Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325D04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 275 1e-74
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 121 4e-28
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 121 4e-28
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 121 4e-28
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 120 5e-28
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 120 5e-28
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 120 5e-28
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 120 5e-28
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 120 5e-28
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 120 5e-28
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 120 6e-28
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 118 3e-27
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 118 3e-27
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 117 4e-27
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 117 6e-27
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 117 6e-27
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 115 2e-26
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 114 4e-26
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 113 5e-26
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 113 5e-26
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 111 3e-25
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 110 5e-25
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 109 2e-24
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 109 2e-24
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 108 3e-24
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 107 4e-24
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 107 5e-24
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 107 5e-24
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 106 8e-24
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 106 1e-23
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 105 1e-23
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 105 2e-23
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 102 1e-22
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 102 2e-22
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 100 5e-22
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 99 1e-21
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 99 2e-21
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 99 2e-21
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 99 2e-21
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 96 2e-20
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 95 2e-20
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 94 6e-20
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 92 2e-19
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 91 3e-19
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 91 3e-19
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 91 6e-19
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 91 6e-19
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 90 8e-19
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 89 1e-18
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 89 1e-18
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 89 2e-18
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 88 3e-18
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 85 2e-17
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 83 1e-16
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 83 2e-16
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 81 5e-16
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 71 7e-13
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 71 7e-13
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 71 7e-13
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 71 7e-13
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 71 7e-13
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 71 7e-13
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 71 7e-13
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 70 1e-12
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 70 1e-12
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 68 4e-12
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 67 6e-12
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 67 6e-12
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 67 8e-12
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 67 8e-12
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 66 1e-11
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 66 1e-11
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 66 1e-11
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 66 1e-11
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 64 4e-11
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 64 6e-11
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 64 8e-11
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 62 2e-10
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 62 3e-10
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 57 7e-09
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 57 7e-09
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 57 9e-09
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 55 3e-08
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 54 8e-08
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 53 1e-07
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 51 4e-07
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 50 1e-06
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 37 7e-06
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 47 9e-06
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 43 2e-04
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 41 5e-04
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 39 0.002
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 39 0.002
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 37 0.010
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 36 0.013
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 35 0.031
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 35 0.031
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 33 0.094
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 33 0.16
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 31 0.38
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 30 0.87
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z83129-6|CAB63324.1| 101|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z83114-1|CAB63234.1| 549|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 29 2.0
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 29 2.7
U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-bie... 28 3.5
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 28 3.5
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 28 3.5
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 28 3.5
Z50874-8|CAA90768.1| 197|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z82272-8|CAB05223.1| 337|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z82260-13|CAB05143.1| 337|Caenorhabditis elegans Hypothetical p... 27 6.2
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 27 6.2
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 27 8.1
Z49909-8|CAA90111.1| 204|Caenorhabditis elegans Hypothetical pr... 27 8.1
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 27 8.1
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 27 8.1
AF000263-17|AAG00013.1| 179|Caenorhabditis elegans Hypothetical... 27 8.1
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 275 bits (674), Expect = 1e-74
Identities = 127/157 (80%), Positives = 144/157 (91%), Gaps = 1/157 (0%)
Frame = +3
Query: 54 SRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 233
+RKK LLKVIILGDSGVGKTSLMNQ+VN++FSNQYKATIGADFLT++V +DDR VT+QIW
Sbjct: 4 TRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIW 63
Query: 234 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVI 413
DTAGQERFQSLGVAFYRGADCCVL FDVT +FKSL+SWRDEFLIQASPRDPD+FPFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVL 123
Query: 414 LGNKVDLDN-RAVSVKRGQQWCQSKNDIPYFETSAKE 521
LGNKVDL++ RAVS KR Q WCQ+K +IPY+E SAKE
Sbjct: 124 LGNKVDLESQRAVSSKRAQSWCQTKGNIPYYEVSAKE 160
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 121 bits (291), Expect = 4e-28
Identities = 61/149 (40%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K+++LG+S VGK+SL+ +FV +F ++TIGA FLT+ V +DD + +IWDTAGQER
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQER 80
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
+ SL +YRGA ++V+D+T +F+ ++W E QASP N + GNK D+
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASP----NIVMALAGNKADV 136
Query: 435 DN-RAVSVKRGQQWCQSKNDIPYFETSAK 518
N R V + + + N + + ETSAK
Sbjct: 137 ANKRTVEYEEANAYAED-NALLFMETSAK 164
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 121 bits (291), Expect = 4e-28
Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 10/159 (6%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD---------RIVT 221
L+K + LGDSGVGKTS ++++ + F+ Q+ +T+G DF K+V+ + V
Sbjct: 7 LIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVL 66
Query: 222 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 401
+Q+WDTAGQERF+SL AF+R A +L+FD+T +F ++ W + + A PD
Sbjct: 67 LQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPD-- 124
