Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325D08f
(336 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical... 81 2e-16
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 49 1e-06
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 49 1e-06
L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 48 1e-06
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 46 5e-06
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 46 5e-06
U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical pr... 44 4e-05
M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical pr... 43 6e-05
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 42 1e-04
U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle abno... 40 3e-04
S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein. 40 3e-04
Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical pr... 38 0.001
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 38 0.002
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 38 0.002
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 38 0.002
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 38 0.002
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 37 0.003
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 37 0.004
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 37 0.004
AF475094-1|AAL84635.1| 533|Caenorhabditis elegans SRC-1 protein. 36 0.007
AF419171-1|AAN31394.1| 533|Caenorhabditis elegans protein tyros... 36 0.007
AC084161-5|AAK29735.4| 533|Caenorhabditis elegans Src oncogene ... 36 0.007
U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical pr... 35 0.013
U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical pr... 35 0.013
AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical... 34 0.022
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 34 0.022
Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical pr... 34 0.029
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 33 0.067
AL032631-13|CAA21577.2| 220|Caenorhabditis elegans Hypothetical... 32 0.089
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 32 0.12
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 32 0.12
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 32 0.12
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 32 0.12
AC093703-1|AAL00863.3| 346|Caenorhabditis elegans Hypothetical ... 31 0.21
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 31 0.27
Z70035-10|CAA93871.2| 473|Caenorhabditis elegans Hypothetical p... 27 2.5
U97407-8|AAN84851.1| 397|Caenorhabditis elegans Prion-like-(q/n... 27 2.5
U97407-7|AAB52480.2| 457|Caenorhabditis elegans Prion-like-(q/n... 27 2.5
AF188748-1|AAF00545.1| 198|Caenorhabditis elegans putative tyro... 27 2.5
Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z66523-1|CAA91411.1| 361|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z49966-3|CAA90241.1| 361|Caenorhabditis elegans Hypothetical pr... 27 4.4
U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase... 27 4.4
AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical ... 27 4.4
U00031-4|AAK18867.1| 378|Caenorhabditis elegans Hypothetical pr... 26 7.7
>AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical
protein Y45F10D.13a protein.
Length = 473
Score = 81.0 bits (191), Expect = 2e-16
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = +1
Query: 64 YRAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKR 225
YRA+Y Y+PQ DEL+L D ++V+EKCDDGW++G+S RTG FG FPG KR
Sbjct: 419 YRAVYPYQPQKEDELQLYTNDIIFVVEKCDDGWFIGTSLRTGDFGIFPGNYVKR 472
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 25 EPLYVD-TNAEAIPYRAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGT 201
EP + D T + A+YK+ P++ EL LN GD + ++ + D W G +R GR G
Sbjct: 142 EPAHRDYTPQPVMTATAVYKFEPRSARELPLNRGDIIRIIREVDGYWMEG--ERNGRSGI 199
Query: 202 FP 207
FP
Sbjct: 200 FP 201
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 73 MYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKRINCEIPKSK 252
++ Y+P DEL+LN GD++ +L K DGW G G G FP + I + ++
Sbjct: 537 VHAYQPSQADELQLNIGDSLNILRKMPDGWLYGERAGDGLGGWFPSSYVQAIINDHTRAN 596
Query: 253 RYR 261
YR
Sbjct: 597 NYR 599
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 73 MYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKRINCEIPKSK 252
++ Y+P DEL+LN GD++ +L K DGW G G G FP + I + ++
Sbjct: 1025 VHAYQPSQADELQLNIGDSLNILRKMPDGWLYGERAGDGLGGWFPSSYVQAIINDHTRAN 1084
Query: 253 RYR 261
YR
Sbjct: 1085 NYR 1087
>L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical
protein F42H10.3 protein.
