Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325C11f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0333 + 2404459-2404857,2404917-2405009,2405428-2405522,240... 33 0.11
05_03_0163 + 9070781-9071320 31 0.74
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 30 1.3
01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547 30 1.3
09_04_0747 + 19892090-19893304,19893471-19893602,19894168-198942... 29 2.3
05_01_0238 - 1783742-1783780,1783838-1783936,1784033-1784155 29 2.3
04_04_1050 + 30419673-30419789,30419882-30419977,30420180-304202... 29 2.3
07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521 29 3.0
04_04_0809 - 28236216-28236679,28236776-28236899,28237049-282371... 29 3.0
04_01_0450 - 5840015-5840055,5840635-5840977,5841326-5841537,584... 29 3.0
06_03_1001 + 26817231-26818246,26818341-26818525,26818614-268189... 28 4.0
02_02_0316 - 8878540-8878605,8880040-8880732,8881270-8881758 28 4.0
12_01_1041 - 10711362-10711428,10711571-10712262,10712622-107127... 28 5.2
11_01_0487 - 3763233-3763733,3763827-3764279,3765270-3765392,376... 28 5.2
10_08_1040 + 22503641-22503681,22503838-22504299,22506952-225073... 28 5.2
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 28 5.2
04_04_0151 + 23134467-23134627,23134657-23134803,23135413-231355... 28 5.2
11_04_0475 - 18176578-18177252,18180101-18180664 27 6.9
09_06_0085 - 20760072-20761085 27 6.9
07_03_0332 + 16880184-16881017,16881334-16881462,16882685-168827... 27 6.9
07_01_0594 + 4428440-4429837 27 6.9
02_05_0622 + 30437533-30437577,30437694-30438177,30438301-304383... 27 6.9
10_08_0186 - 15582925-15584334 27 9.1
09_02_0252 - 6315834-6315959,6316074-6317018 27 9.1
07_01_0245 - 1803170-1803887,1803971-1804641 27 9.1
05_04_0251 - 19381397-19381904,19382003-19382157,19382897-193830... 27 9.1
02_05_1042 + 33718988-33720112,33720709-33721305,33721862-337222... 27 9.1
>06_01_0333 +
2404459-2404857,2404917-2405009,2405428-2405522,
2406146-2406219,2406307-2406395,2406745-2406858
Length = 287
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -2
Query: 112 PSPPLLLRFVLPRCRPASSPDLVHSRRPAAALT 14
PSPPL L LP P P L+ S RPAAALT
Sbjct: 4 PSPPLFLS--LPSPPPPPLPHLLPSHRPAAALT 34
>05_03_0163 + 9070781-9071320
Length = 179
Score = 30.7 bits (66), Expect = 0.74
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 9 GHVRAAAGLREWTRSGEDAGRHRGRTKRS-NNGGDGQTARLALPRVRIPDPG 161
G R A G W++ E G GR++R+ GG G +R R R P+PG
Sbjct: 12 GQSRGAGG---WSQRAEGWGGGGGRSQRAEGGGGGGGRSRRGTGRGRWPEPG 60
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 3 CFGHVRAAAGLREWTRSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIPDPGNLLV 173
C A+G EW+ +G +G R + GGDG LALPR+++PD + LV
Sbjct: 2794 CLDGFEPASG-GEWS-AGRFSGGCRRKEAPPCGGGDGF---LALPRMKVPDKFSTLV 2845
>01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547
Length = 388
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +3
Query: 24 AAGLREWTRSGEDAGRHRGRTKRSNNGGDGQTARLALPRV 143
AA LR S DAG G R GG G A A+PR+
Sbjct: 30 AAMLRRMVVSDTDAGGGGGEAGRVRGGGGGGAALFAVPRL 69
>09_04_0747 +
19892090-19893304,19893471-19893602,19894168-19894215,
19894697-19894766,19894936-19894963,19896021-19896519
Length = 663
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -3
Query: 201 WHHGTVKSSVPEDFRGRVSVHEAAQDERSAHLPRYYFV 88
WHH + + ++ GR+ + AA ++ + + PR Y++
Sbjct: 238 WHHAVMSFDLNKESFGRIQLPTAALEDSAFYGPRRYWI 275
>05_01_0238 - 1783742-1783780,1783838-1783936,1784033-1784155
Length = 86
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 112 PSPPLLLRFVLPRCRPASSPDLVHSRRPAAAL 17
PSPP LLR +LP +SS L RRP +L
Sbjct: 4 PSPPCLLRVLLP-VASSSSRGLRRRRRPTTSL 34