Query: 402 PFVILGNKVDLDN-RAVSVKRGQQWCQSKNDIPYFETSA 515
+I GNK DL+N R VS R +Q +PYFETSA
Sbjct: 125 -IIICGNKADLENRRQVSTARAKQLADQLG-LPYFETSA 161
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 121 bits (291), Expect = 4e-28
Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 10/159 (6%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD---------RIVT 221
L+K + LGDSGVGKTS ++++ + F+ Q+ +T+G DF K+V+ + V
Sbjct: 7 LIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVL 66
Query: 222 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 401
+Q+WDTAGQERF+SL AF+R A +L+FD+T +F ++ W + + A PD
Sbjct: 67 LQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPD-- 124
Query: 402 PFVILGNKVDLDN-RAVSVKRGQQWCQSKNDIPYFETSA 515
+I GNK DL+N R VS R +Q +PYFETSA
Sbjct: 125 -IIICGNKADLENRRQVSTARAKQLADQLG-LPYFETSA 161
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 120 bits (290), Expect = 5e-28
Identities = 62/149 (41%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K++ LG+ VGKTS++ +F+ F N Y+ATIG DFL+K + ++DR + +Q+WDTAGQER
Sbjct: 13 KLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 72
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
F+SL ++ R + V+V+D+T N+F W D+ + R D V++GNK DL
Sbjct: 73 FRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDV---RNERGCDVI-IVLVGNKTDL 128
Query: 435 -DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
D R VS + G++ + N + + ETSAK
Sbjct: 129 ADKRQVSTEDGEKKARDLN-VMFIETSAK 156
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 120 bits (290), Expect = 5e-28
Identities = 60/152 (39%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V D+ V +QIWDTAGQ
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQ 81
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ER++++ A+YRGA +L++D+T +F S++ W Q +N V++GNK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----CTQIKTYSWENAQVVLVGNKC 137
Query: 429 DLDN-RAVSVKRGQQWCQSKNDIPYFETSAKE 521
D+D+ R VS+ RG+Q + +FETSAKE
Sbjct: 138 DMDSERVVSMDRGRQLADQLG-LEFFETSAKE 168
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 120 bits (290), Expect = 5e-28
Identities = 60/152 (39%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V D+ V +QIWDTAGQ
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQ 81
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ER++++ A+YRGA +L++D+T +F S++ W Q +N V++GNK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----CTQIKTYSWENAQVVLVGNKC 137
Query: 429 DLDN-RAVSVKRGQQWCQSKNDIPYFETSAKE 521
D+D+ R VS+ RG+Q + +FETSAKE
Sbjct: 138 DMDSERVVSMDRGRQLADQLG-LEFFETSAKE 168
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 120 bits (290), Expect = 5e-28
Identities = 60/152 (39%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V D+ V +QIWDTAGQ
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQ 81
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ER++++ A+YRGA +L++D+T +F S++ W Q +N V++GNK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----CTQIKTYSWENAQVVLVGNKC 137
Query: 429 DLDN-RAVSVKRGQQWCQSKNDIPYFETSAKE 521
D+D+ R VS+ RG+Q + +FETSAKE
Sbjct: 138 DMDSERVVSMDRGRQLADQLG-LEFFETSAKE 168
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 120 bits (290), Expect = 5e-28
Identities = 60/152 (39%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V D+ V +QIWDTAGQ
Sbjct: 36 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQ 95
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ER++++ A+YRGA +L++D+T +F S++ W Q +N V++GNK
Sbjct: 96 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----CTQIKTYSWENAQVVLVGNKC 151
Query: 429 DLDN-RAVSVKRGQQWCQSKNDIPYFETSAKE 521
D+D+ R VS+ RG+Q + +FETSAKE
Sbjct: 152 DMDSERVVSMDRGRQLADQLG-LEFFETSAKE 182
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 120 bits (290), Expect = 5e-28
Identities = 60/152 (39%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V D+ V +QIWDTAGQ
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQ 81
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ER++++ A+YRGA +L++D+T +F S++ W Q +N V++GNK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----CTQIKTYSWENAQVVLVGNKC 137
Query: 429 DLDN-RAVSVKRGQQWCQSKNDIPYFETSAKE 521
D+D+ R VS+ RG+Q + +FETSAKE
Sbjct: 138 DMDSERVVSMDRGRQLADQLG-LEFFETSAKE 168
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 120 bits (289), Expect = 6e-28
Identities = 62/149 (41%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K++ LG+ VGKTSL+ +F+ F N Y+ATIG DFL+K + ++DR V +Q+WDTAGQER
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 71
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
F+SL ++ R + V+V+D+T N+F W D+ + R D +++GNK DL
Sbjct: 72 FRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDV---RTERGSDVI-IMLVGNKTDL 127
Query: 435 -DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
D R V+ G++ + N + + ETSAK
Sbjct: 128 SDKRQVTTDEGERKAKELN-VMFIETSAK 155
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 118 bits (284), Expect = 3e-27
Identities = 61/156 (39%), Positives = 95/156 (60%)
Frame = +3
Query: 51 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 230
SS LK++I+G+SGVGK+SLM +FV+ F + ATIG DF + +D V + I
Sbjct: 5 SSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAI 64
Query: 231 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 410
WDTAGQERF++L ++YRGA + V+DVT+ ++F+ L W E + DN +
Sbjct: 65 WDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCT---NDNIIKM 121
Query: 411 ILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAK 518
++ NK+D+ NR V+ + G ++ + + + E SAK
Sbjct: 122 MVANKIDMPNRVVTREEGLKFAKRHRTL-FIEASAK 156
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 118 bits (283), Expect = 3e-27
Identities = 59/161 (36%), Positives = 98/161 (60%), Gaps = 1/161 (0%)
Frame = +3
Query: 39 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIV 218
+ M+ L K++++GDSGVGK+ L+ +F + ++ Y +TIG DF + + +D + +
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60
Query: 219 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDN 398
+QIWDTAGQERF+++ ++YRGA ++V+D+T TF +++ W E A +N
Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYAC----EN 116
Query: 399 FPFVILGNKVDLD-NRAVSVKRGQQWCQSKNDIPYFETSAK 518
+++GNK DL RAV + Q + + IP+ ETSAK
Sbjct: 117 VNKLLVGNKCDLTAKRAVETQAAQDYA-GQLGIPFLETSAK 156
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 117 bits (282), Expect = 4e-27
Identities = 58/150 (38%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
L KV+++GDSGVGK++L+++F +F+ + K+TIG +F T+ + V+ + V QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQ 70
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ER++++ A+YRGA +LV+D+ T++++E W E A N +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD----QNIVIMLVGNKS 126
Query: 429 DLDN-RAVSVKRGQQWCQSKNDIPYFETSA 515
DL + RAV + + + +N + + ETSA
Sbjct: 127 DLRHLRAVPTDEAKIYAE-RNQLSFIETSA 155
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 117 bits (281), Expect = 6e-27
Identities = 60/151 (39%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
L K II+GD+GVGK+ L+ QF +K+F + TIG +F + V +D + + +QIWDTAGQ
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQ 65
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
E F+S+ ++YRGA +LV+D+T +TF L SW ++ A N +++GNK
Sbjct: 66 ESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLED----ARQHSNSNMVIMLIGNKS 121
Query: 429 DLD-NRAVSVKRGQQWCQSKNDIPYFETSAK 518
DL+ R V + G+ + + ++ + + ETSAK
Sbjct: 122 DLEARREVKREEGEAFAR-EHGLVFMETSAK 151
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 117 bits (281), Expect = 6e-27
Identities = 62/152 (40%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
L K++I+GDSGVGK+SL+ +F + FS Y TIG DF + + ++ + V +QIWDTAGQ
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQ 69
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ERF+++ +YRG V+V+DVT +F +++ W +Q + D+ V++GNK
Sbjct: 70 ERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRW-----LQEIENNCDSVQKVLVGNKC 124
Query: 429 DLDNRAVSVKR-GQQWCQSKNDIPYFETSAKE 521
+ + R V ++ + + QS N I +FETSAKE
Sbjct: 125 EENERRVVLESDARNYAQSMN-ISFFETSAKE 155
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 115 bits (276), Expect = 2e-26
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
L K++++GD GVGKT ++ +F N F ++ TIG DF K ++VD + V +QIWDT GQ
Sbjct: 10 LFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQ 69
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ERF+++ ++YR A+ VL +D+T +F SL+ W D+ A+P N +++G K
Sbjct: 70 ERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAP----NVVKLLIGTKC 125
Query: 429 DL-DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
DL D RA+ + + ++ ETSAK
Sbjct: 126 DLEDQRAIEAEEAEMLQRANGMFAMLETSAK 156
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 114 bits (274), Expect = 4e-26
Identities = 60/152 (39%), Positives = 96/152 (63%), Gaps = 1/152 (0%)
Frame = +3
Query: 66 LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAG 245
+L K++++GDSGVGKT ++ +F + F+ + +TIG DF K + + + + +QIWDTAG
Sbjct: 8 MLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAG 67
Query: 246 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 425
QERF ++ ++YRGA +LV+D+T +F ++ W AS ++ +ILGNK
Sbjct: 68 QERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS----EDVVKMILGNK 123
Query: 426 VDL-DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
D+ D R VS +RG++ Q + I + ETSAK
Sbjct: 124 CDMSDRRVVSRERGEKIAQD-HGISFHETSAK 154
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 113 bits (273), Expect = 5e-26
Identities = 58/158 (36%), Positives = 98/158 (62%), Gaps = 1/158 (0%)
Frame = +3
Query: 48 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 227