Length = 335
Score = 48.4 bits (110), Expect = 1e-06
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 13 LNNTEPLYVDTNAEAIPYRAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGR 192
L++ + T +A+Y Y + DE+ EGD + EK DDGW G+ QRT +
Sbjct: 254 LSSPQSTISPTGKAGFAVKAIYDYAAADKDEISFLEGDIIVNCEKIDDGWMTGTVQRTLQ 313
Query: 193 FGTFP 207
+G P
Sbjct: 314 WGMLP 318
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 46.4 bits (105), Expect = 5e-06
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 76 YKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKRI 228
+ Y P+ DEL L +GD VYV+EK DGW+ G + G G FP + +
Sbjct: 11 FTYEPRLEDELGLTKGDFVYVVEKSTDGWWKGEAP-NGGVGWFPSNYVEEV 60
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 46.4 bits (105), Expect = 5e-06
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 76 YKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKRI 228
+ Y P+ DEL L +GD VYV+EK DGW+ G + G G FP + +
Sbjct: 123 FTYEPRLEDELGLTKGDFVYVVEKSTDGWWKGEAP-NGGVGWFPSNYVEEV 172
>U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical
protein B0336.6 protein.
Length = 469
Score = 43.6 bits (98), Expect = 4e-05
Identities = 23/48 (47%), Positives = 25/48 (52%)
Frame = +1
Query: 67 RAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPG 210
R +Y Y DEL L E VYVL+K DD WY G G G FPG
Sbjct: 418 RVLYDYDAAKEDELTLRENAIVYVLKKNDDDWYEGVLD--GVTGLFPG 463
>M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical
protein B0303.7 protein.
Length = 493
Score = 42.7 bits (96), Expect = 6e-05
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 49 AEAIPYR-AMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFP 207
A + PY A + Y P DE+ L GDTV + +K D W+ G +Q FG P
Sbjct: 190 AISTPYGIAKFDYAPTQSDEMGLRIGDTVLISKKVDAEWFYGENQNQRTFGIVP 243
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 41.5 bits (93), Expect = 1e-04
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 64 YRAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFP 207
Y A Y Y + DEL GD + ++ +DGW G + TG G FP
Sbjct: 51 YVATYAYSSKQDDELSFVVGDLIELISDVEDGWSKGKLKSTGAVGMFP 98
Score = 32.3 bits (70), Expect = 0.089
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 67 RAMYKYRPQNPDELELNEGDTVYVL--EKCDD-GWYVGSSQRTGRFGTFP 207
R + Y PQ+ DEL L E D + + + C D GW+ G + G+ G FP
Sbjct: 196 RVKFVYNPQHDDELALKEIDMLINITNKNCGDAGWFEG--ELHGKKGLFP 243
>U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle
abnormal protein 5 protein.
Length = 228
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 31 LYVDTNAEAIPYRAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPG 210
L D N E +A++ + PQ EL GD + ++ K D W+ G Q R G FP
Sbjct: 148 LLSDMNVETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEG--QLNNRRGIFPS 205
Query: 211 K-IC 219
+C
Sbjct: 206 NYVC 209
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLEKCDD-GWYVGSSQRTGRFGTFPGKICKRINC 234
A + ++ +PDEL G+T+ VL K +D WY ++ G G P + C
Sbjct: 5 AEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWY--KAELDGNEGFIPSNYIRMTEC 58
>S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein.
Length = 228
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 31 LYVDTNAEAIPYRAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPG 210
L D N E +A++ + PQ EL GD + ++ K D W+ G Q R G FP
Sbjct: 148 LLSDMNVETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEG--QLNNRRGIFPS 205
Query: 211 K-IC 219
+C
Sbjct: 206 NYVC 209
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLEKCDD-GWYVGSSQRTGRFGTFPGKICKRINC 234
A + ++ +PDEL G+T+ VL K +D WY ++ G G P + C
Sbjct: 5 AEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWY--KAELDGNEGFIPSNYIRMTEC 58
>Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical
protein C36E8.4 protein.
