Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325E11f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 33 0.18
11_04_0460 - 17955102-17955146,17955253-17955310,17955442-179555... 31 0.56
03_03_0233 - 15656930-15656998,15657459-15657591,15657677-156577... 30 1.3
12_01_0089 - 707260-707317,707626-708050,708663-709621,710223-71... 29 1.7
03_03_0230 - 15623648-15623653,15624333-15624383,15624477-156245... 29 1.7
06_03_1325 - 29334401-29334859,29335163-29335857,29336538-293367... 29 2.3
03_02_1008 - 13170630-13171481 29 3.0
06_01_0883 + 6768998-6769381,6769518-6769616,6769664-6769726,677... 28 4.0
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 28 4.0
02_05_1027 - 33602170-33602622,33602912-33603013 28 4.0
07_03_1659 - 28432628-28433092 28 5.2
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141... 28 5.2
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 28 5.2
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338... 28 5.2
12_02_1136 - 26381025-26381408,26381661-26381804,26382345-263824... 27 6.9
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 27 6.9
02_05_1096 + 34089572-34089880,34090405-34090470,34090723-340909... 27 6.9
10_02_0144 + 5815403-5815520,5815551-5816314 27 9.1
06_03_0611 - 22721977-22722276,22722765-22722853,22722978-227230... 27 9.1
05_04_0235 + 19291204-19291769,19291860-19292250 27 9.1
03_04_0214 + 18688480-18688832,18688956-18688999,18689039-186891... 27 9.1
02_01_0008 - 50576-50671,50767-50829,50918-50961,51048-51129,522... 27 9.1
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = +3
Query: 294 PHL*NSRSPNSNMLSV*HRAPSEHY--RPGIA*ERNSALAFHRSNV-----RARLRPPTC 452
P L + R P+S+ + HRA + H RP + A R+NV RAR PP
Sbjct: 2 PLLLHPRFPSSHAAACAHRAAAAHRDARPALRLPELHATRRRRNNVACRATRAREAPPQQ 61
Query: 453 RYAARSPSQPSHCYEDH 503
+ A + S+ +H Y DH
Sbjct: 62 QNTAAALSKEAHKYFDH 78
>11_04_0460 -
17955102-17955146,17955253-17955310,17955442-17955593,
17955888-17955993,17956101-17956222,17956766-17956834,
17956969-17957214,17957331-17957373,17957449-17957520,
17957954-17958066,17958158-17958238,17958343-17958415,
17959413-17959519,17960410-17960514,17960684-17960974,
17961621-17961707,17961774-17961842,17961917-17961973,
17962057-17962155,17962223-17962312,17962395-17962511,
17964164-17964244,17964353-17964502,17964812-17964956,
17967359-17967510,17967647-17967784,17967838-17967914,
17968032-17968134
Length = 1015
Score = 31.1 bits (67), Expect = 0.56
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 399 ALAFHRSNVRARLRPPTCRYAARS 470
A AF + ++ +RPPTCRYA RS
Sbjct: 443 AFAFIVATLKDPMRPPTCRYALRS 466
>03_03_0233 -
15656930-15656998,15657459-15657591,15657677-15657729,
15658640-15658690,15658790-15658859,15659009-15659223,
15660465-15660570,15660686-15660753,15660861-15661148,
15661253-15661408,15661450-15661544,15661632-15661788
Length = 486
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 254 VRRQFHLVWWQFKSPARMTESPMP 183
VR + HL WW +KSP R + P
Sbjct: 50 VRPKAHLFWWYYKSPQRASSPGKP 73
>12_01_0089 -
707260-707317,707626-708050,708663-709621,710223-710408,
710502-710604,710701-710883,710932-711012,711072-711164,
711650-711832,713751-713966
Length = 828
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +3
Query: 27 GPARCPSRYSLALTYRGVSVPYLADGT----PADRHRIRLSPPGQAPPEQ*HRITVRHGR 194
GPA CP Y + TY + + A GT P SP G+ + H ++ H R
Sbjct: 635 GPAPCPPGYLIMRTYSQIDDSHRARGTGTYFPNPNLSKDRSPSGRGGRGKTHFLSHNHQR 694