>04_04_1050 +
30419673-30419789,30419882-30419977,30420180-30420264,
30420352-30420386,30420479-30420544,30420646-30420686,
30420818-30420933,30421101-30421207,30421354-30421491,
30421610-30421744,30421888-30421998
Length = 348
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 242 RRTFSLASYNVLLYGTMGPLSPLYQKISGVGYPYTRQR 129
R T S Y V L T+ LS L QKI+ Y Y +Q+
Sbjct: 303 RETVSRTDYEVDLITTLTKLSSLGQKINYEAYTYPKQK 340
>07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521
Length = 191
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2
Query: 169 RRFPGSGIRTRGSARRAVCPSPPLLLRFVLPRCRPASSPD 50
RR PGSG +A R + P P+L R R P+S PD
Sbjct: 104 RRRPGSG--AAAAATRPLLPILPMLARGDRERALPSSRPD 141
>04_04_0809 -
28236216-28236679,28236776-28236899,28237049-28237191,
28237697-28237832,28238413-28238888,28238940-28239024
Length = 475
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 18 RAAAGLREWTRSGEDAGRHRGRTKRSNNGGDGQTARLALPRVR 146
R A R TRSG H + R +G DG + PRVR
Sbjct: 433 REDASPRVPTRSGGHGHHHHHHSSRPRSGSDGARSGYPSPRVR 475
>04_01_0450 -
5840015-5840055,5840635-5840977,5841326-5841537,
5842381-5842477
Length = 230
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/22 (68%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 48 RSGE-DAGRHRGRTKRSNNGGD 110
RSGE DAGR GR RS GGD
Sbjct: 3 RSGEGDAGRGDGRRLRSGQGGD 24
>06_03_1001 +
26817231-26818246,26818341-26818525,26818614-26818917,
26819956-26820041,26820141-26820298,26820420-26820496,
26820586-26820652
Length = 630
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = -1
Query: 200 GTMGPLSPLYQKISGVGYPYTRQRKTSGLPISPVITSFCSPAMPTGVLT 54
G P + L K G PY RK G P + P PT V+T
Sbjct: 422 GLKSPAAGLAAKFPVSGSPYVAPRKKGGGADVPGLAEAAHPMPPTSVMT 470
>02_02_0316 - 8878540-8878605,8880040-8880732,8881270-8881758
Length = 415
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 188 PLSPLYQKISGVGYPYTRQRKTSGLPISPVITSFCSPAMP-TGVLTGSCPLAQASSSPNV 12
P+SP + + G P + + T G P + + + P T SC +A S SP +
Sbjct: 219 PISPRFAAAAAAGVPISPRTPTPGSPYNKHAAAAATARPPHPAAATSSCSVAY-SMSPAM 277
Query: 11 TET 3
T T
Sbjct: 278 TPT 280
>12_01_1041 -
10711362-10711428,10711571-10712262,10712622-10712777,
10712885-10713957,10714422-10714524,10714694-10714876,
10715007-10715099,10715379-10715564,10716530-10716793
Length = 938
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 60 DAGRHRGRTKRSNNGGDGQTARLA-LPRVRIPDPGNLLVQRT*RSHGAIQQYIVR 221
+AG GR+ S +GG G+ LA + R P P ++ + T + A ++ ++R
Sbjct: 5 EAGGPVGRSPPSGSGGGGRRKTLAEVMATRTPRPASIRPEATRAAEAAAREVLLR 59
>11_01_0487 -
3763233-3763733,3763827-3764279,3765270-3765392,
3765822-3766122,3766283-3766644,3767117-3767713,
3768323-3769447
Length = 1153
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 85 QNEVITGEMGRPLVLRCLVYGYPTPEI 165
Q E+G P+VLRC Y P E+
Sbjct: 886 QKRAFRAELGEPVVLRCQPYKIPLAEL 912
>10_08_1040 +
22503641-22503681,22503838-22504299,22506952-22507361,
22507484-22507640,22507718-22507937,22508053-22508106,
22508193-22508272,22508359-22508636,22509193-22509515,
22509590-22509853,22510453-22510860
Length = 898
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 36 REWTRSGEDAGRHRGR-TKRSNNGGDG 113
R W R G GR RGR T R GGDG
Sbjct: 133 RRWGRRGA-VGRRRGRRTARQRPGGDG 158
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 27.9 bits (59), Expect = 5.2
Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Frame = +3
Query: 33 LREWTRSGEDAGRHRGRTKRS----NNGGDGQTARLALPRVRIP-DPGNLLVQRT*RSHG 197
LR R + RH R R+ GG G R A R R P PG R G
Sbjct: 270 LRAALRCAQLPERHFARAVRAALERGEGGAGADRRDARGRRRAPRQPGVRGQDRV--DAG 327
Query: 198 AIQQYIVRSQRKRSSNKTTDRRGARGIRVSSIQRR 302
+ VR +R R + DRR ARG+ ++ R