M+ L K++++GDSGVGKT ++ +F + F+N + +TIG DF + + +D + + +Q
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 228 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 407
IWDTAGQERF+++ A+YRGA +LV+D+T +F+++++W + +
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNW----IRNIEEHAASDVER 116
Query: 408 VILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
+I+GNK D+ + R VS RG+Q + + ETSAK
Sbjct: 117 MIIGNKCDIEERREVSRDRGEQ-LAIEYGTKFLETSAK 153
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 113 bits (273), Expect = 5e-26
Identities = 58/158 (36%), Positives = 98/158 (62%), Gaps = 1/158 (0%)
Frame = +3
Query: 48 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 227
M+ L K++++GDSGVGKT ++ +F + F+N + +TIG DF + + +D + + +Q
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 228 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 407
IWDTAGQERF+++ A+YRGA +LV+D+T +F+++++W + +
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNW----IRNIEEHAASDVER 116
Query: 408 VILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
+I+GNK D+ + R VS RG+Q + + ETSAK
Sbjct: 117 MIIGNKCDIEERREVSRDRGEQ-LAIEYGTKFLETSAK 153
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 111 bits (267), Expect = 3e-25
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
+ K II+GD GVGK+ L++QF KKF TIG +F T+ + V + + +QIWDTAGQ
Sbjct: 11 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQ 70
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ERF+++ ++YRGA ++V+D+T +T+ L SW L A N ++GNK
Sbjct: 71 ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSW----LADAKSLTNPNTAIFLIGNKA 126
Query: 429 DL-DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
DL D R V + + + + +N + + E SAK
Sbjct: 127 DLEDQRDVPYEEAKAFAE-ENGLTFLECSAK 156
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 110 bits (265), Expect = 5e-25
Identities = 61/153 (39%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV-IVDDRIVTMQIWDTAG 245
+ KV+ +GDS VGKT +++F + +F + ATIG DF K + I +R + MQ+WDTAG
Sbjct: 202 IFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAG 261
Query: 246 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 425
QERF+S+ ++R AD VL+FDVT+ +F ++ +W D ++A D ++GNK
Sbjct: 262 QERFRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDS--VRAGVDDAT--VMCLVGNK 317
Query: 426 VDL---DNRAVSVKRGQQWCQSKNDIPYFETSA 515
+DL D +V R + + IP+FETSA
Sbjct: 318 MDLFGSDIARSAVYRAAEKLAVEFKIPFFETSA 350
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 109 bits (261), Expect = 2e-24
Identities = 56/163 (34%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Frame = +3
Query: 39 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR-I 215
+ +++ K+ KV+++GD GVGKTS++ +FV+ FS+ YK TIG DF K + VD+ +
Sbjct: 1 MAALTNNDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTV 60
Query: 216 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 395
V +QIWD +GQ+R+ + +Y+ A ++V D T T + W+ + + + D
Sbjct: 61 VHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGS 120
Query: 396 NFPFVILGNKVDLDNRAVSVKRGQQWCQSKND-IPYFETSAKE 521
P ++L NK D+DN+ K ++ N + F TSAKE
Sbjct: 121 PVPAILLANKCDIDNKLGDDKLYD--LETNNGFVGSFRTSAKE 161
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 109 bits (261), Expect = 2e-24
Identities = 56/163 (34%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Frame = +3
Query: 39 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR-I 215
+ +++ K+ KV+++GD GVGKTS++ +FV+ FS+ YK TIG DF K + VD+ +
Sbjct: 1 MAALTNNDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTV 60
Query: 216 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 395
V +QIWD +GQ+R+ + +Y+ A ++V D T T + W+ + + + D
Sbjct: 61 VHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGS 120
Query: 396 NFPFVILGNKVDLDNRAVSVKRGQQWCQSKND-IPYFETSAKE 521
P ++L NK D+DN+ K ++ N + F TSAKE
Sbjct: 121 PVPAILLANKCDIDNKLGDDKLYD--LETNNGFVGSFRTSAKE 161
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 108 bits (259), Expect = 3e-24
Identities = 56/156 (35%), Positives = 99/156 (63%), Gaps = 1/156 (0%)
Frame = +3
Query: 57 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWD 236
+K K+++LG+ VGK+SL+ +FV KFS ++ +TI A F K V V+D + IWD
Sbjct: 8 QKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWD 67
Query: 237 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 416
TAGQE++ +LG +YRG++ +LVFD+T +F+ +++W +++ + +I+
Sbjct: 68 TAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNW----VLEIKTCLGNTAEILIV 123
Query: 417 GNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKE 521
GNK+DL + R V+ + + + +S+ + Y ETSA++
Sbjct: 124 GNKIDLEEERQVTRQDAEAYAESEGAL-YMETSAQD 158
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 107 bits (258), Expect = 4e-24
Identities = 64/153 (41%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
Frame = +3
Query: 63 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 242
K L KV+++G++GVGKT L+ +F F ATIG DF+ K V V + + +QIWDTA
Sbjct: 5 KYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTA 64
Query: 243 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN 422
GQERF+S+ ++YR A VLV+DV+ +F L W E A+ R +++GN
Sbjct: 65 GQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRR----VLKILVGN 120
Query: 423 KVDL-DNRAVSVKRGQQWCQSKNDIPYF-ETSA 515
KVD D R V + G+ + N YF ETSA
Sbjct: 121 KVDKGDEREVPERIGRDF-SDVNQFDYFLETSA 152
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 107 bits (257), Expect = 5e-24
Identities = 58/152 (38%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
Frame = +3
Query: 66 LLLKVIILGDSGVGKTSLMNQFVNKKF-SNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 242
+ LKV++LGDS GKT L+ ++ + F +N + +T+G D+ K + + D+ V +QIWDTA
Sbjct: 1 MFLKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTA 60
Query: 243 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN 422
GQERF+S+ ++YR AD +LV+D+ +F++ +W L Q + ++GN
Sbjct: 61 GQERFRSVTTSYYRDADALLLVYDIANRASFENCRNW----LSQIKEYGKEAVQVTLVGN 116
Query: 423 KVDLDNRAVSVKRGQQWCQSKNDIPYFETSAK 518
K DL RAV G++ ++ IP+ ETSAK
Sbjct: 117 KCDLP-RAVPTDEGKRLAEA-YQIPFMETSAK 146
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 107 bits (257), Expect = 5e-24
Identities = 58/152 (38%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
Frame = +3
Query: 66 LLLKVIILGDSGVGKTSLMNQFVNKKF-SNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 242
+ LKV++LGDS GKT L+ ++ + F +N + +T+G D+ K + + D+ V +QIWDTA
Sbjct: 1 MFLKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTA 60
Query: 243 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN 422
GQERF+S+ ++YR AD +LV+D+ +F++ +W L Q + ++GN
Sbjct: 61 GQERFRSVTTSYYRDADALLLVYDIANRASFENCRNW----LSQIKEYGKEAVQVTLVGN 116
Query: 423 KVDLDNRAVSVKRGQQWCQSKNDIPYFETSAK 518
K DL RAV G++ ++ IP+ ETSAK
Sbjct: 117 KCDLP-RAVPTDEGKRLAEA-YQIPFMETSAK 146
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 106 bits (255), Expect = 8e-24
Identities = 55/156 (35%), Positives = 95/156 (60%)
Frame = +3
Query: 48 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 227
M + L K++++G+ GVGK++L+++F +F+ + K TIG +F TK + V+ + V +Q
Sbjct: 1 MGNEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQ 60
Query: 228 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 407
IWDTAG ERF+ ++YRGA +LV+D++ T++S+E W A+ ++
Sbjct: 61 IWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHAN----EDIVI 116
Query: 408 VILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSA 515
++GNK DL + AV + + + +N I + ETSA
Sbjct: 117 TLVGNKSDL-SHAVPTDEAKIYAE-RNHISFIETSA 150
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 106 bits (254), Expect = 1e-23
Identities = 49/120 (40%), Positives = 82/120 (68%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
++++ GD+ VGK+S + + + ++F+NQ +T+G DF K V VD R V +Q+WDTAGQER
Sbjct: 463 RIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQER 522
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
F+SL +++R AD +LV+DV A +F + W E + +++ R + P +++GNKVD+
Sbjct: 523 FRSLCKSYFRRADGAILVYDVCAEQSFLRVRDW-IETIKESTER---SIPIILVGNKVDM 578
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 105 bits (253), Expect = 1e-23
Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Frame = +3
Query: 57 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWD 236
++K KVII+G++ VGKT L +F +F +ATIG DF + ++++ ++ +Q+WD
Sbjct: 96 KQKRTFKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWD 155
Query: 237 TAGQERF-QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVI 413
TAGQER+ QS+ +YR + V V+DVT +F L W E D + P ++
Sbjct: 156 TAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSE-VPRIL 214
Query: 414 LGNKVDLD-NRAVSVKRGQQWCQSKNDIPYFETSAK 518
+GNK D++ VS Q + +N++ FETSAK
Sbjct: 215 IGNKCDVECTNRVSTDEAQMFA-DRNNMALFETSAK 249
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 105 bits (252), Expect = 2e-23
Identities = 49/121 (40%), Positives = 79/121 (65%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
L KV+++GDSGVGK++L+++F +F + K+TIG +F T+ + V+ + V QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQ 70
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ER++++ A+YRGA +LV+D+ T++++E W E A N + +GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD----QNIVIMPVGNKC 126
Query: 429 D 431
D
Sbjct: 127 D 127
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 102 bits (245), Expect = 1e-22
Identities = 42/102 (41%), Positives = 73/102 (71%)
Frame = +3
Query: 48 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 227
M+ L K++++GDSGVGKT ++ +F + F+N + +TIG DF + + +D + + +Q
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 228 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW 353
IWDTAGQERF+++ A+YRGA +LV+D+T +F+++++W
