Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325D08f
         (336 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   1.7  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   1.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   3.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   5.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   5.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   5.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   5.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   5.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   5.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   5.3  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   7.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   7.0  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               20   9.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   9.2  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -3

Query: 217 KFYLGRYRSAQFSGSSRRTSHRRISPVRTPY 125
           K Y   Y S  FS     + HRRI     PY
Sbjct: 118 KPYQCEYCSKSFSVKENLSVHRRIHTKERPY 148


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = -1

Query: 318 TVSKYHLXPLYFRCCLKNQSVPF*FWNFTVNSFANFTWEGTEAPSSLA 175
           T S     P+ FRC  +N  +      F V   A    +GT    ++A
Sbjct: 360 TASSAATLPITFRCLEENNKIDSRVTRFVVAVGATVNMDGTALYEAVA 407


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -2

Query: 257 YLFDFGISQLILLQI-LPGKV 198
           YLF   IS LILL + LP ++
Sbjct: 78  YLFSLAISDLILLVLGLPNEL 98



 Score = 19.8 bits (39), Expect = 9.2
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -3

Query: 127 YHLRSVRARQDFEAGICTSHDMVWLRH*CRRTGVRC 20
           Y+L S++ R  F+  IC    ++  R    R    C
Sbjct: 328 YNLMSIKYRNAFKQTICCKTRIIGRRSWVTRESQIC 363


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 23  PNPCTSTLMPKPYHI 67
           P P T T    PYH+
Sbjct: 251 PKPQTKTKPTSPYHV 265


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 306 YHLXPLYFRCCLKNQSVPF*FWNFTVNSFAN 214
           Y + P    CC  ++ V F  W   VNS  N
Sbjct: 347 YVIVPFCPDCCPSDRMVYFITWLGYVNSALN 377


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 306 YHLXPLYFRCCLKNQSVPF*FWNFTVNSFAN 214
           Y + P    CC  ++ V F  W   VNS  N
Sbjct: 347 YVIVPFCPDCCPSDRMVYFITWLGYVNSALN 377


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 285 SKAXIGGTWIPSP 323
           SK  + GTW P P
Sbjct: 193 SKGCLVGTWSPDP 205


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 285 SKAXIGGTWIPSP 323
           SK  + GTW P P
Sbjct: 193 SKGCLVGTWSPDP 205


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 285 SKAXIGGTWIPSP 323
           SK  + GTW P P
Sbjct: 193 SKGCLVGTWSPDP 205


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 306 YHLXPLYFRCCLKNQSVPF*FWNFTVNSFAN 214
           Y + P    CC  ++ V F  W   VNS  N
Sbjct: 347 YVIVPFCPDCCPSDRMVYFITWLGYVNSALN 377


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein
          protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 78 VHRTIWYGFG 49
          VH  IW GFG
Sbjct: 58 VHVMIWIGFG 67


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +1

Query: 109  ELNEGDTVYVLEKCDDGWYVGSSQRTGRFGTFPG 210
            E+++G+ +YV  +    +Y+ S  +       PG
Sbjct: 941  EISDGEPLYVFVRSAPNFYMPSEPKAPMILVGPG 974


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 217 CKRINCEIPKSKRYRLI 267
           CK I  E P  K Y+L+
Sbjct: 99  CKSIQNEDPCEKAYQLV 115


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 206 GKVPKRPVLWLEPTYQPSSH 147
           G+VPKR    +    Q SSH
Sbjct: 141 GRVPKREKARILAAMQQSSH 160


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,246
Number of Sequences: 438
Number of extensions: 2219
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)