Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325D02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.47 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.62 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         22   4.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   5.8  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   5.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 274 KTSTSQRYHHIQTNLHCTYST 336
           K  T QR+HH+Q + H   ST
Sbjct: 134 KQETLQRHHHLQNHHHHLQST 154


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 379 HTHNWYTIERTRGDTHSAHHTRPQS 453
           H H  +T+  T G  H  HH + QS
Sbjct: 336 HQHGNHTMGPTMGPPHHHHHHQTQS 360


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 439 CDARCVCRRASVRLCTSCVCEC 374
           C  RC+ +R     C + VC C
Sbjct: 81  CAIRCLAQRRKGGSCRNGVCIC 102


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 316 N*SEYGDIVEMWMFYVP 266
           N S++  +V+ WM Y+P
Sbjct: 319 NSSDFKKLVDNWMTYMP 335


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 129 SKYNNLKVYTSYNVLDGIRIKI 194
           + YNN K+Y + N ++ I + +
Sbjct: 319 NNYNNKKLYYNINYIEQIPVPV 340


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 316 N*SEYGDIVEMWMFYVP 266
           N S++  +++ WM Y+P
Sbjct: 319 NSSDFKKLIDNWMTYMP 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,272
Number of Sequences: 438
Number of extensions: 2892
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)