Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325E11f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 89 3e-18
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 82 5e-16
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 81 9e-16
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 79 5e-15
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 71 1e-12
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 71 1e-12
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 69 3e-12
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 69 4e-12
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 67 1e-11
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 66 3e-11
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 66 4e-11
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 65 6e-11
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 65 6e-11
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 65 6e-11
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 60 1e-09
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 58 5e-09
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 58 5e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 52 6e-07
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 52 6e-07
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 52 6e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 48 1e-05
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 30 2.2
X76208-2|CAA53801.1| 504|Drosophila melanogaster protein 34-spe... 29 2.9
K02620-1|AAA28967.1| 510|Drosophila melanogaster protein ( D.me... 29 2.9
BT029125-1|ABJ17058.1| 501|Drosophila melanogaster IP16008p pro... 29 2.9
AE014297-1996|AAN13647.2| 501|Drosophila melanogaster CG4898-PF... 29 2.9
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 89.4 bits (212), Expect = 3e-18
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Frame = +1
Query: 1 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESL 180
GGTAI R + + +H++A+ I L + + +A+VY PP +L +
Sbjct: 65 GGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQFLDF 124
Query: 181 F-GMGDSVILAGDLNCHHTRWNCRRTNVNGRRLDAFIDDLTFEI--VGPPTPTCYPYNIA 351
F +G I AGD N HT W R N G++L I T ++ V P +PT +P ++
Sbjct: 125 FQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLN 184
Query: 352 LRPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQLGR-PHN---PVTVTRTMVDW 513
P ID A+ +N++ L E + +L SDH PV++ L R N P +T + +W
Sbjct: 185 KLPDLIDFAVTKNISRSLVKAECLPDLSSDHSPVLIHLRRYAENVKPPTRLTSSKTNW 242
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 81.8 bits (193), Expect = 5e-16
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
Frame = +1
Query: 1 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESL 180
GGT I R + L+ ++++++ + L +A+VY PP P+
Sbjct: 65 GGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGST-TLAAVYCPPRFPISEDQFMEF 123
Query: 181 FG-MGDSVILAGDLNCHHTRWNCRRTNVNGRRLDAFI--DDLTFEIVGPPTPTCYPYNIA 351
F +GD I AGD N HT W R + G++L + + + V P PT +P +
Sbjct: 124 FNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPADPR 183
Query: 352 LRPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVM-QLGRPH---NPVTVTRTMVDW 513
P ID A+ ++V + + EA+++L SDH PV + L RPH P +T +W
Sbjct: 184 KIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNMLTRPHIVDPPYRLTNFRTNW 241
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 81.0 bits (191), Expect = 9e-16
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Frame = +1
Query: 1 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISL-TGHQPIVIASVYLPPDKPLLSSDIES 177
GG+A+ + L PL TP +S + + R+ L T + +A+VYLPP + + D +S
Sbjct: 67 GGSAVIIKSRLCHSPL-TP-ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKS 124
Query: 178 LFG-MGDSVILAGDLNCHHTRWNCRRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIAL 354
+F +G+ I GD N H W R+ G+ L I ++++ PT Y YN L
Sbjct: 125 MFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLL 184
Query: 355 RPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQL 465
PS +D + + ++ + EL SDH P++ L
Sbjct: 185 TPSALDFFITCGYGMGRLDVQTLQELSSDHLPILAVL 221
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 78.6 bits (185), Expect = 5e-15
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 7/178 (3%)
