BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325E11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88966-1|AAC39933.1| 2548|Homo sapiens rapamycin associated prot... 29 9.9
L34075-1|AAA58486.1| 2549|Homo sapiens FKBP-rapamycin associated... 29 9.9
BC117166-1|AAI17167.1| 2549|Homo sapiens FK506 binding protein 1... 29 9.9
AL391561-2|CAI17228.1| 2549|Homo sapiens FK506 binding protein 1... 29 9.9
AL359082-1|CAC42395.1| 895|Homo sapiens dJ576K7.1 (FK506 bindin... 29 9.9
AL109811-7|CAI22105.1| 2549|Homo sapiens FK506 binding protein 1... 29 9.9
AL049653-2|CAI22145.1| 2549|Homo sapiens FK506 binding protein 1... 29 9.9
AJ300188-3|CAC15570.1| 1188|Homo sapiens rapamycin associated pr... 29 9.9
AB209995-1|BAE06077.1| 2583|Homo sapiens FRAP1 variant protein p... 29 9.9
>U88966-1|AAC39933.1| 2548|Homo sapiens rapamycin associated protein
FRAP2 protein.
Length = 2548
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 399 QSYVPKQCQVYSARTERDVIRITCW-SWGTDYFKGEVVYK 283
+S +PK Q YSA TE D W +W F+ + YK
Sbjct: 1765 ESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYK 1804
>L34075-1|AAA58486.1| 2549|Homo sapiens FKBP-rapamycin associated
protein protein.
Length = 2549
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 399 QSYVPKQCQVYSARTERDVIRITCW-SWGTDYFKGEVVYK 283
+S +PK Q YSA TE D W +W F+ + YK
Sbjct: 1766 ESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYK 1805
>BC117166-1|AAI17167.1| 2549|Homo sapiens FK506 binding protein
12-rapamycin associated protein 1 protein.
Length = 2549
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 399 QSYVPKQCQVYSARTERDVIRITCW-SWGTDYFKGEVVYK 283
+S +PK Q YSA TE D W +W F+ + YK
Sbjct: 1766 ESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYK 1805
>AL391561-2|CAI17228.1| 2549|Homo sapiens FK506 binding protein
12-rapamycin associated protein 1 protein.
Length = 2549
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 399 QSYVPKQCQVYSARTERDVIRITCW-SWGTDYFKGEVVYK 283
+S +PK Q YSA TE D W +W F+ + YK
Sbjct: 1766 ESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYK 1805
>AL359082-1|CAC42395.1| 895|Homo sapiens dJ576K7.1 (FK506 binding
protein 12-rapamycin associated protein 1) protein.
Length = 895
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 399 QSYVPKQCQVYSARTERDVIRITCW-SWGTDYFKGEVVYK 283
+S +PK Q YSA TE D W +W F+ + YK
Sbjct: 323 ESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYK 362
>AL109811-7|CAI22105.1| 2549|Homo sapiens FK506 binding protein
12-rapamycin associated protein 1 protein.
Length = 2549
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 399 QSYVPKQCQVYSARTERDVIRITCW-SWGTDYFKGEVVYK 283
+S +PK Q YSA TE D W +W F+ + YK
Sbjct: 1766 ESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYK 1805
>AL049653-2|CAI22145.1| 2549|Homo sapiens FK506 binding protein
12-rapamycin associated protein 1 protein.
Length = 2549
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 399 QSYVPKQCQVYSARTERDVIRITCW-SWGTDYFKGEVVYK 283
+S +PK Q YSA TE D W +W F+ + YK
Sbjct: 1766 ESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYK 1805
>AJ300188-3|CAC15570.1| 1188|Homo sapiens rapamycin associated
protein FRAP2 protein.
Length = 1188
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 399 QSYVPKQCQVYSARTERDVIRITCW-SWGTDYFKGEVVYK 283
+S +PK Q YSA TE D W +W F+ + YK
Sbjct: 405 ESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYK 444
>AB209995-1|BAE06077.1| 2583|Homo sapiens FRAP1 variant protein
protein.
Length = 2583
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 399 QSYVPKQCQVYSARTERDVIRITCW-SWGTDYFKGEVVYK 283
+S +PK Q YSA TE D W +W F+ + YK
Sbjct: 1800 ESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYK 1839
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,630,182
Number of Sequences: 237096
Number of extensions: 1945847
Number of successful extensions: 4609
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4609
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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