Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325F02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011368-1|AAR96160.1|  943|Drosophila melanogaster RE64037p pro...    28   8.8  
AY058743-1|AAL13972.1|  769|Drosophila melanogaster LP08544p pro...    28   8.8  
AE013599-148|AAM68345.1|  878|Drosophila melanogaster CG7843-PB,...    28   8.8  
AE013599-147|AAM68344.1|  943|Drosophila melanogaster CG7843-PD,...    28   8.8  
AE013599-146|AAM68343.1|  943|Drosophila melanogaster CG7843-PC,...    28   8.8  
AE013599-145|AAF57281.2|  943|Drosophila melanogaster CG7843-PA,...    28   8.8  

>BT011368-1|AAR96160.1|  943|Drosophila melanogaster RE64037p
           protein.
          Length = 943

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = +3

Query: 291 YKISNLLLIYTHPALSRSE*EVLCH*FNNFLRAS 392
           ++ S++ L    P+++RSE E +C+ F+ +LR +
Sbjct: 512 HRTSSIFLRNLAPSITRSEIEAVCNRFSGYLRVA 545


>AY058743-1|AAL13972.1|  769|Drosophila melanogaster LP08544p
           protein.
          Length = 769

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = +3

Query: 291 YKISNLLLIYTHPALSRSE*EVLCH*FNNFLRAS 392
           ++ S++ L    P+++RSE E +C+ F+ +LR +
Sbjct: 338 HRTSSIFLRNLAPSITRSEIEAVCNRFSGYLRVA 371


>AE013599-148|AAM68345.1|  878|Drosophila melanogaster CG7843-PB,
           isoform B protein.
          Length = 878

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = +3

Query: 291 YKISNLLLIYTHPALSRSE*EVLCH*FNNFLRAS 392
           ++ S++ L    P+++RSE E +C+ F+ +LR +
Sbjct: 508 HRTSSIFLRNLAPSITRSEIEAVCNRFSGYLRVA 541


>AE013599-147|AAM68344.1|  943|Drosophila melanogaster CG7843-PD,
           isoform D protein.
          Length = 943

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = +3

Query: 291 YKISNLLLIYTHPALSRSE*EVLCH*FNNFLRAS 392
           ++ S++ L    P+++RSE E +C+ F+ +LR +
Sbjct: 512 HRTSSIFLRNLAPSITRSEIEAVCNRFSGYLRVA 545


>AE013599-146|AAM68343.1|  943|Drosophila melanogaster CG7843-PC,
           isoform C protein.
          Length = 943

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = +3

Query: 291 YKISNLLLIYTHPALSRSE*EVLCH*FNNFLRAS 392
           ++ S++ L    P+++RSE E +C+ F+ +LR +
Sbjct: 512 HRTSSIFLRNLAPSITRSEIEAVCNRFSGYLRVA 545


>AE013599-145|AAF57281.2|  943|Drosophila melanogaster CG7843-PA,
           isoform A protein.
          Length = 943

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = +3

Query: 291 YKISNLLLIYTHPALSRSE*EVLCH*FNNFLRAS 392
           ++ S++ L    P+++RSE E +C+ F+ +LR +
Sbjct: 512 HRTSSIFLRNLAPSITRSEIEAVCNRFSGYLRVA 545


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,135,688
Number of Sequences: 53049
Number of extensions: 378206
Number of successful extensions: 476
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)