Length = 548
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 1 SGVDLNNTEPLYVDTNAEAIPYRAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVG 171
+G + T T++ R +Y + P++ DE+E+ EG V V ++ D W +G
Sbjct: 465 NGGPIRTTTTFDEPTSSPPTICRVLYDFEPKHADEIEIREGQCVLVEDRIGDDWLIG 521
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 82 YRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKI 216
Y P L+L +GD V V+E W+ G +++ +FGTFP +
Sbjct: 377 YNSIQPGALQLTKGDEVVVVENTGQDWF-GQNKKNQKFGTFPRSV 420
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 82 YRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKI 216
Y P L+L +GD V V+E W+ G +++ +FGTFP +
Sbjct: 377 YNSIQPGALQLTKGDEVVVVENTGQDWF-GQNKKNQKFGTFPRSV 420
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGD--TVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKRI 228
A Y+Y Q DEL L G T+ +E +DGWY G + G+ G FP + +
Sbjct: 76 ASYEYEAQKDDELNLPLGAIITLVTVETNEDGWYRG--ELNGKVGLFPSNYAREV 128
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGD--TVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKRI 228
A Y+Y Q DEL L G T+ +E +DGWY G + G+ G FP + +
Sbjct: 76 ASYEYEAQKDDELNLPLGAIITLVTVETNEDGWYRG--ELNGKVGLFPSNYAREV 128
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVG-SSQRTGRFGTFP 207
A+Y Y PDEL GD + V +K + W+ G Q + G FP
Sbjct: 1044 AVYDYEASQPDELGFKTGDVIIVTDKSEAEWWSGHREQDPSKSGLFP 1090
Score = 35.9 bits (79), Expect = 0.007
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 64 YRAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFP 207
Y +Y + +L L+ GDT+ VLEK D+ W + GR G FP
Sbjct: 899 YTVIYDFEAVETTDLALHVGDTILVLEKNDEWW---KGRCNGREGIFP 943
Score = 35.1 bits (77), Expect = 0.013
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKRI 228
A +++R +N ++L +GDT+ VLEK + W G G FP K +
Sbjct: 799 AQFQWRARNEEDLSFAKGDTIEVLEKQEMKW--KGRNPAGEIGWFPKSYVKEV 849
Score = 29.9 bits (64), Expect = 0.47
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 67 RAMYKYRPQNPDELELNEGDTVYVLEK--CDDGWYVGSSQRTGRFGTFP 207
RA++ + ++ DEL GD + V + + GW G Q + G FP
Sbjct: 679 RALFAFEARSEDELSFEPGDVIIVFQSHAAEPGWRAG--QLREKVGWFP 725
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical protein
F29D10.4 protein.
Length = 1100
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICK 222
A+Y Y Q+ DEL G + ++ K GW+ G + R G FPG K
Sbjct: 1051 AVYPYEAQDVDELSFEAGAEIELMNKDASGWWQG--KVNNRVGLFPGNYVK 1099
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICK 222
A+Y Y Q+ DEL G + ++ K GW+ G + R G FPG K
Sbjct: 987 AVYPYEAQDVDELSFEAGAEIELMNKDASGWWQG--KVNNRVGLFPGNYVK 1035
>AF475094-1|AAL84635.1| 533|Caenorhabditis elegans SRC-1 protein.
Length = 533
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFP 207
A+Y Y + +L +GD +Y+L+ + W+ QRTG+ G P
Sbjct: 78 ALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVP 123
>AF419171-1|AAN31394.1| 533|Caenorhabditis elegans protein tyrosine
kinase protein.
Length = 533
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFP 207
A+Y Y + +L +GD +Y+L+ + W+ QRTG+ G P
Sbjct: 78 ALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVP 123
>AC084161-5|AAK29735.4| 533|Caenorhabditis elegans Src oncogene
related protein 1 protein.
Length = 533
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFP 207
A+Y Y + +L +GD +Y+L+ + W+ QRTG+ G P
Sbjct: 78 ALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVP 123
>U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical
protein F45E1.7a protein.
Length = 489
Score = 35.1 bits (77), Expect = 0.013
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 61 PYRAMYKYRPQNPDELELNEGDTVYVLEKCDD-GWYVGSSQRTGRFGTFPGKICKRINCE 237
P +Y Y P DE+ L +G+ + VL + D GW G + +G G FP + C+
Sbjct: 431 PAVVLYDYAPAEGDEIALRKGEMIEVLTEPDSLGWCTG--RVSGNVGLFPASY---VQCQ 485
Query: 238 IPKS 249
KS
Sbjct: 486 GEKS 489
>U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical
protein F45E1.7b protein.