Sbjct: 328 ERRPERVRQRRHREVGRRLDRRLARGVAQVGLRTR 362
>04_04_0151 +
23134467-23134627,23134657-23134803,23135413-23135512,
23135554-23135638,23135767-23136419
Length = 381
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 127 RRAVCPSPPLLLRFVLPRCRPASSPDLV 44
RR+ P PPL LR +L R RP +P+LV
Sbjct: 261 RRSSSPVPPLSLRRILRRPRP--TPELV 286
>11_04_0475 - 18176578-18177252,18180101-18180664
Length = 412
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -2
Query: 73 CRPASSPDLVHSRRPAAALT 14
C A PDLV R PAAALT
Sbjct: 128 CAAAMRPDLVGGRWPAAALT 147
>09_06_0085 - 20760072-20761085
Length = 337
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 298 GEGSPATLLMEVRA-YKQDDTPSDNKYLVSRPGE 396
GE + +++EVR + DD P +YLV + GE
Sbjct: 152 GETASEVVILEVRTEFGHDDPPEFGRYLVEQLGE 185
>07_03_0332 +
16880184-16881017,16881334-16881462,16882685-16882750,
16883159-16883224,16884419-16884457,16884858-16885028
Length = 434
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 48 RSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIPDPGNLLVQ 176
+ E+A G TK+S + T+ L +P+V++ D L Q
Sbjct: 294 KRSEEAAGSEGSTKKSKHEATSPTSSLKVPKVKLGDKITALQQ 336
>07_01_0594 + 4428440-4429837
Length = 465
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -2
Query: 361 RAYRLVCTPEPPSVTWPGFLLRCMLDTRIPRAPRRSVVLLE-ERFLWLRTMYCCMAPWD 188
R + P S+ W + L +DT A ++VL+ ER W + MY C WD
Sbjct: 320 RVDKFADAPRRESIRWARWWLA--VDTASSSAGGGALVLVATERRWWKQKMYMCAFRWD 376
>02_05_0622 +
30437533-30437577,30437694-30438177,30438301-30438354,
30438565-30438789,30438891-30438943,30439591-30439714,
30439823-30440077,30440171-30440517,30440661-30441266,
30441504-30441546,30441624-30441757
Length = 789
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 222 FVQCTAVWHHGTVKSSVPEDFRGRVSVH 139
F+ VWH+GT+K DF+ +VSV+
Sbjct: 479 FMIVMCVWHYGTIK-KYEFDFQNKVSVN 505
>10_08_0186 - 15582925-15584334
Length = 469
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 55 VRTPVGIAG-EQNEVITGEMGRPLVLRCLVYGYPTPEIFWYRGLNGPMVPYSSTLYEARE 231
+ GI+G EQN V+ R ++ G+P + ++ GP + Y AR+
Sbjct: 133 IEEATGISGVEQNSVVVATQVRDSLVAD-EGGFPAELLRYFDSYGGPELLYELRFLNARQ 191
Query: 232 NVLLIRQLIDEAL 270
R ID L
Sbjct: 192 RADAARHAIDRRL 204
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -1
Query: 191 GPLSPLYQKISGVGYPYTRQRKTSGLPISPVITSFCS-PAMPTGVLTGSCPLAQASSS 21
G +P + G P R TSG + T+ P MPT SCP + ++++
Sbjct: 102 GGANPRASAAAAAGTPRALHRSTSGPAAAAASTARRGYPRMPTPARAASCPSSSSAAA 159
>07_01_0245 - 1803170-1803887,1803971-1804641
Length = 462
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 182 SPLYQKISGVGYPYTRQRKTSGLPISPVITSFCSPAMPTGVLTGSCPLAQA 30
SP Y KI PY LP SP ++ +PA TG L + L++A
Sbjct: 36 SPCYCKIRLNKLPYQTADAPLLLPPSPEASAAPAPAPATGALAAAFHLSKA 86
>05_04_0251 -
19381397-19381904,19382003-19382157,19382897-19383012,
19383185-19383286,19384321-19384438,19384622-19384735
Length = 370
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 130 ARRAVCPSPPLLLRFVLPRCRPASSPDLVHSRRPAAALT 14
AR VCPS + R RP++ DL P A+T
Sbjct: 215 ARHVVCPSSNRRVSITFVRVRPSTPVDLSPLPSPTKAMT 253
>02_05_1042 +
33718988-33720112,33720709-33721305,33721862-33722223,
33722383-33722683,33723149-33723271,33723535-33723990,
33724102-33724602
Length = 1154
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 85 QNEVITGEMGRPLVLRCLVYGYPTPEI 165
Q + E+G P+VLRC Y P E+
Sbjct: 887 QKRSLRPELGEPVVLRCQPYKIPLAEL 913
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,149,943
Number of Sequences: 37544
Number of extensions: 353134
Number of successful extensions: 1439
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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