Frame = +1
Query: 1 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESL 180
GGT I R + L+ ++++++ + L +A+VY PP P+
Sbjct: 65 GGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGST-TLAAVYCPPRFPISEDQFMEF 123
Query: 181 FG-MGDSVILAGDLNCHHTRWNCRRTNVNGRRLDAFI--DDLTFEIVGPPTPTCYPYNIA 351
F +GD I AGD N HT W R G++L + + + V P PT +P +
Sbjct: 124 FNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADPR 183
Query: 352 LRPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQLGRPHN----PVTVTRTMVDW 513
P ID A+ ++V + + EA+++L SDH PV + + H+ P +T +W
Sbjct: 184 KIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNMLTRHHIVDPPYRLTNFRTNW 241
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 70.9 bits (166), Expect = 1e-12
Identities = 38/105 (36%), Positives = 55/105 (52%)
Frame = +1
Query: 148 KPLLSSDIESLFGMGDSVILAGDLNCHHTRWNCRRTNVNGRRLDAFIDDLTFEIVGPPTP 327
K L SD+ + + + ++ GD N H W C R N G+ L+ D F I+ P P
Sbjct: 139 KSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQP 198
Query: 328 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQ 462
T P+N + ST+DL L N+ +L + M EL SDH PVV++
Sbjct: 199 TYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVIK 242
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 70.9 bits (166), Expect = 1e-12
Identities = 38/105 (36%), Positives = 55/105 (52%)
Frame = +1
Query: 148 KPLLSSDIESLFGMGDSVILAGDLNCHHTRWNCRRTNVNGRRLDAFIDDLTFEIVGPPTP 327
K L SD+ + + + ++ GD N H W C R N G+ L+ D F I+ P P
Sbjct: 87 KSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQP 146
Query: 328 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQ 462
T P+N + ST+DL L N+ +L + M EL SDH PVV++
Sbjct: 147 TYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVIK 190
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 69.3 bits (162), Expect = 3e-12
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 1/156 (0%)
Frame = +1
Query: 1 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESL 180
GG A++ R L P HI+ S +++ TG + +++Y P + +
Sbjct: 67 GGVAVFVRTTLRHFPQRVIETRHIQLSSVKVA-TGLGDLQFSAIYCSPSTRIEERHFTDI 125
Query: 181 F-GMGDSVILAGDLNCHHTRWNCRRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALR 357
G ++ GD N H W + GR L + +I+ +PT YPY +
Sbjct: 126 IRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHT 185
Query: 358 PSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQL 465
PS ID A+ + L +I +LDSDH P+++ +
Sbjct: 186 PSCIDFAVYHGIPDHLATITQSWDLDSDHLPLIISI 221
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 68.9 bits (161), Expect = 4e-12
Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Frame = +1
Query: 1 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESL 180
GG AI + +L PL + + ++ + I T PI +VY PP + + + +
Sbjct: 66 GGAAILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTTDEFKDI 124
Query: 181 FG-MGDSVILAGDLNCHHTRWNCRRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALR 357
I+AGD N H W R+N G L + + + + PT YPY
Sbjct: 125 LEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGS 184
Query: 358 PSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQL 465
P ID AL + V +I A+ EL SDH P+V+ L
Sbjct: 185 PGYIDFALTKGVLGIHANISAVVELSSDHLPLVITL 220
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 67.3 bits (157), Expect = 1e-11
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Frame = +1
Query: 115 IVIASVYLPPD---KPLLSSDI----ESLFGMGDSVILAGDLNCHHTRWNCRRTNVNGRR 273
IVIASVY PP P +D+ E G +IL GD N H +W C R G
Sbjct: 125 IVIASVYCPPSLSWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAA 184
Query: 274 L-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRP 450
L DA D EIV + T +P++ PS ID ++ + + + I + + L SDH P
Sbjct: 185 LYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSSDHLP 244
Query: 451 VVMQL 465
+++++
Sbjct: 245 ILLEI 249
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 66.1 bits (154), Expect = 3e-11
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Frame = +1
Query: 115 IVIASVYLPPDKPLLS---SDI----ESLFGMGDSVILAGDLNCHHTRWNCRRTNVNGRR 273
IVIASVY PP L +D+ E G IL GD N H +W C R G
Sbjct: 113 IVIASVYCPPSLRWLPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 274 L-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRP 450