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNW 102
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 102 bits (244), Expect = 2e-22
Identities = 53/151 (35%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
+ K +I+GD GVGK++L+ +F ++ F + T+G +F K++ +D V +++WDT GQ
Sbjct: 6 MFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQ 65
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
E F+S+ A+YR A +LV+D+T +F LE W + P +++GNK
Sbjct: 66 ENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHP----EMVIMLIGNKS 121
Query: 429 DLDN-RAVSVKRGQQWCQSKNDIPYFETSAK 518
DL R V+ + G+ + + KN + + ETSAK
Sbjct: 122 DLKAVRDVTTEEGEAFAK-KNGLTFMETSAK 151
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 100 bits (240), Expect = 5e-22
Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
+ K +I+GD GVGK++L+ +F+ K F + + +T+G +F + + +D + V + +WDT GQ
Sbjct: 6 VFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQ 65
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ERF+SL ++YR A +LV+D+T+ +F LE W + DPD V++GNK
Sbjct: 66 ERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDL---QRLGDPD-IVIVLIGNKS 121
Query: 429 DLD-NRAVSVKRGQQWCQSKNDIPYFETSAK 518
DL+ +R V + G+ + + I + E SAK
Sbjct: 122 DLEADREVRKEEGEAFAREFGLI-FMEISAK 151
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 99 bits (238), Expect = 1e-21
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 5/159 (3%)
Frame = +3
Query: 51 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR----IV 218
S+ K KV++LGDSGVGKTS++ + ATIGA F++ +V D R +V
Sbjct: 46 STAPKHKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVV 105
Query: 219 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDN 398
+Q+WDTAGQERF+ + + R AD ++V+DVT NTF+ +E W + + D +
Sbjct: 106 RLQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANV 165
Query: 399 FPFVILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETS 512
+ ++GNK DL + R V+ G+ +K + +FE S
Sbjct: 166 Y---LIGNKTDLVEKREVTEAEGKAMA-AKINAKFFELS 200
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 98.7 bits (235), Expect = 2e-21
Identities = 50/156 (32%), Positives = 89/156 (57%)
Frame = +3
Query: 51 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 230
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD+ + ++I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVDEDLCKLEI 69
Query: 231 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 410
DTAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+FP +
Sbjct: 70 LDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDFPII 126
Query: 411 ILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAK 518
++GNK DL+N + + + IPY E SAK
Sbjct: 127 LVGNKADLENERHVARHEAEELAHRLSIPYLECSAK 162
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 98.7 bits (235), Expect = 2e-21
Identities = 50/156 (32%), Positives = 89/156 (57%)
Frame = +3
Query: 51 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 230
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD+ + ++I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVDEDLCKLEI 69
Query: 231 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 410
DTAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+FP +
Sbjct: 70 LDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDFPII 126
Query: 411 ILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAK 518
++GNK DL+N + + + IPY E SAK
Sbjct: 127 LVGNKADLENERHVARHEAEELAHRLSIPYLECSAK 162
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 98.7 bits (235), Expect = 2e-21
Identities = 50/156 (32%), Positives = 89/156 (57%)
Frame = +3
Query: 51 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 230
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD+ + ++I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVDEDLCKLEI 69
Query: 231 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 410
DTAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+FP +
Sbjct: 70 LDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDFPII 126
Query: 411 ILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAK 518
++GNK DL+N + + + IPY E SAK
Sbjct: 127 LVGNKADLENERHVARHEAEELAHRLSIPYLECSAK 162
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/120 (38%), Positives = 76/120 (63%)
Frame = +3
Query: 66 LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAG 245
+L K++++GDSGVGKT ++ +F + F+ + +TIG DF K + + + + +QIWDTAG
Sbjct: 8 MLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAG 67
Query: 246 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 425
QERF ++ ++YRGA +LV+D+T +F ++ W AS ++ +ILGNK
Sbjct: 68 QERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS----EDVVKMILGNK 123
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-20
Identities = 48/148 (32%), Positives = 81/148 (54%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K++++GD G GKT+ + + + +F +Y AT+G + + + +WDTAGQE+
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEK 70
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
F L +Y C +++FDVTA T+K++ +W + R +N P V+ GNKVD+
Sbjct: 71 FGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDL-----ARVCENIPIVLCGNKVDV 125
Query: 435 DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
+R V K K ++ Y++ SAK
Sbjct: 126 KDRKVKAK--TITFHRKKNLQYYDISAK 151
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 93.9 bits (223), Expect = 6e-20
Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K+++LG GVGK++L QFV F +Y TI D K+V VD + ++I DTAG E+
Sbjct: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQ 63
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
F ++ + + VLV+ +TA +TF L RD+ L +D D P +++GNK DL
Sbjct: 64 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQIL---RVKDTDEVPMILVGNKCDL 120
Query: 435 -DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
D R V +GQ + + ETSAK
Sbjct: 121 EDERVVGKDQGQNLARQFGS-AFLETSAK 148
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 92.3 bits (219), Expect = 2e-19
Identities = 46/150 (30%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRI-VTMQIWDTAGQE 251
++I++GDS VGK+SL+ F K + T+G DF + + + V +Q+WDTAGQE
Sbjct: 19 RLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQE 78
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+F+S+ ++YR + + ++D T +F+ +E+W E + P F ++G K D
Sbjct: 79 KFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSD 138
Query: 432 LDN-RAVSVKRGQQWCQSKNDIPYFETSAK 518
+D+ R V+ + G+ + + + + + ETS++
Sbjct: 139 MDSQRQVNYEEGEYFAK-YHKMKFIETSSR 167
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 91.5 bits (217), Expect = 3e-19
Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 1/150 (0%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K++++GD GVGK+SL QF K+F + Y TI ++ + +D V M + DTAGQE
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYI-QHCEIDGNWVIMDVLDTAGQEE 77
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
F ++ + RG +LVF VT +F+ ++ L +D +P +++ NKVDL
Sbjct: 78 FSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVL---RVKDRSEYPVLLVANKVDL 134
Query: 435 DN-RAVSVKRGQQWCQSKNDIPYFETSAKE 521
N R VS + G++ ++ + Y ETSAKE
Sbjct: 135 INQRVVSEQEGRE-LAAQLKLMYIETSAKE 163
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 91.5 bits (217), Expect = 3e-19
Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 1/150 (0%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K++++GD GVGK+SL QF K+F + Y TI ++ + +D V M + DTAGQE
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYI-QHCEIDGNWVIMDVLDTAGQEE 77
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
F ++ + RG +LVF VT +F+ ++ L +D +P +++ NKVDL
Sbjct: 78 FSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVL---RVKDRSEYPVLLVANKVDL 134
Query: 435 DN-RAVSVKRGQQWCQSKNDIPYFETSAKE 521
N R VS + G++ ++ + Y ETSAKE
Sbjct: 135 INQRVVSEQEGRE-LAAQLKLMYIETSAKE 163
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 90.6 bits (215), Expect = 6e-19
Identities = 48/148 (32%), Positives = 84/148 (56%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K++++GD GVGK++L Q + F +Y TI D K+V++D + I DTAGQE
Sbjct: 5 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEE 63
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
+ ++ + R + +LVF V +F+++ ++R++ +D D+ P V++GNK DL
Sbjct: 64 YSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQI---RRVKDSDDVPMVLVGNKCDL 120
Query: 435 DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
+R+V + + + IP +TSAK
Sbjct: 121 SSRSVDFRTVSETAKGYG-IPNVDTSAK 147
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 90.6 bits (215), Expect = 6e-19
Identities = 48/148 (32%), Positives = 84/148 (56%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K++++GD GVGK++L Q + F +Y TI D K+V++D + I DTAGQE
Sbjct: 8 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEE 66
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
+ ++ + R + +LVF V +F+++ ++R++ +D D+ P V++GNK DL
Sbjct: 67 YSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQI---RRVKDSDDVPMVLVGNKCDL 123
Query: 435 DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
+R+V + + + IP +TSAK
Sbjct: 124 SSRSVDFRTVSETAKGYG-IPNVDTSAK 150
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 90.2 bits (214), Expect = 8e-19
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 1/150 (0%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD-RIVTMQIWDTAGQ 248
+KV+++G+SG GKT+L+ F++ F TIG DF K V ++D + + +Q+WDTAGQ
Sbjct: 7 VKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQ 66
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ERF+ L A+ R A +LV D++ N + L W+ +I + D + +I+GNK
Sbjct: 67 ERFRQLAPAYIRSARVALLVIDLSDENCVEHLIRWKG--IIDKNKSDFTS--TIIVGNKH 122
