Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325D11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011120-1|AAR82787.1|  291|Drosophila melanogaster LD12690p pro...    48   1e-05
AF234629-1|AAF40432.1|  251|Drosophila melanogaster DID protein.       45   5e-05
AE014297-1662|AAF54931.1|  251|Drosophila melanogaster CG9829-PA...    44   1e-04
AY118631-1|AAM50000.1|  300|Drosophila melanogaster RE66512p pro...    28   8.8  

>BT011120-1|AAR82787.1|  291|Drosophila melanogaster LD12690p
           protein.
          Length = 291

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
 Frame = +1

Query: 157 N*QVESRMSDIITSCLQLQKNISTNRIVVKEINGCDGSFIVNCVISYCIK-QNSPLLIVS 333
           N ++E+  + ++ +C  L +      + + E +  D SF+++CV+   ++  N+  L+V 
Sbjct: 35  NQRIETMATSVLLAC-GLNEQKLPGFVHISEESNVDASFLISCVLGQRLRISNAGTLLVC 93

Query: 334 SHNSITHYHNVGLRM--NHNLFKSCEAGVIDYFD------FGDATLTNIMEYAESDQLLI 489
             +   HY N G+R+  N N+F+    GVID              LTN      +DQL+ 
Sbjct: 94  LQHHYQHYFNAGMRLGYNTNIFQGKTLGVIDVLSDMAGEGLASKWLTNTEGQTLTDQLVE 153

Query: 490 DV 495
           D+
Sbjct: 154 DI 155


>AF234629-1|AAF40432.1|  251|Drosophila melanogaster DID protein.
          Length = 251

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
 Frame = +1

Query: 241 VKEINGCDGSFIVNCVISYCIK-QNSPLLIVSSHNSITHYHNVGLRM--NHNLFKSCEAG 411
           + E +  DGSF+++CV+   ++  N+  L+V   +   HY N G+R+  N N+F+    G
Sbjct: 22  ISEESNVDGSFLISCVLGQRLRISNAGTLLVCLQHHYQHYFNAGMRLGYNTNIFQGKTLG 81

Query: 412 VID 420
           VID
Sbjct: 82  VID 84


>AE014297-1662|AAF54931.1|  251|Drosophila melanogaster CG9829-PA
           protein.
          Length = 251

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
 Frame = +1

Query: 241 VKEINGCDGSFIVNCVISYCIK-QNSPLLIVSSHNSITHYHNVGLRM--NHNLFKSCEAG 411
           + E +  D SF+++CV+   ++  N+  L+V   +   HY N G+R+  N N+F+    G
Sbjct: 22  ISEESNVDASFLISCVLGQRLRISNAGTLLVCLQHHYQHYFNAGMRLGYNTNIFQGKTLG 81

Query: 412 VIDYFD------FGDATLTNIMEYAESDQLLIDV 495
           VID              LTN      +DQL+ D+
Sbjct: 82  VIDVLSDMAGEGLASKWLTNTEGQTLTDQLVEDI 115


>AY118631-1|AAM50000.1|  300|Drosophila melanogaster RE66512p
           protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 427 QNNLSPQPHNF*TDYGSFLNQHCGNELLSYVRILSKEGC 311
           Q+N   +P +   DYG++L      E+LS +++ S  GC
Sbjct: 242 QHNSRKRPPSDHQDYGNYLETCRAAEILSSMKLQSPHGC 280


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,340,865
Number of Sequences: 53049
Number of extensions: 374209
Number of successful extensions: 702
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)