Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325E02f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0119 + 820566-820739,822708-822737,823153-823266,823341-82...    29   1.7  
04_04_0237 + 23831949-23832354,23833970-23835166,23835274-238354...    29   3.0  
02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619     29   3.0  
03_05_0346 + 23335753-23335854,23336268-23336473,23336530-233367...    28   4.0  
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951...    27   9.1  
02_04_0390 - 22572994-22573350,22573498-22573506                       27   9.1  

>05_01_0119 +
           820566-820739,822708-822737,823153-823266,823341-823433,
           823521-823586,824076-824174,824480-824559,825039-825151,
           825600-825688,825955-826041,826128-826130,826285-826383
          Length = 348

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 396 YTSSFLRAKPSNPEAFTPS 340
           YT SFLR+KP  P A  PS
Sbjct: 324 YTKSFLRSKPQKPAAANPS 342


>04_04_0237 +
           23831949-23832354,23833970-23835166,23835274-23835453,
           23835537-23835823,23835912-23836029,23836354-23836483,
           23836693-23836861,23836926-23836991,23837466-23837738,
           23838131-23838349
          Length = 1014

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 403 WTWINN*D-FIKQSCAYTWNLIHLLKSLTTSQNQTF 507
           WTW NN    + ++C YT      +K++ T + QT+
Sbjct: 307 WTWNNNNPPSLTRTCQYTKGATKFMKAVKTIEEQTY 342


>02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619
          Length = 398

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 194 DTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 337
           + +A  KL H+V I         +  Q  S+QQ +++  C  C  ++K
Sbjct: 96  EAYAKEKLAHSVLIESSPGLSLSLNSQPASKQQCAMELACPLCRGDVK 143


>03_05_0346 +
           23335753-23335854,23336268-23336473,23336530-23336705,
           23336832-23337064,23337546-23337963,23338045-23338262,
           23338905-23339168
          Length = 538

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 326 VEIKQLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHV 445
           + +K  G N      F ++KD+V  I HG  I+ + +NHV
Sbjct: 257 ITLKWHGKNRKWHPKFYIRKDQVGYILHGRWIDFVRHNHV 296


>03_02_0568 +
           9514715-9514944,9515174-9515300,9515529-9515684,
           9515765-9516102,9516191-9516329,9517083-9517152,
           9517201-9517307,9517387-9517437,9517549-9517660,
           9517783-9517869,9517958-9518133,9518479-9518586,
           9518654-9518812,9518888-9518971,9519053-9519258,
           9519565-9519666,9519768-9519877,9519963-9520114,
           9520380-9520548,9520841-9520878,9521963-9522571,
           9523314-9523784,9523786-9523871,9524396-9524906,
           9525388-9525412,9526001-9526051,9526228-9526301,
           9526412-9526534,9526667-9526738,9526924-9527020,
           9527174-9527283
          Length = 1649

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 9/38 (23%), Positives = 23/38 (60%)
 Frame = +2

Query: 227 VQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 340
           ++ +  +NKE K+  +SC ++ L L+    + ++ +K+
Sbjct: 395 IEYLETQNKELKMNIESCKKEYLDLEEAHSRANISLKE 432


>02_04_0390 - 22572994-22573350,22573498-22573506
          Length = 121

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
 Frame = +2

Query: 281 SRQQLSLKAD--CEKCHVEIKQLGVNASGLDGFALK---KDEVYEIGHG 412
           ++Q++ +K +  C+KC  +   L     G+D  AL    KD+V  +G G
Sbjct: 2   AKQKIVIKVEMSCDKCRSKAMALVAATGGVDSVALAGDGKDQVVVVGDG 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,245,992
Number of Sequences: 37544
Number of extensions: 214627
Number of successful extensions: 522
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)