Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325C05f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 326 6e-90
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 326 6e-90
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 326 6e-90
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 326 6e-90
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 326 6e-90
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 326 6e-90
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 325 1e-89
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 324 3e-89
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 316 6e-87
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 287 2e-78
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 233 6e-62
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 193 7e-50
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 6e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 6e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 1e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 7e-46
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 152 1e-37
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 128 2e-30
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 94 6e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 50 1e-06
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.094
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.12
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.7
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 27 6.2
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 6.2
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 6.2
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 6.2
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 6.2
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 6.2
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 8.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 326 bits (801), Expect = 6e-90
Identities = 150/152 (98%), Positives = 152/152 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 424
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 425 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 326 bits (801), Expect = 6e-90
Identities = 150/152 (98%), Positives = 152/152 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 424
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 425 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 326 bits (801), Expect = 6e-90
Identities = 150/152 (98%), Positives = 152/152 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 424
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 425 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 326 bits (801), Expect = 6e-90
Identities = 150/152 (98%), Positives = 152/152 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 424
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 425 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 326 bits (801), Expect = 6e-90
Identities = 150/152 (98%), Positives = 152/152 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 424
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 425 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 326 bits (801), Expect = 6e-90
Identities = 150/152 (98%), Positives = 152/152 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 424
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 425 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 325 bits (799), Expect = 1e-89
Identities = 150/152 (98%), Positives = 152/152 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 424
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 425 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 152
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 324 bits (795), Expect = 3e-89
Identities = 148/152 (97%), Positives = 152/152 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 424
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 425 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 152
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 316 bits (776), Expect = 6e-87
Identities = 145/150 (96%), Positives = 149/150 (99%)
Frame = +2
Query: 71 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 250
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 251 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 430
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 431 IMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
IMFETFNTPAMYV IQAVLSLYASGRTTGI
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGI 151
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 287 bits (705), Expect = 2e-78
Identities = 132/134 (98%), Positives = 134/134 (100%)
Frame = +2
Query: 119 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 298
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 299 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 478
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 479 AVLSLYASGRTTGI 520
AVLSLYASGRTTG+
Sbjct: 125 AVLSLYASGRTTGV 138
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 233 bits (570), Expect = 6e-62
Identities = 107/108 (99%), Positives = 108/108 (100%)
Frame = +2
Query: 197 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 376
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 377 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 108
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 193 bits (470), Expect = 7e-50
Identities = 83/145 (57%), Positives = 113/145 (77%), Gaps = 1/145 (0%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 268
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 269 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 445
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 446 FNTPAMYVAIQAVLSLYASGRTTGI 520
FN PA+Y+ +QAVLSLYA+GRTTG+
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGV 155
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 6e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKI 322
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 6e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKI 322
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 1e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDMEKI 322
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 7e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPIEHGIVTNWDDM 313
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 152 bits (369), Expect = 1e-37
Identities = 75/147 (51%), Positives = 101/147 (68%), Gaps = 3/147 (2%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 262
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 263 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 439
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 440 ETFNTPAMYVAIQAVLSLYASGRTTGI 520
E + ++YVA+QAVL+LYA G TG+
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGV 155
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 128 bits (309), Expect = 2e-30
Identities = 69/159 (43%), Positives = 91/159 (57%), Gaps = 13/159 (8%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 208
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 209 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 385
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 386 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 502
E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 93.9 bits (223), Expect = 6e-20
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 17/166 (10%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 247
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 248 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 382
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 383 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 520
+E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGL 174
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +2
Query: 80 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 259
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 260 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 439
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 440 ETF 448
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +2
Query: 80 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 259
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 260 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 439
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 440 ETF 448
+ F
Sbjct: 116 DYF 118
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 34.7 bits (76), Expect = 0.041
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +1
Query: 172 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 351
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 193 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGA 249
Query: 352 CRPRGTPRPAY*GSPQPQG 408
P G P PA G+P P G
Sbjct: 250 AGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.094
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +1
Query: 172 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 351
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 352 CRPRGTPRPAY*GSPQPQG 408
P G P PA G+P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.12
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -3
Query: 393 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 214
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 213 CPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 70
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 33.1 bits (72), Expect = 0.12
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 2/146 (1%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 262
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 263 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 442
+E + D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 443 TFNTPAMYVAIQAVLSLYASGRTTGI 520
+ + Q L LYA TTG+
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGV 324
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 119 KAGFAGDDAPRAVFPSIVGRPRHQG 193
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 504 PDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 409
P S TAW+ GV N+ N + IFS+L
Sbjct: 286 PYGLSIGTAWIFLLAPGVYNILNQLASIFSML 317
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 144 ASSPAKPALHIPEPLSTTNAATSS 73
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 144 ASSPAKPALHIPEPLSTTNAATSS 73
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 144 ASSPAKPALHIPEPLSTTNAATSS 73
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 144 ASSPAKPALHIPEPLSTTNAATSS 73
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 304 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 194
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 373
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 373
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 438 SKHSTRPPCTSPSKPCSRCTRPVVPPV 518
S S+ P PS+PCS RP P V
Sbjct: 11 SSKSSAPATRRPSRPCSSYDRPSSPSV 37
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 438 SKHSTRPPCTSPSKPCSRCTRPVVPPV 518
S S+ P PS+PCS RP P V
Sbjct: 1390 SSKSSAPATRRPSRPCSSYDRPSSPSV 1416
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,462,151
Number of Sequences: 27780
Number of extensions: 312493
Number of successful extensions: 1229
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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