Query: 195 LCHPGR 212
H GR
Sbjct: 695 PHHYGR 700
>03_03_0230 -
15623648-15623653,15624333-15624383,15624477-15624546,
15624646-15624848,15625011-15625116,15625228-15625295,
15625410-15625453,15628360-15628602,15629482-15629691,
15630207-15630287,15630289-15630355,15632167-15632386,
15632534-15632646,15634322-15634416,15634509-15634629
Length = 565
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 320 GGPTISKVRSSINASRRLPLTFVRRQFHLVWWQFKSPARMTESPMP 183
GG + + + S R VR + HL WW ++SP R + P
Sbjct: 16 GGGVAAISGGTNDGSERWGYVQVRPKAHLFWWYYRSPHRASSPGKP 61
>06_03_1325 -
29334401-29334859,29335163-29335857,29336538-29336750,
29338791-29339472,29339781-29340020
Length = 762
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 91 ISLTGHQPIVIASVYLPPDKPLL-----SSDIESLFGMGDSVILAGD--LNCHH 231
++L QP++ A+ PP PL + DIE FG+G + L+ D L C H
Sbjct: 13 LALLALQPLIAAASRRPPPSPLCPKKCGNVDIEYPFGIGPNCSLSDDFSLECVH 66
>03_02_1008 - 13170630-13171481
Length = 283
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 148 KPLLSSDIESLFGMGDSVILAGDLNCHHTRWNCRRTNVNGRR 273
+P + SD+E FG G ++ G L H + N +NGRR
Sbjct: 86 RPNIFSDLEMEFGSGPWLLFRGQLPGHLSEDNGFDVFINGRR 127
>06_01_0883 +
6768998-6769381,6769518-6769616,6769664-6769726,
6770883-6770931,6771338-6771405,6771463-6771715,
6772244-6772380,6772708-6772821,6773059-6773258,
6773367-6773561,6773650-6773812
Length = 574
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 472 GDRAA*RQVGGLSRALTLLRWNASAEL 392
G AA R GG S L LLRW +SAEL
Sbjct: 12 GAAAAVRWRGGESLLLLLLRWPSSAEL 38
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 154 LLSSDIESLFGMGDSVILAGDLNCHHTRWNCRRTNVN-GRRLDAFIDDLT 300
+L S +E + D + AG +NC H + C++ V+ G+ FI T
Sbjct: 238 VLESVVEDVARSLDGALRAGKVNCDHEKALCKKAGVSIGKSARLFIYSYT 287
>02_05_1027 - 33602170-33602622,33602912-33603013
Length = 184
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 441 PPTCRYAARSPSQPS-HCYEDHGGLE 515
PPT Y +R+P Q S H +E HG L+
Sbjct: 124 PPTVEYYSRNPHQNSHHDHEQHGVLK 149
>07_03_1659 - 28432628-28433092
Length = 154
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 9/53 (16%)
Frame = +3
Query: 24 AGPARCPSRYSLALTYRGVSV------PYLADG--TPADR-HRIRLSPPGQAP 155
+GPA CP YSL R + P+L DG DR H + + P Q+P
Sbjct: 27 SGPAACPHAYSLLCRRRSDGIHHLLVDPWLLDGGRRQMDRIHHLLVDPAPQSP 79
>05_04_0284 -
19813179-19813340,19813464-19813748,19813850-19814131,
19814224-19814531,19814654-19814927,19815807-19816175,
19816372-19816434,19817495-19817789,19817818-19818008,
19818123-19818428,19818516-19818638
Length = 885
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +1
Query: 1 GGTAIYY-RRALHVVPLDTPSLSHIE-ASVCRISLTGHQPIVIASVYLPPDKPLLS-SDI 171
GGT ++ RR+L V + + E C+IS GHQ +V + + LS +
Sbjct: 352 GGTTVHVSRRSLSPVAASSTVHAMSELGDTCKISRAGHQSVVAGGTTVHVSRRSLSPAAA 411
Query: 172 ESLFGMGDSVILAGDLNCH 228
S +I G + CH
Sbjct: 412 SSTVHAMSELIAGGGVLCH 430
>05_01_0384 +
2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 61 LSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESLF-GMGDSVILAGDLNC 225
L+ +E +V ++++TG IAS L K L+++ F GD + D C
Sbjct: 229 LTRLEGTVAKVAMTGVLVYWIASAQLGTSKSLINASSPPAFQDPGDLTLFCSDDEC 284
>03_06_0576 +
34832900-34832911,34833006-34833122,34833752-34833810,
34833901-34833960,34834197-34834250,34834332-34834380,
34834493-34834540,34834889-34834954,34835591-34835641,
34835732-34835851,34835921-34836005,34836428-34836509,
34836666-34836774,34837005-34837051,34837131-34837188,
34839114-34839220,34839700-34839765,34839833-34839879,