Length = 495
Score = 35.1 bits (77), Expect = 0.013
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 61 PYRAMYKYRPQNPDELELNEGDTVYVLEKCDD-GWYVGSSQRTGRFGTFPGKICKRINCE 237
P +Y Y P DE+ L +G+ + VL + D GW G + +G G FP + C+
Sbjct: 437 PAVVLYDYAPAEGDEIALRKGEMIEVLTEPDSLGWCTG--RVSGNVGLFPASY---VQCQ 491
Query: 238 IPKS 249
KS
Sbjct: 492 GEKS 495
>AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical
protein Y47G6A.5b protein.
Length = 574
Score = 34.3 bits (75), Expect = 0.022
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 79 KYRPQNPDELELNEGDTVYVLEKCD-DGWYVGSSQR 183
++ Q P E+ + EGD +Y++E+ + + WYV S R
Sbjct: 104 RFLAQTPKEMSVEEGDVLYLIEQSNREWWYVASKSR 139
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 34.3 bits (75), Expect = 0.022
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 79 KYRPQNPDELELNEGDTVYVLEKCD-DGWYVGSSQR 183
++ Q P E+ + EGD +Y++E+ + + WYV S R
Sbjct: 148 RFLAQTPKEMSVEEGDVLYLIEQSNREWWYVASKSR 183
>Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical
protein K11E4.4 protein.
Length = 825
Score = 33.9 bits (74), Expect = 0.029
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 67 RAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKRINCEIPK 246
RA +++ N DEL ++ D + + ++ + GW+ G+ + G G FP I E K
Sbjct: 191 RAKFQFEGSNNDELSFDKDDIITITQQQEGGWWEGTHE--GVTGWFPCAYVTLIT-EKDK 247
Query: 247 SKRYRLI-FKTAPEVKRX*VVLGYRHLL 327
+R R + TA EV YR L+
Sbjct: 248 LQRSRSVPNATAKEVVSVGAQPDYRDLV 275
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 32.7 bits (71), Expect = 0.067
Identities = 13/59 (22%), Positives = 27/59 (45%)
Frame = +1
Query: 49 AEAIPYRAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKR 225
+++ + A+++Y + D+L + D + +L W+ + TGR G P R
Sbjct: 57 SQSANFVALFQYDARTDDDLSFKKDDILEILNDTQGDWWFARHKATGRTGYIPSNYVAR 115
>AL032631-13|CAA21577.2| 220|Caenorhabditis elegans Hypothetical
protein Y106G6H.14 protein.
Length = 220
Score = 32.3 bits (70), Expect = 0.089
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 64 YRAMYKYRPQNPDELELNEGDTVYVL-EKCDDGWYVGS 174
YRA+Y ++ ++ EL +EGD +YV E+ + W+ S
Sbjct: 22 YRALYDFQARSAQELTFSEGDLMYVSDEQPNKDWFQAS 59
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 100 DELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFP 207
DEL +N GDTV VL +D W + T + G P
Sbjct: 266 DELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 100 DELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFP 207
DEL +N GDTV VL +D W + T + G P
Sbjct: 266 DELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
Score = 29.9 bits (64), Expect = 0.47
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 76 YKYRPQNPDELELNEGDTVYVLEKCDD 156
Y + PQ +++E+ EG+ + VL++ DD
Sbjct: 1470 YDFLPQGSNQVEVKEGEVIGVLQRTDD 1496
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 100 DELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFP 207
DEL +N GDTV VL +D W + T + G P
Sbjct: 266 DELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 100 DELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFP 207
DEL +N GDTV VL +D W + T + G P
Sbjct: 266 DELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
Score = 29.9 bits (64), Expect = 0.47
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 76 YKYRPQNPDELELNEGDTVYVLEKCDD 156
Y + PQ +++E+ EG+ + VL++ DD
Sbjct: 1470 YDFLPQGSNQVEVKEGEVIGVLQRTDD 1496
>AC093703-1|AAL00863.3| 346|Caenorhabditis elegans Hypothetical
protein Y20F4.3 protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 10 DLNNTEPLYVDTNAEAIPYRAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTG 189
D+ + L V + Y + ++ + DE+ GD + V E + GW +G ++ +G
Sbjct: 131 DIVDAYQLAVIPEIQETKYLCVRRFEQREIDEMNSEIGDILSVCETDETGWMLGRNETSG 190
Query: 190 RFG 198
G
Sbjct: 191 SVG 193
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 30.7 bits (66), Expect = 0.27
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPGKICKRI 228
A+Y Y+ ++P E+ + +GD + +L + W+ + R G P KRI
Sbjct: 990 ALYDYQEKSPREVSMKKGDVLTLLNASNRDWW--KVEVNDRQGFVPAAYVKRI 1040
>Z70035-10|CAA93871.2| 473|Caenorhabditis elegans Hypothetical
protein R09D1.12 protein.
