Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325E06f
         (357 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23511-3|AAC46790.1|  636|Caenorhabditis elegans Small protein 6...    31   0.31 
AF104017-1|AAD12261.1|  636|Caenorhabditis elegans serine-threon...    31   0.31 
Z92838-4|CAB07410.1| 1012|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical pr...    27   3.9  
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep...    27   5.1  
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue...    27   5.1  
M32877-1|AAA28001.1|  669|Caenorhabditis elegans daf-1 protein.        26   6.7  
AF067616-10|AAC19189.2|  668|Caenorhabditis elegans Abnormal dau...    26   6.7  
AF067616-9|AAP82657.1|  669|Caenorhabditis elegans Abnormal daue...    26   6.7  
AF003134-4|AAB54145.2|  395|Caenorhabditis elegans Hypothetical ...    26   6.7  

>U23511-3|AAC46790.1|  636|Caenorhabditis elegans Small protein 6
           protein.
          Length = 636

 Score = 30.7 bits (66), Expect = 0.31
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +3

Query: 171 LSGISKVMKECWYQNPAXRLTALRIKKTLA 260
           L+ +SK+M++ W+  P  R +AL++KK +A
Sbjct: 574 LNELSKLMEDSWHSIPHFRHSALKLKKEMA 603


>AF104017-1|AAD12261.1|  636|Caenorhabditis elegans serine-threonine
           kinase SMA-6 protein.
          Length = 636

 Score = 30.7 bits (66), Expect = 0.31
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +3

Query: 171 LSGISKVMKECWYQNPAXRLTALRIKKTLA 260
           L+ +SK+M++ W+  P  R +AL++KK +A
Sbjct: 574 LNELSKLMEDSWHSIPHFRHSALKLKKEMA 603


>Z92838-4|CAB07410.1| 1012|Caenorhabditis elegans Hypothetical
           protein T03D8.5 protein.
          Length = 1012

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 180 ISKVMKECWYQNPAXRLTALRIKKTLANXGTN 275
           +S ++++CW +NP  R T+ +IK  + +   N
Sbjct: 721 MSLLVRDCWNENPDQRPTSEQIKTLMKSMNHN 752


>Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical
           protein ZK970.5 protein.
          Length = 1143

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 189 VMKECWYQNPAXRLTALRIKKTLANXGTNGAD 284
           ++K+CW +NP  R +A  + K L +   N  D
Sbjct: 801 LVKDCWCENPEERPSAENVCKVLFDMTPNTED 832


>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
            homolog protein.
          Length = 1846

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 186  KVMKECWYQNPAXRLTALRIKKTLA 260
            KVMK CW  +P  R T L++   LA
Sbjct: 1497 KVMKMCWRYSPRDRPTFLQLVHLLA 1521


>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
            formation protein 2 protein.
          Length = 1843

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 186  KVMKECWYQNPAXRLTALRIKKTLA 260
            KVMK CW  +P  R T L++   LA
Sbjct: 1494 KVMKMCWRYSPRDRPTFLQLVHLLA 1518


>M32877-1|AAA28001.1|  669|Caenorhabditis elegans daf-1 protein.
          Length = 669

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 180 ISKVMKECWYQNPAXRLTALRIKKTL 257
           I +++K CW  NP+ R T+   +K +
Sbjct: 561 IMEIIKTCWNGNPSARFTSYICRKRM 586


>AF067616-10|AAC19189.2|  668|Caenorhabditis elegans Abnormal dauer
           formation protein1, isoform b protein.
          Length = 668

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 180 ISKVMKECWYQNPAXRLTALRIKKTL 257
           I +++K CW  NP+ R T+   +K +
Sbjct: 560 IMEIIKTCWNGNPSARFTSYICRKRM 585


>AF067616-9|AAP82657.1|  669|Caenorhabditis elegans Abnormal dauer
           formation protein1, isoform a protein.
          Length = 669

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 180 ISKVMKECWYQNPAXRLTALRIKKTL 257
           I +++K CW  NP+ R T+   +K +
Sbjct: 561 IMEIIKTCWNGNPSARFTSYICRKRM 586


>AF003134-4|AAB54145.2|  395|Caenorhabditis elegans Hypothetical
           protein ZC581.7 protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 180 ISKVMKECWYQNPAXRLTALRIKKTL 257
           I ++MK CW+ +P  R TA  +++ +
Sbjct: 346 IEEIMKLCWHVDPNQRPTASELREKI 371


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,357,609
Number of Sequences: 27780
Number of extensions: 137324
Number of successful extensions: 288
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)