L +A D T EI+ T +P++ PS ID ++ + + + I + ++L SDH P
Sbjct: 173 LYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRFEKRISSGADLSSDHLP 232
Query: 451 VVMQLGRPHN 480
+++++ N
Sbjct: 233 ILLEINLDTN 242
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 65.7 bits (153), Expect = 4e-11
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Frame = +1
Query: 115 IVIASVYLPPD---KPLLSSDI----ESLFGMGDSVILAGDLNCHHTRWNCRRTNVNGRR 273
IVIASVY PP P +D+ E G IL GD N H +W C R G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 274 L-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRP 450
L +A D EI+ T +P++ PS ID ++ + + + I ++++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSVADLSSDHLP 232
Query: 451 VVMQL 465
+++++
Sbjct: 233 ILLEI 237
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 64.9 bits (151), Expect = 6e-11
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 115 IVIASVYLPPD---KPLLSSDI----ESLFGMGDSVILAGDLNCHHTRWNCRRTNVNGRR 273
IVIASVY PP P +D+ E G IL GD N H +W C R G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 274 L-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRP 450
L +A D EI+ T +P++ PS ID ++ + + + I + ++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 232
Query: 451 VVMQL 465
+++++
Sbjct: 233 ILLEI 237
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 64.9 bits (151), Expect = 6e-11
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 115 IVIASVYLPPD---KPLLSSDI----ESLFGMGDSVILAGDLNCHHTRWNCRRTNVNGRR 273
IVIASVY PP P +D+ E G IL GD N H +W C R G
Sbjct: 75 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 134
Query: 274 L-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRP 450
L +A D EI+ T +P++ PS ID ++ + + + I + ++L SDH P
Sbjct: 135 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 194
Query: 451 VVMQL 465
+++++
Sbjct: 195 ILLEI 199
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 64.9 bits (151), Expect = 6e-11
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 115 IVIASVYLPPD---KPLLSSDI----ESLFGMGDSVILAGDLNCHHTRWNCRRTNVNGRR 273
IVIASVY PP P +D+ E G IL GD N H +W C R G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 274 L-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRP 450
L +A D EI+ T +P++ PS ID ++ + + + I + ++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 232
Query: 451 VVMQL 465
+++++
Sbjct: 233 ILLEI 237
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 60.5 bits (140), Expect = 1e-09
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Frame = +1
Query: 1 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISL-TGHQPIVIASVYLPPDKPLLSSDIES 177
GG+A+ + L PL TP +S + + R+ L T + +A+VYLPP + + D +S
Sbjct: 67 GGSAVIIKSRLCHSPL-TP-ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKS 124
Query: 178 LF-GMGDSVILAGDLNCHHTRWNCRRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYN 345
+F +G+ I GD N H W R+ G+ L I ++++ PT Y YN
Sbjct: 125 MFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYN 181
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 58.4 bits (135), Expect = 5e-09
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Frame = +1
Query: 127 SVYLPPD---KPLLSSDI----ESLFGMGDSVILAGDLNCHHTRWNCRRTNVNGRRL-DA 282
SVY PP P +D+ E G IL GD N H +W C R G L +A
Sbjct: 1 SVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEA 60
Query: 283 FIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQ 462
D EI+ T +P++ PS ID ++ + + + I + ++L SDH P++++
Sbjct: 61 VQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLE 120
Query: 463 L 465
+
Sbjct: 121 I 121
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 58.4 bits (135), Expect = 5e-09
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +1
Query: 91 ISLTGHQPIVIASVYLPPDKPLLSSDI-ESLFGMGDSVILAGDLNCHHTRWNCRRTNVNG 267
+ L Q I I + Y+PP + SSDI E L + S IL GDLN W RTN G
Sbjct: 93 LQLNFEQVINIVNAYIPPSQIFSSSDISEILQNLNGSTILLGDLNSWSPLWGSPRTNTRG 152
Query: 268 RRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSEL-DSDH 444
++++ I + + ++ +PT + + ID++L+ + S L SDH
Sbjct: 153 KKIETVILENSLIVLNDGSPTHLSTHNTF--THIDISLISPQIAHMCSWSISDNLHGSDH 210
Query: 445 RPVVMQLGRPHNP 483
P+ + + P P
Sbjct: 211 FPITIHINTPTRP 223