34839977-34840042,34840146-34840243,34840344-34840469,
34840551-34840835,34840920-34840985,34841079-34841228
Length = 675
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 277 DAFIDDLTFEIVGPPTPTCY 336
D F + FE + PPTPTC+
Sbjct: 530 DCFEGIICFETLNPPTPTCH 549
>12_02_1136 -
26381025-26381408,26381661-26381804,26382345-26382413,
26382537-26382637,26383488-26383493,26383759-26383996
Length = 313
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 9 CHLL*AGPARCPSRYSLALTYRGVSVPYLADGTPADRHRIRLSPPGQAP 155
C L G + PS Y A + G+ PY TP+ R I + P AP
Sbjct: 106 CFELGLGQSVVPSNYPYADQHYGLLSPYGVRPTPSGRILIPPNMPADAP 154
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 85 CRISLTGHQPIVIASVYLPPDKPLLSSDIESLFGMGDSVILAGDLNCHHTRWNCRRTNVN 264
C ++ GH V+A V PD L+S G GD+ + DLN + C+ ++N
Sbjct: 107 CSATIAGHTEAVLA-VSFSPDGRCLAS------GSGDTTVRFWDLNTQTPLFTCKGGSLN 159
>02_05_1096 +
34089572-34089880,34090405-34090470,34090723-34090903,
34091164-34091360,34091484-34091534,34091609-34091700,
34092234-34092246,34092278-34092349,34092970-34093048,
34093092-34093174,34093568-34093711
Length = 428
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 124 ASVYLPPDKPLLSSDIESLFGMGDSVILAGDLNCHH 231
A V +PPD + ++ I G G + +L L HH
Sbjct: 80 AEVMIPPDNRIPATIITGFLGSGKTTLLNHILTAHH 115
>10_02_0144 + 5815403-5815520,5815551-5816314
Length = 293
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 115 SAGVPSARYGTLTPRYVRAREYREGQRAGPAYSKW 11
+AG PS + P +R REG+R GP +W
Sbjct: 165 AAGAPSTATDLVEP----SRRQREGERHGPVLPRW 195
>06_03_0611 -
22721977-22722276,22722765-22722853,22722978-22723083,
22723178-22723306,22723803-22723887,22723994-22724103,
22724424-22724624,22725033-22725394,22725612-22725695,
22725791-22725916,22725999-22726161,22726378-22726536,
22727147-22727274,22727371-22727493,22727755-22727899,
22727992-22728068,22728318-22728696,22729325-22729411
Length = 950
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +1
Query: 178 LFGMGDSVILAGDLNCHHTRWNCRRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALR 357
L+ +G I A + H RW+ + NG R DA I + +V P ++ ++
Sbjct: 509 LYELGQYAIRASEAGSHGMRWSDLNDHANGMR-DALIIIILEWLVLLPVAYYLDHSASVG 567
Query: 358 PSTIDLALLRNV 393
+ L+L++N+
Sbjct: 568 HKSSFLSLIKNL 579
>05_04_0235 + 19291204-19291769,19291860-19292250
Length = 318
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
Frame = -1
Query: 470 RPSC--ITTGRWSESSSDIAS 414
+PSC + TG+W+ SS DIA+
Sbjct: 233 KPSCHDVITGQWTPSSGDIAA 253
>03_04_0214 +
18688480-18688832,18688956-18688999,18689039-18689101,
18689883-18689956,18691526-18692017
Length = 341
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 316 PPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAM 423
P PT + I+ P+T L ++ V +R S+E +
Sbjct: 202 PLVPTIKTFQISTNPTTEGLGIISEVPIRYNSVEVI 237
>02_01_0008 -
50576-50671,50767-50829,50918-50961,51048-51129,
52205-52371,52502-52654,52780-52960,53452-53540,
53599-53799,54804-55147,55397-55626
Length = 549
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 46 LDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSD 168
L TP+LS + S S G P +++++ P +P SSD
Sbjct: 94 LGTPTLSRLSNSFLTNSFRGKTPEILSNLVKPLLRPSSSSD 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,123,436
Number of Sequences: 37544
Number of extensions: 390912
Number of successful extensions: 1156
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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