQLDNWPNDMQTCTFKFGS 489
+ ++ +P D QTC KFGS
Sbjct: 155 IDVEYFPFDEQTCVLKFGS 173
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 4e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +3
Query: 57 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 221
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 222 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 323
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = +1
Query: 448 WPNDMQTCTFKFGSRMH 498
WP D+ CT S H
Sbjct: 166 WPYDILNCTIHIASWSH 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.8 bits (101), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 347
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWI 401
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.8 bits (101), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 347
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWI 401
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.8 bits (101), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 347
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWI 401
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.8 bits (101), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 347
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWI 401
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.8 bits (101), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 347
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWI 401
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 20.6 bits (41), Expect = 9.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 433 MQLDNWPNDMQTCTFKFGS 489
M + +P D Q C KFGS
Sbjct: 113 MDIAWFPFDDQHCDMKFGS 131
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.4 bits (100), Expect = 7e-07
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Frame = +3
Query: 36 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 200
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 201 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 374
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 375 SNNGSVSWI 401
NNG+ ++
Sbjct: 131 KNNGTCLYV 139
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 448 WPNDMQTCTFKFGS 489
+P D Q C KFGS
Sbjct: 155 FPFDDQRCEMKFGS 168
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 43.6 bits (98), Expect = 1e-06
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +3
Query: 138 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 314
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 315 VVLLNAAATTAGDYALRAR--VSNNGSVSWI 401
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.2 bits (97), Expect = 2e-06
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +3
Query: 135 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 308
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 309 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 401
PD+VL N A G+Y +R + + NG V W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 24.2 bits (50), Expect = 0.78
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 448 WPNDMQTCTFKFGS 489
+P D QTC KFGS
Sbjct: 158 FPFDQQTCIMKFGS 171
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.2 bits (97), Expect = 2e-06
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +3
Query: 84 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 248
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 249 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 398
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 25.0 bits (52), Expect = 0.45
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 430 SMQLDNWPNDMQTCTFKFGS 489
S+ ++ +P D+QTC K GS
Sbjct: 154 SIDVEFFPYDVQTCVLKLGS 173
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.7 bits (96), Expect = 2e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 63 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 230
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 231 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 329
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 27.9 bits (59), Expect = 0.063
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 403 SAWTLALQISMQLDNWPNDMQTCTFKFGS 489
S T+ M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.7 bits (76), Expect = 6e-04
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Frame = +3
Query: 72 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 236
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 237 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 407
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 408 LDI 416
L I
Sbjct: 156 LTI 158
Score = 25.0 bits (52), Expect = 0.45
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1
Query: 355 TLSAPVYLITAPSPG*SAWTLALQIS----MQLDNWPNDMQTCTFKFGS 489
T++ P L+ G +++ L I M+L N+P D Q+C GS
Sbjct: 134 TITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.7 bits (76), Expect = 6e-04
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Frame = +3
Query: 63 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 230
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 231 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 383
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 384 GSVSWIKRLDIS 419
GS++ RL I+
Sbjct: 124 GSITRSIRLTIT 135
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 33.5 bits (73), Expect = 0.001
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +3
Query: 63 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 230
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 231 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 383
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 384 GSVSWIKRLDIS 419
GS++ RL I+
Sbjct: 124 GSITRSIRLTIT 135
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 27.5 bits (58), Expect = 0.084
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 403 SAWTLALQISMQLDNWPNDMQTCTFKFGSRMH 498
S TL L +M+ +++P+D Q C+ S H
Sbjct: 124 SKLTLVLSCAMKFESYPHDTQICSMMIESLSH 155
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.45
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 3 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 107
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.6 bits (51), Expect = 0.59
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 445 NWPNDMQTCTFKFGSRMH 498
+WP D C FGS +H
Sbjct: 175 SWPYDTHRCRINFGSWVH 192
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 412 TLALQISMQLDNWPNDMQTCTFKFGSRMH 498
TL L +M +P+D Q C + S H
Sbjct: 158 TLKLSCAMNFLIYPHDTQECKLQMESLSH 186
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 294 ERLWRPDVVLLNAAATT 344
+ +WRPD NA + T
Sbjct: 116 KNMWRPDSFFKNAKSVT 132
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 281 PSAAAPFPCVPTQS 240
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 279 KCCSPIPLRSNSVVCRSNSFE 217
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 279 KCCSPIPLRSNSVVCRSNSFE 217
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 279 KCCSPIPLRSNSVVCRSNSFE 217
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 279 KCCSPIPLRSNSVVCRSNSFE 217
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLGSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 279 KCCSPIPLRSNSVVCRSNSFE 217
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 279 KCCSPIPLRSNSVVCRSNSFE 217
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 279 KCCSPIPLRSNSVVCRSNSFE 217
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 279 KCCSPIPLRSNSVVCRSNSFE 217
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.0 bits (42), Expect = 7.3
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +3
Query: 138 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 299
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 300 LWRPDVVLLNA 332
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 101 RNVRSGVSPRLQNRS 145
R R +SPR++NRS
Sbjct: 729 RQHRDSLSPRVENRS 743
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 20.6 bits (41), Expect = 9.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 288 TPAKCCSPIPLRSNSVVCRSNSFED 214
TP + + PL + V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 357 ALRARVSNNGSVSWIK 404
ALR N G ++W K
Sbjct: 240 ALRCLAHNGGEIAWTK 255
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 357 ALRARVSNNGSVSWIK 404
ALR N G ++W K
Sbjct: 240 ALRCLAHNGGEIAWTK 255
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 357 ALRARVSNNGSVSWIK 404
ALR N G ++W K
Sbjct: 240 ALRCLAHNGGEIAWTK 255
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,987
Number of Sequences: 438
Number of extensions: 3432
Number of successful extensions: 71
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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