Length = 473
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 4 GVDLNNTEPLY-VDTNAEAIPYRAMYKYRPQNPD 102
G++ N EP ++ AE +PY ++ +P N D
Sbjct: 127 GIESTNKEPTQPINERAEKLPYNPAFEIQPNNLD 160
>U97407-8|AAN84851.1| 397|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform b protein.
Length = 397
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 67 RAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPG 210
RA+Y + +EL GD + + ++ + W+ TGR GT G
Sbjct: 217 RALYDFEAAESNELSFVAGDIITITDESNPHWW------TGRIGTQQG 258
>U97407-7|AAB52480.2| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform a protein.
Length = 457
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 67 RAMYKYRPQNPDELELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPG 210
RA+Y + +EL GD + + ++ + W+ TGR GT G
Sbjct: 225 RALYDFEAAESNELSFVAGDIITITDESNPHWW------TGRIGTQQG 266
>AF188748-1|AAF00545.1| 198|Caenorhabditis elegans putative
tyrosine kinase receptorR09D1.12 protein.
Length = 198
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 4 GVDLNNTEPLY-VDTNAEAIPYRAMYKYRPQNPD 102
G++ N EP ++ AE +PY ++ +P N D
Sbjct: 70 GIESTNKEPTQPINERAEKLPYNPAFEIQPNNLD 103
>Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical
protein F46F3.4 protein.
Length = 769
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 70 AMYKYRPQNPDELELNEGDTVYVLE--KCDDGWYVGSSQRTGRFGTFP 207
A Y Y DEL + GD + V+E K D W+ + G G P
Sbjct: 691 AAYGYEAAFEDELSFDAGDELTVIEKDKVDKNWWT-CEKNNGEKGQVP 737
>Z66523-1|CAA91411.1| 361|Caenorhabditis elegans Hypothetical
protein M05D6.1 protein.
Length = 361
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 257 YLFDFGISQLILLQILPGKVPKR 189
Y+FDFG+S+ I+L GK+ R
Sbjct: 159 YIFDFGLSRQIMLPDASGKLKLR 181
>Z49966-3|CAA90241.1| 361|Caenorhabditis elegans Hypothetical
protein F35C11.3 protein.
Length = 361
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 257 YLFDFGISQLILLQILPGKVPKR 189
Y+FDFG+S+ I+L GK+ R
Sbjct: 159 YIFDFGLSRQIMLPDASGKLKLR 181
>U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase ii
(b) subunit protein2 protein.
Length = 1193
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 56 PYHIVRCTNTGLKILTSSN*TKVIRCTYWRNAT 154
PYH+ C N GL I+ ++ T C RN T
Sbjct: 1119 PYHVYVCNNCGL-IVVANLRTNSFECKACRNKT 1150
>AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical
protein Y116A8C.5 protein.
Length = 675
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 11 ILITPNPCTSTLMPKPYHIVRCTNTGLKILTSSN*TKVIRCT 136
+L +P TL P+ Y I+ TNT L ++N +IR T
Sbjct: 266 VLEMMSPDKRTLFPEVYQIMYLTNTSLFFGKNNNLETIIRNT 307
>U00031-4|AAK18867.1| 378|Caenorhabditis elegans Hypothetical
protein B0361.6 protein.
Length = 378
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = -1
Query: 231 VNSFANFTWEGTEAPSSLARADVPAIVAFLQYVHRITFVQFELVRILRPV 82
VN++ N TW+G P+ + L+Y+ +++ +L I +P+
Sbjct: 119 VNAYYNGTWQGNLIPAETNYEGCFYLAKILEYLECPQYLRKDLFPIQKPL 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,996,861
Number of Sequences: 27780
Number of extensions: 157368
Number of successful extensions: 545
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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