Query: 429 DLDNRAVSVKRGQQWCQSKNDIPYFETSAK 518
DL + S R + ND Y ETSAK
Sbjct: 123 DLVSEKRS-PRLTAIIRETND-EYIETSAK 150
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 89.4 bits (212), Expect = 1e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 9/67 (13%)
Frame = +3
Query: 54 SRKKLLLKVIILGDSGVGKTSLMNQF---------VNKKFSNQYKATIGADFLTKEVIVD 206
+RKK LLKVIILGDSGVGKTSLMNQ+ VN++F NQYKATIGADFLT++V +D
Sbjct: 4 TRKKALLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNID 63
Query: 207 DRIVTMQ 227
DR VT+Q
Sbjct: 64 DRTVTLQ 70
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 89.4 bits (212), Expect = 1e-18
Identities = 43/130 (33%), Positives = 79/130 (60%)
Frame = +3
Query: 51 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 230
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD+ + ++I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVDEDLCKLEI 69
Query: 231 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 410
DTAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+FP +
Sbjct: 70 LDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDFPII 126
Query: 411 ILGNKVDLDN 440
++GNK DL+N
Sbjct: 127 LVGNKADLEN 136
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 89.0 bits (211), Expect = 2e-18
Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
KV++LG GVGK++L QFV+ F +Y TI DF KE+ VD + ++I DTAG E+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVSSTFIEKYDPTI-EDFYRKEIEVDGQPSVLEILDTAGTEQ 63
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
F S+ + + V+V+ +T+ TF + + +++ + + +N P +++GNK DL
Sbjct: 64 FSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIV---RVKGSENVPILLVGNKCDL 120
Query: 435 DN-RAVSVKRGQQWCQSKNDIPYFETSAK 518
+ R V + G +S + P+ E SAK
Sbjct: 121 SHQRQVRSEEGLALAESWS-CPFTECSAK 148
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 88.2 bits (209), Expect = 3e-18
Identities = 44/151 (29%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
L K++++GD GK+ ++ +F F + +T+G DF K + + + +++WDTAG
Sbjct: 6 LFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGM 65
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 428
ER++++ ++Y A + V+D+T +F++LE + +L + P N +++GNK
Sbjct: 66 ERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKY---WLKEIKQHAPPNAVLMLVGNKA 122
Query: 429 DLD-NRAVSVKRGQQWCQSKNDIPYFETSAK 518
D+D R V R ++ S+ + +E SAK
Sbjct: 123 DMDQERKVDFDRAEK-LASRLGVSLYEVSAK 152
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 85.4 bits (202), Expect = 2e-17
Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 2/150 (1%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K+++LG+ GVGK++L Q+V F + Y ATI D K VD ++I DTAG E+
Sbjct: 5 KIVVLGNGGVGKSALTLQYVQGIFVHTYDATI-EDSYRKLSKVDAENARLEILDTAGTEQ 63
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKVD 431
F + +YR A VLVF + +TF++L +++ D I+ P +++GNK D
Sbjct: 64 FTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGK-----EVPMILVGNKSD 118
Query: 432 L-DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
L + R V + + K IPYFETSA+
Sbjct: 119 LAETRQVDESEAHNFAE-KLKIPYFETSAR 147
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 83.0 bits (196), Expect = 1e-16
Identities = 52/159 (32%), Positives = 89/159 (55%), Gaps = 5/159 (3%)
Frame = +3
Query: 57 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWD 236
+++++ KVI++G GVGK++L QF+ +F +Y+ T AD K+V++D ++ I D
Sbjct: 13 QQQVVHKVIMVGTGGVGKSALTLQFMYDEFVEEYEPT-KADSYRKKVVLDGEECSIDILD 71
Query: 237 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 416
TAGQE + ++ +YR + + VF + +F++ +R++ L + P V++
Sbjct: 72 TAGQEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQIL--RVKNSDSSVPIVLV 129
Query: 417 GNKVDL-DNRAVSV----KRGQQWCQSKNDIPYFETSAK 518
GNK D+ D R VS +R +QW Y ETSAK
Sbjct: 130 GNKGDMRDQRVVSAELCRQRAEQW-----GCHYVETSAK 163
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 82.6 bits (195), Expect = 2e-16
Identities = 44/153 (28%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRI-VTMQIWDTAG 245
++K++++GD GKTS+ +F + F Y T+G DF ++ + + + V +Q+WD G
Sbjct: 35 VIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGG 94
Query: 246 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDN-FPFVILGN 422
Q + + GA+ LV+DVT +F++ W +++ + + + V++GN
Sbjct: 95 QSIAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLS--VVKKNTKSSETPVKLVLMGN 152
Query: 423 KVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAK 518
K DL + R VSV+ + + S + +P + SAK
Sbjct: 153 KTDLEERRVVSVEAHKNFATSNDMMPTY-VSAK 184
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 81.0 bits (191), Expect = 5e-16
Identities = 40/105 (38%), Positives = 62/105 (59%)
Frame = +3
Query: 120 MNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCC 299
M +FV+ F + ATIG DF + +D V + IWDTAGQERF++L ++YRGA
Sbjct: 1 MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGV 60
Query: 300 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
+ V+DVT+ ++F+ L W E + DN +++ NK+D+
Sbjct: 61 ICVYDVTSRSSFEKLNHWMQEVDTYCT---NDNIIKMMVANKIDM 102
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 70.5 bits (165), Expect = 7e-13
Identities = 38/125 (30%), Positives = 68/125 (54%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT ++ + F QY T+ D + ++ +D +V + +WDTAGQE
Sbjct: 8 IKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV-FDNYSAQMSLDGNVVNLGLWDTAGQE 66
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ L Y D +L F V +P +F ++ S +++ + PD P +++G K+D
Sbjct: 67 DYDRLRPLSYPQTDVFILCFSVVSPVSFDNVAS---KWIPEIRQHCPD-APVILVGTKLD 122
Query: 432 LDNRA 446
L + A
Sbjct: 123 LRDEA 127
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 70.5 bits (165), Expect = 7e-13
Identities = 41/130 (31%), Positives = 68/130 (52%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +WDTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ L Y D ++ F + P +F E+ R ++ + S P N P +++G K D
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHCP-NTPIILVGTKAD 118
Query: 432 LDNRAVSVKR 461
L +V+R
Sbjct: 119 LREDRDTVER 128
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 70.5 bits (165), Expect = 7e-13
Identities = 38/125 (30%), Positives = 68/125 (54%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT ++ + F QY T+ D + ++ +D +V + +WDTAGQE
Sbjct: 8 IKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV-FDNYSAQMSLDGNVVNLGLWDTAGQE 66
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ L Y D +L F V +P +F ++ S +++ + PD P +++G K+D
Sbjct: 67 DYDRLRPLSYPQTDVFILCFSVVSPVSFDNVAS---KWIPEIRQHCPD-APVILVGTKLD 122
Query: 432 LDNRA 446
L + A
Sbjct: 123 LRDEA 127
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 70.5 bits (165), Expect = 7e-13
Identities = 41/130 (31%), Positives = 68/130 (52%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +WDTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ L Y D ++ F + P +F E+ R ++ + S P N P +++G K D
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHCP-NTPIILVGTKAD 118
Query: 432 LDNRAVSVKR 461
L +V+R
Sbjct: 119 LREDRDTVER 128
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 70.5 bits (165), Expect = 7e-13
Identities = 41/130 (31%), Positives = 68/130 (52%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +WDTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ L Y D ++ F + P +F E+ R ++ + S P N P +++G K D
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHCP-NTPIILVGTKAD 118
Query: 432 LDNRAVSVKR 461
L +V+R
Sbjct: 119 LREDRDTVER 128
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 70.5 bits (165), Expect = 7e-13
Identities = 41/130 (31%), Positives = 68/130 (52%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +WDTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ L Y D ++ F + P +F E+ R ++ + S P N P +++G K D
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHCP-NTPIILVGTKAD 118
Query: 432 LDNRAVSVKR 461
L +V+R
Sbjct: 119 LREDRDTVER 128
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 70.5 bits (165), Expect = 7e-13
Identities = 41/130 (31%), Positives = 68/130 (52%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +WDTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ L Y D ++ F + P +F E+ R ++ + S P N P +++G K D
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHCP-NTPIILVGTKAD 118
Query: 432 LDNRAVSVKR 461
L +V+R
Sbjct: 119 LREDRDTVER 128
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 69.7 bits (163), Expect = 1e-12
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K++I+GD GKT L+ F +F + Y T+ +++ ++ VD + V + +WDTAGQE
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ L Y D ++ F + +P++ +++ E W E + P N P +++GNK D
Sbjct: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VRHFCP----NVPIILVGNKRD 120
Query: 432 LDNRAVSVK 458
L + +V+
Sbjct: 121 LRSDPQTVR 129
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 69.7 bits (163), Expect = 1e-12
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K++I+GD GKT L+ F +F + Y T+ +++ ++ VD + V + +WDTAGQE
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ L Y D ++ F + +P++ +++ E W E + P N P +++GNK D
Sbjct: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VRHFCP----NVPIILVGNKRD 120
Query: 432 LDNRAVSVK 458
L + +V+
Sbjct: 121 LRSDPQTVR 129
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 68.1 bits (159), Expect = 4e-12
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 242
+++ LG+ VGKTSL+ +F+ F N Y+ATIG DFL+K + ++DR V +Q+WDTA
Sbjct: 12 ELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWDTA 67
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 67.3 bits (157), Expect = 6e-12
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + KF ++Y T+ D V++ T+ ++DTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKV 428