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.6 bits (118), Expect = 6e-07
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 11/166 (6%)
Frame = +1
Query: 1 GGTA-IYYRRALHVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 171
GGTA I + H P++T + ++ S ++A +Y PP +
Sbjct: 76 GGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQF 135
Query: 172 ESLFGMGDSV-------ILAGDLNCHHTRWNCRRTNVNGRRLD-AFIDDLTFEIVGPPTP 327
LF + + IL GD NC H W + GR L + + +IV
Sbjct: 136 SKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 328 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQL 465
T +P++ +PS +D A+ + + + EL SDH P+ + L
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.6 bits (118), Expect = 6e-07
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 11/166 (6%)
Frame = +1
Query: 1 GGTA-IYYRRALHVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 171
GGTA I + H P++T + ++ S ++A +Y PP +
Sbjct: 76 GGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQF 135
Query: 172 ESLFGMGDSV-------ILAGDLNCHHTRWNCRRTNVNGRRLD-AFIDDLTFEIVGPPTP 327
LF + + IL GD NC H W + GR L + + +IV
Sbjct: 136 SKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 328 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQL 465
T +P++ +PS +D A+ + + + EL SDH P+ + L
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.6 bits (118), Expect = 6e-07
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 11/166 (6%)
Frame = +1
Query: 1 GGTA-IYYRRALHVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 171
GGTA I + H P++T + ++ S ++A +Y PP +
Sbjct: 76 GGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQF 135
Query: 172 ESLFGMGDSV-------ILAGDLNCHHTRWNCRRTNVNGRRLD-AFIDDLTFEIVGPPTP 327
LF + + IL GD NC H W + GR L + + +IV
Sbjct: 136 SKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 328 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQL 465
T +P++ +PS +D A+ + + + EL SDH P+ + L
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Frame = +1
Query: 70 IEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESLFGMGDSV-ILAGDLNCHHTRWNC 246
I+ I++ + I S Y+ P K + + + + F + + ++ GD N H W
Sbjct: 82 IDIEAIAINIESKLKLNIFSTYISPTKNITNQTLHNTFNIQQTPSLITGDFNGWHHPWGS 141
Query: 247 RRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMS 426
TN G+ FID++ ++ +PT + + + IDL L + + ++
Sbjct: 142 PTTNKRGKITHRFIDNMHLILLNDKSPTHFSTHNTY--THIDLTLCSPILAPHAKWKILN 199
Query: 427 EL-DSDHRPVVMQLGRPHNP 483
+L SDH P++ L NP
Sbjct: 200 DLHGSDHFPIITTLFPTTNP 219
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Frame = +1
Query: 127 SVYLPP-DKPLLSSD-IESLFGMGDS---VILAGDLNCHHTRWNCRRTNVNGR 270
S Y PP D P D +E L ++ GDLN T W R +N GR
Sbjct: 91 SCYAPPSDSPEQFEDMLEKLVNHASGRRPTVIGGDLNAWATEWGSRISNTRGR 143
>X76208-2|CAA53801.1| 504|Drosophila melanogaster protein
34-specific exons protein.
Length = 504
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 30 PARCPSRYSLALTYRGVSVPYLADGTPADRHRIRLSPPGQAPPEQ 164
P P YS+ L G VPY+ + P D +PP +A P +
Sbjct: 373 PPPPPFEYSIDLPPEGAEVPYVRNAEPGD-----FAPPAEAAPAE 412
>K02620-1|AAA28967.1| 510|Drosophila melanogaster protein (
D.melanogaster tropomyosingene isoform 33 (9B0, exon
10B. ).
Length = 510
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 30 PARCPSRYSLALTYRGVSVPYLADGTPADRHRIRLSPPGQAPPEQ 164
P P YS+ L G VPY+ + P D +PP +A P +
Sbjct: 382 PPPPPFEYSIDLPPEGAEVPYVRNAEPGD-----FAPPAEAAPAE 421
>BT029125-1|ABJ17058.1| 501|Drosophila melanogaster IP16008p
protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 30 PARCPSRYSLALTYRGVSVPYLADGTPADRHRIRLSPPGQAPPEQ 164
P P YS+ L G VPY+ + P D +PP +A P +
Sbjct: 373 PPPPPFEYSIDLPPEGAEVPYVRNAEPGD-----FAPPAEAAPAE 412
>AE014297-1996|AAN13647.2| 501|Drosophila melanogaster CG4898-PF,
isoform F protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 30 PARCPSRYSLALTYRGVSVPYLADGTPADRHRIRLSPPGQAPPEQ 164
P P YS+ L G VPY+ + P D +PP +A P +
Sbjct: 373 PPPPPFEYSIDLPPEGAEVPYVRNAEPGD-----FAPPAEAAPAE 412
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,436,774
Number of Sequences: 53049
Number of extensions: 620644
Number of successful extensions: 1661
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1638
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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