Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325D07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79756-5|CAB02115.1|  388|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AC024770-5|AAK84605.2|  684|Caenorhabditis elegans Hypothetical ...    28   3.5  
AC024818-3|AAF60780.2|  453|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z79756-5|CAB02115.1|  388|Caenorhabditis elegans Hypothetical
           protein F53C11.8 protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 17  IRHHSEFTYGLAWSPLRPHQLADCGWDS 100
           +R+H+    G+AW+P  PH +   G DS
Sbjct: 308 LRNHTGPVNGIAWAPHSPHHICTAGDDS 335


>AC024770-5|AAK84605.2|  684|Caenorhabditis elegans Hypothetical
           protein Y39H10A.6 protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 5   PLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFT 118
           P  ++  H      +AW+P  P  L  CG D+ + V++
Sbjct: 557 PRYSLVGHRGHVNAVAWNPADPTMLVSCGADATIRVWS 594


>AC024818-3|AAF60780.2|  453|Caenorhabditis elegans Hypothetical
           protein Y54H5A.1 protein.
          Length = 453

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 26  HSEFTYGLAWSPLRPHQLADCGWDSLVHVFTPRS 127
           H +    LAWSP     LA C  D  + ++  RS
Sbjct: 274 HKKSVEDLAWSPTETGLLASCSADGSIKLWDTRS 307


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,201,556
Number of Sequences: 27780
Number of extensions: 219632
Number of successful extensions: 573
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)