+ L Y D ++ F V AP +F+++ E W E S PF+++G +V
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCS-----KTPFLLVGTQV 117
Query: 429 DL 434
DL
Sbjct: 118 DL 119
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 67.3 bits (157), Expect = 6e-12
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + KF ++Y T+ D V++ T+ ++DTAGQE
Sbjct: 1 MKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 59
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKV 428
+ L Y D ++ F V AP +F+++ E W E S PF+++G +V
Sbjct: 60 DYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCS-----KTPFLLVGTQV 114
Query: 429 DL 434
DL
Sbjct: 115 DL 116
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 66.9 bits (156), Expect = 8e-12
Identities = 37/130 (28%), Positives = 67/130 (51%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +WDTAGQ+
Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQD 62
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ + D ++ F + P +F E+ R ++ + S P N P +++G K D
Sbjct: 63 DYDQFRHLSFPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHCP-NTPIILVGTKAD 118
Query: 432 LDNRAVSVKR 461
L +++R
Sbjct: 119 LREDRDTIER 128
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 66.9 bits (156), Expect = 8e-12
Identities = 37/130 (28%), Positives = 67/130 (51%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +WDTAGQ+
Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQD 62
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ + D ++ F + P +F E+ R ++ + S P N P +++G K D
Sbjct: 63 DYDQFRHLSFPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHCP-NTPIILVGTKAD 118
Query: 432 LDNRAVSVKR 461
L +++R
Sbjct: 119 LREDRDTIER 128
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 66.5 bits (155), Expect = 1e-11
Identities = 41/150 (27%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
++++LG + VGKT+++ +++ +FS++YK TI D ++E + + + I DT
Sbjct: 19 RLVVLGSAKVGKTNIIRRYLYNEFSSKYKETI-EDLHSREFRIQGVPLPLDILDT--NFN 75
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
F + A +LVF V +FK + E + S D + P V++GNK D+
Sbjct: 76 FPDMRRLSIASASAFLLVFSVDDVTSFKEMSDIWQEICSRRS--DLNELPIVVVGNKCDV 133
Query: 435 DNRAVSVKRGQQWC-QSKNDIPYFETSAKE 521
+N+ + + + + + +D+ Y E SAK+
Sbjct: 134 ENKKIYEETAKAFTNRLSSDVRYIEVSAKD 163
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
L K++++GD GVGKT ++ +F N F ++ TIG DF K ++VD + V +QIWDTAG+
Sbjct: 10 LFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTAGE 69
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
L K II+GD+GVGK+ L+ QF +K+F + TIG +F + V +D + + +Q+WDTAGQ
Sbjct: 6 LFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQ 65
Query: 249 E 251
E
Sbjct: 66 E 66
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 66.1 bits (154), Expect = 1e-11
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + KF ++Y T+ ++ +I + T+ ++DTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTAMIGGEP-YTLGLFDTAGQE 62
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKV 428
+ L Y D ++ F V AP +F+++ E W E S PF+++G +V
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCS-----KTPFLLVGTQV 117
Query: 429 DL 434
DL
Sbjct: 118 DL 119
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 64.5 bits (150), Expect = 4e-11
Identities = 26/69 (37%), Positives = 45/69 (65%)
Frame = +3
Query: 39 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIV 218
+ M+ L K++++GDSGVGK+ L+ +F + ++ Y +TIG DF + + +D + +
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60
Query: 219 TMQIWDTAG 245
+QIWDTAG
Sbjct: 61 KLQIWDTAG 69
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 64.1 bits (149), Expect = 6e-11
Identities = 38/127 (29%), Positives = 69/127 (54%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
LK++++GD+ GKTSL+ + K+F + Y T+ D V +D++ + ++DTAGQ
Sbjct: 5 LKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTV-FDNWAVSVHIDNKNYAVNLFDTAGQG 63
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
++ + Y A+ ++ F + K+LES R ++ + DN P +++G K D
Sbjct: 64 NYEQIRCLSYPHANVFLVCFSMI---DRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKND 120
Query: 432 LDNRAVS 452
L + A S
Sbjct: 121 LVDDADS 127
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 63.7 bits (148), Expect = 8e-11
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 233
K++ LG+ VGKTS++ +F+ F N Y+ATIG DFL+K + ++DR + +QIW
Sbjct: 13 KLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDT 239
L K++I+GDSGVGK+SL+ +F + FS Y TIG DF + + ++ + V +QIWDT
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDT 66
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 61.7 bits (143), Expect = 3e-10
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAG 245
+ K II+GD GVGK+ L++QF KKF TIG +F T+ + V + + +QIWDTAG
Sbjct: 11 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 57.6 bits (133), Expect = 5e-09
Identities = 35/120 (29%), Positives = 62/120 (51%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
LK I +G++ VGKTS++ + + + Y T +F + V+VD + + +Q+ DTAGQ
Sbjct: 10 LKCIFVGNAAVGKTSMIVSYTTNVYPHNYVPTAFDNF-SVVVLVDKKPIRLQLHDTAGQS 68
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
F +L Y AD V+V+ V +S E + + + R+P +++G + D
Sbjct: 69 SFDTLRPLCYTDADVFVIVYSVV---DLQSFEDVSHHWYPEVTKRNPGT-KLILVGTQAD 124
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 57.2 bits (132), Expect = 7e-09
Identities = 37/121 (30%), Positives = 66/121 (54%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+++ ++G GKT+ +N + +F+ T+G F +++ + VT+++WD GQ
Sbjct: 21 MELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGN--VTIKLWDIGGQP 76
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
RF+S+ + RG + +VF V A + K LE+ R+E + D P ++LGNK D
Sbjct: 77 RFRSMWERYCRGVN--AIVFMVDAADEEK-LEASRNELMQLLDKPQLDAIPVLVLGNKKD 133
Query: 432 L 434
L
Sbjct: 134 L 134
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 57.2 bits (132), Expect = 7e-09
Identities = 37/121 (30%), Positives = 66/121 (54%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+++ ++G GKT+ +N + +F+ T+G F +++ + VT+++WD GQ
Sbjct: 21 MELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGN--VTIKLWDIGGQP 76
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
RF+S+ + RG + +VF V A + K LE+ R+E + D P ++LGNK D
Sbjct: 77 RFRSMWERYCRGVN--AIVFMVDAADEEK-LEASRNELMQLLDKPQLDAIPVLVLGNKKD 133
Query: 432 L 434
L
Sbjct: 134 L 134
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 56.8 bits (131), Expect = 9e-09
Identities = 31/91 (34%), Positives = 49/91 (53%)
Frame = +3
Query: 246 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 425
QE+F L +Y C +++FDVTA T+K++ +W + R +N P V+ GNK
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDL-----ARVCENIPIVLCGNK 56
Query: 426 VDLDNRAVSVKRGQQWCQSKNDIPYFETSAK 518
VD+ +R V K K ++ Y++ SAK
Sbjct: 57 VDVKDRKVKAK--TITFHRKKNLQYYDISAK 85
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 55.2 bits (127), Expect = 3e-08
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Frame = +3
Query: 51 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR----IV 218
S+ K KV++LGDSGVGKTS++ + ATIGA F++ +V D R +V
Sbjct: 46 STAPKHKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVV 105
Query: 219 TMQIWDTAGQ 248
+Q+WDTAGQ
Sbjct: 106 RLQMWDTAGQ 115
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 53.6 bits (123), Expect = 8e-08
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +WDTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 252 RFQSL 266
+ L
Sbjct: 63 DYDRL 67
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 9/68 (13%)
Frame = +3
Query: 69 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD---------RIVT 221
L+K + GD GVGKTS ++++ + F+ Q+ +T+G DF K+V+ + + V
Sbjct: 7 LIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQRVL 66
Query: 222 MQIWDTAG 245
+QIWDTAG
Sbjct: 67 LQIWDTAG 74
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 51.2 bits (117), Expect = 4e-07
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
L V ++G +G GK+++ +++ K+F +Y +T+ ++ +E + ++ +W E
Sbjct: 10 LHVALVGMAGSGKSAIAVKYITKRFIGEYDSTLEDNYCRQETVGGQ---SLMVWMMDTVE 66
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ + AD V+V+DVT+ +F+ E + P +++GNK D
Sbjct: 67 NATKDEMRWIAWADVYVVVYDVTSQLSFQYAEGILERISRHEHVLCPREHRTLLVGNKTD 126
Query: 432 LDN-RAVSVKRGQQWCQSKNDIPYFETSA 515
L+ R VS G++ S++ + E SA
Sbjct: 127 LERYRQVSETEGER-LASQHKAQFAECSA 154
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 231 WDTAGQERF-QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 407
WDTAGQER+ QS+ +YR + V V+DVT +F L W E D + P
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSE-VPR 59
Query: 408 VILGNK 425
+++GNK
Sbjct: 60 ILIGNK 65
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 48.4 bits (110), Expect = 3e-06
Identities = 34/125 (27%), Positives = 63/125 (50%)
Frame = +3
Query: 57 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWD 236
R++ + V +LG VGK+++++QF+ KF Y+ T+ + I + R++ +QI D
Sbjct: 18 RRQNKVTVAVLGAERVGKSAMVSQFLWHKFVEDYRPTVEEFNWIEYEIEEGRVLMVQIID 77
Query: 237 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 416
++G F + + AD ++VF A + SLE L R ++ P +++
Sbjct: 78 SSGSRDFIGMKNLYIGTADAFLVVF---AADDASSLEEALST-LSDIHARRGNSVPVLLV 133
Query: 417 GNKVD 431
NK D
Sbjct: 134 ANKTD 138
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 36.7 bits (81), Expect(2) = 7e-06
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKAT--IGADFLTKEVIVDDRIVTMQIWDTAG 245
LK++I GD VGKT L + F +Y AT I + D +V + +WD
Sbjct: 44 LKIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQVANINWNYRATDDVVKVDVWDIVD 103
Query: 246 Q 248
Q
Sbjct: 104 Q 104
Score = 29.9 bits (64), Expect(2) = 7e-06
