Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325E03f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127940-1|BAC87200.1| 402|Homo sapiens protein ( Homo sapiens ... 68 2e-11
BC022516-1|AAH22516.1| 407|Homo sapiens arrestin domain contain... 58 2e-08
AF193051-1|AAG22479.1| 407|Homo sapiens unknown protein. 58 2e-08
BC070100-1|AAH70100.1| 418|Homo sapiens arrestin domain contain... 55 2e-07
BC028704-1|AAH28704.2| 418|Homo sapiens arrestin domain contain... 55 2e-07
BC032346-1|AAH32346.1| 433|Homo sapiens arrestin domain contain... 51 2e-06
AL365502-13|CAI14589.1| 433|Homo sapiens arrestin domain contai... 51 2e-06
AL365502-12|CAI14588.1| 271|Homo sapiens arrestin domain contai... 49 9e-06
AL365502-11|CAI14587.1| 177|Homo sapiens arrestin domain contai... 49 9e-06
S73591-1|AAB31977.2| 391|Homo sapiens brain-expressed HHCPA78 h... 40 0.007
BC093704-1|AAH93704.1| 391|Homo sapiens thioredoxin interacting... 40 0.007
BC093702-1|AAH93702.1| 391|Homo sapiens thioredoxin interacting... 40 0.007
AY594328-1|AAT01927.2| 391|Homo sapiens thioredoxin binding pro... 40 0.007
AL138842-3|CAI22351.1| 391|Homo sapiens thioredoxin interacting... 40 0.007
AB051901-1|BAB18859.1| 391|Homo sapiens VDUP1 protein. 40 0.007
BC039297-1|AAH39297.1| 1204|Homo sapiens fibronectin type III do... 30 5.7
AY358367-1|AAQ88733.1| 625|Homo sapiens YVTM2421 protein. 30 5.7
AK223599-1|BAD97319.1| 1204|Homo sapiens factor for adipocyte di... 30 5.7
AB098597-1|BAC53727.1| 1204|Homo sapiens FAD104 protein. 30 5.7
AK128831-1|BAC87631.1| 1576|Homo sapiens protein ( Homo sapiens ... 29 9.9
>AK127940-1|BAC87200.1| 402|Homo sapiens protein ( Homo sapiens
cDNA FLJ46050 fis, clone SYNOV3000345, weakly similar
to Homo sapiens thioredoxin interacting protein (TXNIP).
).
Length = 402
Score = 68.1 bits (159), Expect = 2e-11
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Frame = +3
Query: 84 FYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYKQVRYYGNEA 263
+ G+ + G V P+ V+AL V+A G A W+E + N V Y E
Sbjct: 21 YRGGERLCGRVLLEAAAPLRVRALEVKARGGAATHWLEGRSVGVNAVSS----DYAAAET 76
Query: 264 YLRHTQHLVANNGQIQ-LPAGPQSLPFRFQIPHTAPSTVAGERGNINYKITARLIQANNS 440
YLR Q L+ + G+ LP G F FQ+P T ++ G+ G++ Y I A L +
Sbjct: 77 YLRRRQLLLRDTGETTTLPPGRHEFLFSFQLPPTLVTSFEGKHGSVRYCIKATLHRPWVP 136
Query: 441 AEELGTIFEVVAPFDLN 491
A +F V+ P D+N
Sbjct: 137 ARRARKVFTVIEPVDIN 153
>BC022516-1|AAH22516.1| 407|Homo sapiens arrestin domain containing
2 protein.
Length = 407
Score = 58.0 bits (134), Expect = 2e-08
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Frame = +3
Query: 72 IRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYKQVRYY 251
+ VF GQ V G V L V AL + A G A V W E + Y Q Y
Sbjct: 20 VEPVFSGGQAVAGRVLLELSSAARVGALRLRARGRAHVHWTESRSA--GSSTAYTQ-SYS 76
Query: 252 GNEAYLRHTQHLVA-NNGQIQ-LPAGPQSLPFRFQIPHTAPSTVAGERGNINYKITARLI 425
+ H L+A + G+ LP G F FQ+P T ++ G+ G++ Y I A L
Sbjct: 77 ERVEVVSHRATLLAPDTGETTTLPPGRHEFLFSFQLPPTLVTSFEGKHGSVRYCIKATLH 136
Query: 426 QANNSAEELGTIFEVVAPFDLN 491
+ A +F V+ P D+N
Sbjct: 137 RPWVPARRARKVFTVIEPVDIN 158
>AF193051-1|AAG22479.1| 407|Homo sapiens unknown protein.
Length = 407
Score = 58.0 bits (134), Expect = 2e-08
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Frame = +3
Query: 72 IRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYKQVRYY 251
+ VF GQ V G V L V AL + A G A V W E + Y Q Y
Sbjct: 20 VEPVFSGGQAVAGRVLLELSSAARVGALRLRARGRAHVHWTESRSA--GSSTAYTQ-SYS 76
Query: 252 GNEAYLRHTQHLVA-NNGQIQ-LPAGPQSLPFRFQIPHTAPSTVAGERGNINYKITARLI 425
+ H L+A + G+ LP G F FQ+P T ++ G+ G++ Y I A L
Sbjct: 77 ERVEVVSHRATLLAPDTGETTTLPPGRHEFLFSFQLPPTLVTSFEGKHGSVRYCIKATLH 136
Query: 426 QANNSAEELGTIFEVVAPFDLN 491
+ A +F V+ P D+N
Sbjct: 137 RPWVPARRARKVFTVIEPVDIN 158
>BC070100-1|AAH70100.1| 418|Homo sapiens arrestin domain containing
4 protein.
Length = 418
Score = 54.8 bits (126), Expect = 2e-07
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Frame = +3
Query: 51 GTIKLDSIRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEW----IEKETETYN 218
G + D + + SG+ V G V P+ ++AL +EA G A W + + +
Sbjct: 21 GLVFEDERKGCYSSGETVAGHVLLEASEPVALRALRLEAQGRATAAWGPSTCPRASASAA 80
Query: 219 GVKQYKQVRYYGNEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIP-HTAPSTVAGERGN 395
+ + +V Y LR A G I L G PFRFQ+P ++ G+ G+
Sbjct: 81 ALAVFSEVEYLNVRLSLREPP---AGEGIILLQPGKHEFPFRFQLPSEPLVTSFTGKYGS 137
Query: 396 INYKITARLIQANNSAEELGTIFEVVAPFDLN 491
I Y + A L + + + +VV+ D+N
Sbjct: 138 IQYCVRAVLERPKVPDQSVKRELQVVSHVDVN 169
>BC028704-1|AAH28704.2| 418|Homo sapiens arrestin domain containing
4 protein.
Length = 418
Score = 54.8 bits (126), Expect = 2e-07
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Frame = +3
Query: 51 GTIKLDSIRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEW----IEKETETYN 218
G + D + + SG+ V G V P+ ++AL +EA G A W + + +
Sbjct: 21 GLVFEDERKGCYSSGETVAGHVLLEASEPVALRALRLEAQGRATAAWGPSTCPRASASAA 80
Query: 219 GVKQYKQVRYYGNEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIP-HTAPSTVAGERGN 395
+ + +V Y LR A G I L G PFRFQ+P ++ G+ G+
Sbjct: 81 ALAVFSEVEYLNVRLSLREPP---AGEGIILLQPGKHEFPFRFQLPSEPLVTSFTGKYGS 137
Query: 396 INYKITARLIQANNSAEELGTIFEVVAPFDLN 491
I Y + A L + + + +VV+ D+N
Sbjct: 138 IQYCVRAVLERPKVPDQSVKRELQVVSHVDVN 169
>BC032346-1|AAH32346.1| 433|Homo sapiens arrestin domain containing
1 protein.
Length = 433
Score = 51.2 bits (117), Expect = 2e-06
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Frame = +3
Query: 57 IKLDSIRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYK 236
I L R V+ G+ + G+V L P+ +A+ V G V K +T
Sbjct: 9 ISLSHGRVVYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVS--NKANDT-------- 58
Query: 237 QVRYYGNEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPSTVAGERGNINYKITA 416
+ E Y + L A+ G LPAG S PF+F +P TAP++ G G I +++ A
Sbjct: 59 --AWVVEEGYFNSSLSL-ADKGS--LPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRA 113
Query: 417 RLIQANNSAE-ELGTIFEVVAPFDLNLANDTVKQP 518
+ S + + +F +++P +LN D ++QP
Sbjct: 114 AIHTPRFSKDHKCSLVFYILSPLNLNSIPD-IEQP 147
>AL365502-13|CAI14589.1| 433|Homo sapiens arrestin domain
containing 1 protein.
Length = 433
Score = 51.2 bits (117), Expect = 2e-06
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Frame = +3
Query: 57 IKLDSIRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYK 236
I L R V+ G+ + G+V L P+ +A+ V G V K +T
Sbjct: 9 ISLSHGRVVYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVS--NKANDT-------- 58
Query: 237 QVRYYGNEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPSTVAGERGNINYKITA 416
+ E Y + L A+ G LPAG S PF+F +P TAP++ G G I +++ A
Sbjct: 59 --AWVVEEGYFNSSLSL-ADKGS--LPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRA 113
Query: 417 RLIQANNSAE-ELGTIFEVVAPFDLNLANDTVKQP 518
+ S + + +F +++P +LN D ++QP
Sbjct: 114 AIHTPRFSKDHKCSLVFYILSPLNLNSIPD-IEQP 147
>AL365502-12|CAI14588.1| 271|Homo sapiens arrestin domain
containing 1 protein.
Length = 271
Score = 49.2 bits (112), Expect = 9e-06
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Frame = +3
Query: 57 IKLDSIRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYK 236
I L R V+ G+ + G+V L P+ +A+ V G V K +T
Sbjct: 9 ISLSHGRVVYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVS--NKANDT-------- 58
Query: 237 QVRYYGNEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPSTVAGERGNINYKITA 416
+ E Y + L A+ G LPAG S PF+F +P TAP++ G G I +++ A
Sbjct: 59 --AWVVEEGYFNSSLSL-ADKGS--LPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRA 113
Query: 417 RLIQANNSAE-ELGTIFEVVAPFDLNLAND 503
+ S + + +F +++P +LN D
Sbjct: 114 AIHTPRFSKDHKCSLVFYILSPLNLNSIPD 143
>AL365502-11|CAI14587.1| 177|Homo sapiens arrestin domain
containing 1 protein.
Length = 177
Score = 49.2 bits (112), Expect = 9e-06
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Frame = +3
Query: 57 IKLDSIRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYK 236
I L R V+ G+ + G+V L P+ +A+ V G V K +T
Sbjct: 9 ISLSHGRVVYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVS--NKANDT-------- 58
Query: 237 QVRYYGNEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPSTVAGERGNINYKITA 416
+ E Y + L A+ G LPAG S PF+F +P TAP++ G G I +++ A
Sbjct: 59 --AWVVEEGYFNSSLSL-ADKGS--LPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRA 113
Query: 417 RLIQANNSAE-ELGTIFEVVAPFDLNLAND 503
+ S + + +F +++P +LN D
Sbjct: 114 AIHTPRFSKDHKCSLVFYILSPLNLNSIPD 143
>S73591-1|AAB31977.2| 391|Homo sapiens brain-expressed HHCPA78
homolog VDUP1 protein.
Length = 391
Score = 39.5 bits (88), Expect = 0.007
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +3
Query: 81 VFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYKQVRYY--G 254
V+ SG+ V G V + V+A+ + A G A V W++ G +Q KQ Y
Sbjct: 20 VYGSGERVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQ-------GSQQCKQTSEYLRY 72
Query: 255 NEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPST-VAGERGNINYKITARLIQA 431
+ L Q N I P F F++P T G+ G ++Y + A L +
Sbjct: 73 EDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLDRP 132
Query: 432 NNSAEELGTIFEVVAPFDLN 491
+ +E FEVV D+N
Sbjct: 133 SQPTQETKKNFEVVDLVDVN 152
>BC093704-1|AAH93704.1| 391|Homo sapiens thioredoxin interacting
protein protein.
Length = 391
Score = 39.5 bits (88), Expect = 0.007
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +3
Query: 81 VFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYKQVRYY--G 254
V+ SG+ V G V + V+A+ + A G A V W++ G +Q KQ Y
Sbjct: 20 VYGSGEKVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQ-------GSQQCKQTSEYLRY 72
Query: 255 NEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPST-VAGERGNINYKITARLIQA 431
+ L Q N I P F F++P T G+ G ++Y + A L +
Sbjct: 73 EDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLDRP 132
Query: 432 NNSAEELGTIFEVVAPFDLN 491
+ +E FEVV D+N
Sbjct: 133 SQPTQETKKNFEVVDLVDVN 152
>BC093702-1|AAH93702.1| 391|Homo sapiens thioredoxin interacting
protein protein.
Length = 391
Score = 39.5 bits (88), Expect = 0.007
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +3
Query: 81 VFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYKQVRYY--G 254
V+ SG+ V G V + V+A+ + A G A V W++ G +Q KQ Y
Sbjct: 20 VYGSGEKVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQ-------GSQQCKQTSEYLRY 72
Query: 255 NEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPST-VAGERGNINYKITARLIQA 431
+ L Q N I P F F++P T G+ G ++Y + A L +
Sbjct: 73 EDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLDRP 132
Query: 432 NNSAEELGTIFEVVAPFDLN 491
+ +E FEVV D+N
Sbjct: 133 SQPTQETKKNFEVVDLVDVN 152
>AY594328-1|AAT01927.2| 391|Homo sapiens thioredoxin binding
protein 2 protein.
Length = 391
Score = 39.5 bits (88), Expect = 0.007
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +3
Query: 81 VFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYKQVRYY--G 254
V+ SG+ V G V + V+A+ + A G A V W++ G +Q KQ Y
Sbjct: 20 VYGSGERVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQ-------GSQQCKQTSEYLRY 72
Query: 255 NEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPST-VAGERGNINYKITARLIQA 431
+ L Q N I P F F++P T G+ G ++Y + A L +
Sbjct: 73 EDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLDRP 132
Query: 432 NNSAEELGTIFEVVAPFDLN 491
+ +E FEVV D+N
Sbjct: 133 SQPTQETKKNFEVVDLVDVN 152
>AL138842-3|CAI22351.1| 391|Homo sapiens thioredoxin interacting
protein protein.
Length = 391
Score = 39.5 bits (88), Expect = 0.007
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +3
Query: 81 VFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYKQVRYY--G 254
V+ SG+ V G V + V+A+ + A G A V W++ G +Q KQ Y
Sbjct: 20 VYGSGEKVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQ-------GSQQCKQTSEYLRY 72
Query: 255 NEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPST-VAGERGNINYKITARLIQA 431
+ L Q N I P F F++P T G+ G ++Y + A L +
Sbjct: 73 EDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLDRP 132
Query: 432 NNSAEELGTIFEVVAPFDLN 491
+ +E FEVV D+N
Sbjct: 133 SQPTQETKKNFEVVDLVDVN 152
>AB051901-1|BAB18859.1| 391|Homo sapiens VDUP1 protein.
Length = 391
Score = 39.5 bits (88), Expect = 0.007
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +3
Query: 81 VFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYKQVRYY--G 254
V+ SG+ V G V + V+A+ + A G A V W++ G +Q KQ Y
Sbjct: 20 VYGSGEKVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQ-------GSQQCKQTSEYLRY 72
Query: 255 NEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPST-VAGERGNINYKITARLIQA 431
+ L Q N I P F F++P T G+ G ++Y + A L +
Sbjct: 73 EDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLDRP 132
Query: 432 NNSAEELGTIFEVVAPFDLN 491
+ +E FEVV D+N
Sbjct: 133 SQPTQETKKNFEVVDLVDVN 152
>BC039297-1|AAH39297.1| 1204|Homo sapiens fibronectin type III
domain containing 3B protein.
Length = 1204
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 264 YLRHTQHLVANNGQIQLP--AGPQSLPFRFQIPHTAPSTVAGER 389
YL H H + N+ P GP +P +F H P T+ GE+
Sbjct: 126 YLTHHPHFIHNSHTAYYPPVTGPGDMPPQFFPQHHLPHTIYGEQ 169
>AY358367-1|AAQ88733.1| 625|Homo sapiens YVTM2421 protein.
Length = 625
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 264 YLRHTQHLVANNGQIQLP--AGPQSLPFRFQIPHTAPSTVAGER 389
YL H H + N+ P GP +P +F H P T+ GE+
Sbjct: 122 YLTHHPHFIHNSHTAYYPPVTGPGDMPPQFFPQHHLPHTIYGEQ 165
>AK223599-1|BAD97319.1| 1204|Homo sapiens factor for adipocyte
differentiation 104 variant protein.
Length = 1204
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 264 YLRHTQHLVANNGQIQLP--AGPQSLPFRFQIPHTAPSTVAGER 389
YL H H + N+ P GP +P +F H P T+ GE+
Sbjct: 126 YLTHHPHFIHNSHTAYYPPVTGPGDMPPQFFPQHHLPHTIYGEQ 169
>AB098597-1|BAC53727.1| 1204|Homo sapiens FAD104 protein.
Length = 1204
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 264 YLRHTQHLVANNGQIQLP--AGPQSLPFRFQIPHTAPSTVAGER 389
YL H H + N+ P GP +P +F H P T+ GE+
Sbjct: 126 YLTHHPHFIHNSHTAYYPPVTGPGDMPPQFFPQHHLPHTIYGEQ 169
>AK128831-1|BAC87631.1| 1576|Homo sapiens protein ( Homo sapiens cDNA
FLJ46321 fis, clone TESTI4043067. ).
Length = 1576
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 270 RHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPS 371
R Q + A G+I + PQS+P R +PH P+
Sbjct: 1497 RQPQKVEAFKGKILCQSHPQSMPHRKPVPHPNPT 1530
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,475,188
Number of Sequences: 237096
Number of extensions: 1374575
Number of successful extensions: 3069
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3063
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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