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 234 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVI 413
DTA RF V Y+G + + VFD+T ++W E++ + + P+ P ++
Sbjct: 132 DTACDARF----VDVYKGTNGVIFVFDIT--------KTWTWEYVQKEIVKVPNKIPVLV 179
Query: 414 LGNKVDL 434
L N+ D+
Sbjct: 180 LANRRDM 186
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 46.8 bits (106), Expect = 9e-06
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Frame = +3
Query: 48 MSSRKKLLLKVIILGDSGVGKTSLMNQFVN----KKFSNQYKATIGADFLT-----KEVI 200
MSS + K+++LGDS VGKTSL + + +TIGA + +
Sbjct: 1 MSSLDESSTKILVLGDSCVGKTSLCHCIAGGGEPPGGGRSFDSTIGATVVMAWHEYRAGT 60
Query: 201 VDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW 353
+ R +++WD G + F+ GA +LV D+T + ++L +W
Sbjct: 61 PEQRTELLELWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRSEENLATW 111
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/94 (27%), Positives = 51/94 (54%)
Frame = +3
Query: 33 KLLCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR 212
K+L K +R++ + +++ILG GKT+LM +F+++ ++ + T+G D T V +
Sbjct: 5 KILRKQRAREREM-RILILGLDNAGKTTLMKKFLDEP-TDTIEPTLGFDIKT----VHFK 58
Query: 213 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFD 314
+ +WD GQ+ +S ++ D + V D
Sbjct: 59 DFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVD 92
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 43.6 bits (98), Expect = 9e-05
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
++++++GD G GKTSL+ + ++ + + + +V ++ VT I D + +E
Sbjct: 10 VRIVLIGDEGCGKTSLVMSLLEDEWVDAVPRRLDRVLIPADVTPEN--VTTSIVDLSIKE 67
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDPDNFPFVILGNKV 428
++ V+ R A+ +V+ VT +T +++ W LI+ S + P +++GNK
Sbjct: 68 EDENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLP--LIRQSFGEYHETPVILVGNKS 125
Query: 429 D 431
D
Sbjct: 126 D 126
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +3
Query: 63 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 203
K L KV+++ ++GVGKT L+ +F F ATIG DF+ K V V
Sbjct: 5 KYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKV 51
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 41.9 bits (94), Expect = 3e-04
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Frame = +3
Query: 60 KKLLLKVIILGDSGVGKTSLMNQFVN---KKFS--NQYKATIGADFLTKEVIVDDRIVTM 224
KK V+I+G GKT+ + Q + K + N K T T V +++ +
Sbjct: 14 KKKDYYVVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITATVGLNTGNVELNN--TCL 71
Query: 225 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFP 404
WD GQE + L +Y A+ + V D T + F + S E + + N P
Sbjct: 72 HFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQ---NIP 128
Query: 405 FVILGNKVDLDNRAVSVK 458
++ NK +++ A + +
Sbjct: 129 VLVAVNKSEMEGAAAAAE 146
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/127 (23%), Positives = 52/127 (40%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
+++++LG GKT+++ Q ++ + T G + T + D + + +WD GQ
Sbjct: 18 IRILLLGLDNAGKTTILKQLSSEDVQH-VTPTKGFNVKTVAAMGD---IRLNVWDIGGQR 73
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ +Y D + V D F + E L + R P +I NK D
Sbjct: 74 SIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLR---KVPVLIFANKQD 130
Query: 432 LDNRAVS 452
L A S
Sbjct: 131 LVTAASS 137
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 41.1 bits (92), Expect = 5e-04
Identities = 31/122 (25%), Positives = 61/122 (50%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
+ ++LG G GKT+++ + + N TIG + T V + +T+ +WD GQ++
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNETVNTIP-TIGFNVET----VTFQKITLTVWDVGGQKK 73
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
++L ++ + LVF V + + + E+ + F + A P D+ ++ NK D+
Sbjct: 74 IRALWKYYF--PNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSH-LLVFANKQDM 130
Query: 435 DN 440
N
Sbjct: 131 PN 132
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 40.3 bits (90), Expect = 8e-04
Identities = 32/120 (26%), Positives = 57/120 (47%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K+I++G GKT+++ +V K + K TIG++ +EV R + IWD GQE
Sbjct: 19 KIIVVGLDNAGKTTILYNYVTKD-QVETKPTIGSN--VEEVSY--RNLDFVIWDIGGQES 73
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
+ +Y D ++V D + +T + + +++ D ++L NK DL
Sbjct: 74 LRKSWSTYYVQTDVVIVVID--SSDTTR-IPIMKEQLHNMLQHEDLARAHILVLANKQDL 130
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 38.7 bits (86), Expect = 0.002
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKF-SNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
+ ++++G GKT+++NQ + S Q T+G +T + ++ +D AGQ
Sbjct: 18 VNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVG-HVVTN---FSTQNLSFHAFDMAGQ 73
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD--PDNFPFVILGN 422
+++S +++ + + V D + +E +DE ++ +D P VIL N
Sbjct: 74 MKYRSTWESYFHSSQGVIFVLD---SSDRLRMELLKDELMMVMEHKDVVSRGIPIVILAN 130
Query: 423 KVDL 434
K+D+
Sbjct: 131 KMDI 134
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 38.7 bits (86), Expect = 0.002
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K+ ++GD+G GK+SL++Q + ++ N + AD E+ + V++ I G E
Sbjct: 239 KIYVVGDTGTGKSSLISQLITSEYKNAF-----AD----EIQDYENTVSICI---GGVE- 285
Query: 255 FQSLGVAFYRG--ADCCVLVFDVTA---PNTFKSLESWRDEFLIQASPRD---PDNFPFV 410
+ F+ +D C L ++ A + S SW+ + RD N P +
Sbjct: 286 ---CDLVFFESDMSDPCWLTNEIHAFLVVYSIDSKSSWKQAMVALEMIRDRPGTRNLPTL 342
Query: 411 ILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETS 512
+ GNK+DL+ + K+ + ++ +FE S
Sbjct: 343 VAGNKIDLERKRTVTKQEVRAAKAAMGFEHFEIS 376
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 36.7 bits (81), Expect = 0.010
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Frame = +3
Query: 48 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR-IVTM 224
MSS++K+LL +G SG GKTS M + + + + +G + V + +
Sbjct: 1 MSSKRKVLL----MGKSGSGKTS-MRSIIFANYIARDCSRLGPTIEVEHAHVKFLGNMVL 55
Query: 225 QIWDTAGQERFQ-----SLGVAFYRGADCCVLVFDVTAPNTFKSLESWRD--EFLIQASP 383
+WD GQE F S ++ + VFDV + K L ++ E L+Q SP
Sbjct: 56 HLWDCGGQESFMENFLVSQKDQIFKNVQVLIYVFDVESREFEKDLRYYQSCLEALLQNSP 115
Query: 384 RDPDNFPFVILGNKVDLDNRAVSVKR 461
+ F + + ++ D R + KR
Sbjct: 116 -NAQVFCLIHKMDLIEEDKREETFKR 140
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 36.3 bits (80), Expect = 0.013
Identities = 25/94 (26%), Positives = 42/94 (44%)
Frame = +3
Query: 33 KLLCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR 212
K L K+ +K+L ++++LG GKT+++ K Q TI E +
Sbjct: 3 KFLSKIFGKKEL--RILMLGLDAAGKTTILY----KLKLGQSVTTIPTVGFNVETVTYKN 56
Query: 213 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFD 314
I +WD GQ++ + L +Y G + V D
Sbjct: 57 I-KFNVWDVGGQDKIRPLWRHYYTGTQALIFVMD 89
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 35.1 bits (77), Expect = 0.031
Identities = 26/126 (20%), Positives = 58/126 (46%)
Frame = +3
Query: 63 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 242
K ++++++G GKT+++ + + TIG + T V+ + ++ +WD
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVET----VEYKNISFTVWDVG 69
Query: 243 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN 422
GQ++ + L +++ + V D N + +E R+E + + + ++ N
Sbjct: 70 GQDKIRPLWRHYFQNTQGLIFVVD---SNDKERIEESREELHKMLNEDELRDATLLVFAN 126
Query: 423 KVDLDN 440
K DL N
Sbjct: 127 KQDLPN 132
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 35.1 bits (77), Expect = 0.031
Identities = 26/126 (20%), Positives = 58/126 (46%)
Frame = +3
Query: 63 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 242
K ++++++G GKT+++ + + TIG + T V+ + ++ +WD
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVET----VEYKNISFTVWDVG 69
Query: 243 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN 422
GQ++ + L +++ + V D N + +E R+E + + + ++ N
Sbjct: 70 GQDKIRPLWRHYFQNTQGLIFVVD---SNDKERIEESREELHKMLNEDELRDATLLVFAN 126
Query: 423 KVDLDN 440
K DL N
Sbjct: 127 KQDLPN 132
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 33.5 bits (73), Expect = 0.094
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 81 IILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 182
+I+G+SGVGK+SLM +FV+ + +IG F
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPF 34
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 32.7 bits (71), Expect = 0.16
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
++++ILG G GKT+++ + + TIG F ++ V+ + + Q+WD GQ
Sbjct: 17 MRILILGLDGAGKTTILYRLQVGEVVTTI-PTIG--FNVEQ--VEYKNLKFQVWDLGGQT 71
Query: 252 RFQSLGVAFYRGADCCVLVFD 314
+ +Y D + V D
Sbjct: 72 SIRPYWRCYYANTDAIIYVVD 92
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 31.5 bits (68), Expect = 0.38
Identities = 23/121 (19%), Positives = 56/121 (46%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 251
++++++G GKT+++ + + TIG + T V+ + ++ +WD GQ+
Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVET----VEYKNISFTVWDVGGQD 72
Query: 252 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ + L +++ + V D N + + R+E + + + + ++ NK D
Sbjct: 73 KIRPLWRHYFQNTQGLIFVVD---SNDRERVGEAREELMRMLAEDELRDAVLLVFANKQD 129
Query: 432 L 434
L
Sbjct: 130 L 130
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 30.3 bits (65), Expect = 0.87
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQY--KATIGADFLTKEVIVDDRIVTMQIWDTAGQ 248
+V++LG G GKTS++ + + TIG + T + + + WD G
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIET----IHYKNYRLNFWDVGGL 426
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTF 335
+ + L +Y A V D A F
Sbjct: 427 PKLRHLWKHYYSNAQAIFYVIDGYAVERF 455
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 84 ILGDSGVGKTSLMNQFVNKKFSN 152
ILG SG GKT+LMN ++ +N
Sbjct: 25 ILGSSGAGKTTLMNVLTSRNLTN 47
>Z83129-6|CAB63324.1| 101|Caenorhabditis elegans Hypothetical
protein W06G6.10 protein.
Length = 101
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 13 YFSSLCKNCCAKCLHG 60
+F+ LC NCCA C+ G
Sbjct: 82 FFAELCCNCCAGCVQG 97
>Z83114-1|CAB63234.1| 549|Caenorhabditis elegans Hypothetical
protein K09B11.2 protein.
Length = 549
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 78 VIILGDSGVGKTSLMNQFVNKKFSNQYK 161
++ +G G GK++LM VN+ SN Y+
Sbjct: 186 ILPIGHKGAGKSNLMRSLVNRCLSNGYE 213
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = -2
Query: 223 IVTILSSTITSFVRKSAPIVALYWLENFLLTN*F--IRDVFPTP-LSPRIITFS-RSFFR 56
++ +L I+++ R ++ ++ L TN F I DV PTP ++ TF +SF+
Sbjct: 516 VLIVLREMISTY-RDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYL 574
Query: 55 EDILHN 38
EDILHN
Sbjct: 575 EDILHN 580
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 84 ILGDSGVGKTSLMNQFVNKKFSNQYKAT 167
I+G SG GKT+L+N + SN KAT
Sbjct: 97 IIGPSGAGKTTLLNVLTKRNLSN-LKAT 123
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 28.7 bits (61), Expect = 2.7
Identities = 24/119 (20%), Positives = 54/119 (45%)
Frame = +3
Query: 75 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 254
K++ LG GKT+L++ + + + Q+ T+ ++++ + ++ +D G +
Sbjct: 23 KLVFLGLDNAGKTTLLHMLKDDRIA-QHVPTLHPT--SEQMSLGG--ISFTTYDLGGHAQ 77
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 431
+ + ++ D V + DV + ++ R E + P +ILGNK+D
Sbjct: 78 ARRVWKDYFPAVDAVVFLIDVADA---ERMQESRVELESLLQDEQIASVPVLILGNKID 133
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 396 NFPFVILGNKVDLD-NRAVSVKRGQQWCQSKNDIPYFETSAKE 521
N P V++G+K D+ R V+ GQQ ++ IP+ E S+K+
Sbjct: 321 NQPIVLVGSKKDMRVKRVVTSFEGQQLARTLG-IPFLEVSSKQ 362
>U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 2 protein.
Length = 699
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 264 LGVAFYRGADCCVLVFDVTAPNTF 335
L A Y G +CC+ FD T NT+
Sbjct: 136 LDEAIYCGGNCCIWGFDKTGANTY 159
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 78 VIILGDSGVGKTSLM 122
++I GDSG+GKTSLM
Sbjct: 410 LLITGDSGIGKTSLM 424
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 78 VIILGDSGVGKTSLM 122
++I GDSG+GKTSLM
Sbjct: 438 LLITGDSGIGKTSLM 452
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 78 VIILGDSGVGKTSLM 122
++I GDSG+GKTSLM
Sbjct: 410 LLITGDSGIGKTSLM 424
>Z50874-8|CAA90768.1| 197|Caenorhabditis elegans Hypothetical
protein R10E4.7 protein.
Length = 197
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 111 TSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGA 290
T+ NQ++ + + + T +VI D + IWDT Q S+ ++++R
Sbjct: 69 TTNSNQWIPRLIEEKSVDGVAMRNFTDDVISLDNEIFTMIWDTREQRITHSI-ISYHRIN 127
Query: 291 DCCVL 305
DC ++
Sbjct: 128 DCDIM 132
>Z82272-8|CAB05223.1| 337|Caenorhabditis elegans Hypothetical
protein F55G11.1 protein.
Length = 337
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +3
Query: 9 IVFFIIV*KLLCKMSSRKKLLLKVIILGDS-------GVGKTSLMNQFVNKKFSNQYKAT 167
++FFII+ K L SSR + + +V+ +G + G S+++ F+ + QY
Sbjct: 116 LMFFIILEKFLWTCSSRTRQIFRVVTIGKNKYWLALIGCIGYSVLSAFIQSRSLLQYGEV 175
Query: 168 IGADFLTKEVIVD 206
D L + V D
Sbjct: 176 PFCDLLFRPVGAD 188
>Z82260-13|CAB05143.1| 337|Caenorhabditis elegans Hypothetical
protein F55G11.1 protein.
Length = 337
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +3
Query: 9 IVFFIIV*KLLCKMSSRKKLLLKVIILGDS-------GVGKTSLMNQFVNKKFSNQYKAT 167
++FFII+ K L SSR + + +V+ +G + G S+++ F+ + QY
Sbjct: 116 LMFFIILEKFLWTCSSRTRQIFRVVTIGKNKYWLALIGCIGYSVLSAFIQSRSLLQYGEV 175
Query: 168 IGADFLTKEVIVD 206
D L + V D
Sbjct: 176 PFCDLLFRPVGAD 188
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical protein
C48B4.4c protein.
Length = 1704
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 84 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 203
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1409 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1448
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical protein
C48B4.4b protein.
Length = 1691
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 84 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 203
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1396 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1435
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical protein
C48B4.4a protein.
Length = 1689
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 84 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 203
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1394 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1433
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 84 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 203
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1409 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1448
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 27.1 bits (57), Expect = 8.1
Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +3
Query: 78 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV-IVDDRIVTMQIWDTAGQER 254
V I+G GKT+L++ N + + I V + R VT DT G
Sbjct: 159 VTIMGHVDHGKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFL--DTPGHAA 216
Query: 255 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 434
F S+ +GAD VLV V A + K + +F A N V+ NK+D
Sbjct: 217 FASMRARGAKGADIVVLV--VAADDGVKEQTAQSIKFAKDA------NVQLVVAVNKIDK 268
Query: 435 DN 440
N
Sbjct: 269 PN 270
>Z49909-8|CAA90111.1| 204|Caenorhabditis elegans Hypothetical
protein C14A4.7a protein.
Length = 204
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 249 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 395
E + GV Y GA C L+F V FKSL R + P + D
Sbjct: 148 ESYSGDGV-LYVGAFFCFLIFGVRIACIFKSLPQLRQDVHFPGRPSNAD 195
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 300 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN-RAVSVKRGQQWC 476
+L++ VT +F L E + + P +++GNK D ++ R VS GQ+
Sbjct: 13 ILIYSVTNKQSFAELVPII-EMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSGQK-V 70
Query: 477 QSKNDIPYFETSAK 518
+ + + ETSAK
Sbjct: 71 ATNMECGFIETSAK 84
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 72 LKVIILGDSGVGKTSLMNQFVNK 140
L +I+ G++G GKTSLM + K
Sbjct: 458 LPIILQGENGCGKTSLMAKIATK 480
>AF000263-17|AAG00013.1| 179|Caenorhabditis elegans Hypothetical
protein T08B2.3 protein.
Length = 179
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 45 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 170
K++S K +LLK++ +G S +NQFV KFSN + ++
Sbjct: 133 KLTSYKNILLKLLCRLLTGSSHFSNLNQFV--KFSNSIERSM 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,976,539
Number of Sequences: 27780
Number of extensions: 274085
Number of successful extensions: 1075
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -