Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325C04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...    53   1e-07
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical...    31   0.66 
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    30   0.87 
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    30   0.87 
Z68108-2|CAA92135.1|  406|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z92822-7|CAH10786.1|  601|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z83244-9|CAH10804.1|  601|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z83244-1|CAB05827.2|  634|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF145376-1|AAD39815.1|  634|Caenorhabditis elegans LIT-1 protein.      29   2.0  
AF078792-2|AAC26946.1|  512|Caenorhabditis elegans Hypothetical ...    29   2.0  
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 34/62 (54%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
 Frame = -1

Query: 518 LLAS--RLMSPKSMLSRIYRMIKLGLGIDEDEPIQVEEPASGDV-PPLEGDADDASRMEE 348
           LLAS   L  P+S  SRIYRMIKLGL I +DE      P+S      +EG  +DASRMEE
Sbjct: 641 LLASGFSLEEPQSHASRIYRMIKLGLDIGDDEIEDSAVPSSCTAEAKIEGAEEDASRMEE 700

Query: 347 VD 342
           VD
Sbjct: 701 VD 702


>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
           protein Y47D3A.29 protein.
          Length = 1428

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +2

Query: 383 PMAARLQK--QALQPESAHLHQYQDPV*SFYRYGKAWTWGSSSVKPED 520
           P A  +QK  + ++ E+ HL + +D +  F R  + WT GSSS + ED
Sbjct: 255 PTAPAIQKIEETVKMETEHLEEVEDSLAKF-RVIEDWTGGSSSQEDED 301


>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
            C46C2.1b protein.
          Length = 1677

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 332  RDLNQLPPCEMHHQHHPPMAARLQKQALQPES 427
            RD    PP   HHQ HPP    LQ     P++
Sbjct: 1605 RDNQSAPPRHHHHQPHPPHHPHLQNHYHPPQN 1636


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
            C46C2.1a protein.
          Length = 1838

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 332  RDLNQLPPCEMHHQHHPPMAARLQKQALQPES 427
            RD    PP   HHQ HPP    LQ     P++
Sbjct: 1766 RDNQSAPPRHHHHQPHPPHHPHLQNHYHPPQN 1797


>Z68108-2|CAA92135.1|  406|Caenorhabditis elegans Hypothetical
           protein T05A10.3 protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 437 EDEPIQVEEPASGDVPPLEGDADDASRMEEVD*D 336
           ++EP++VEEP    V P EGD   AS  E +  D
Sbjct: 182 DEEPVEVEEPV---VEPTEGDEQMASSSEHITKD 212


>Z92822-7|CAH10786.1|  601|Caenorhabditis elegans Hypothetical
           protein W06F12.1d protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 344 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 442
           QL     HH HH P AA+    A+ P S  + Q
Sbjct: 83  QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 115


>Z83244-9|CAH10804.1|  601|Caenorhabditis elegans Hypothetical
           protein W06F12.1d protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 344 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 442
           QL     HH HH P AA+    A+ P S  + Q
Sbjct: 83  QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 115


>Z83244-1|CAB05827.2|  634|Caenorhabditis elegans Hypothetical
           protein W06F12.1a protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 344 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 442
           QL     HH HH P AA+    A+ P S  + Q
Sbjct: 116 QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 148


>AF145376-1|AAD39815.1|  634|Caenorhabditis elegans LIT-1 protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 344 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 442
           QL     HH HH P AA+    A+ P S  + Q
Sbjct: 116 QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 148


>AF078792-2|AAC26946.1|  512|Caenorhabditis elegans Hypothetical
           protein Y40D12A.2 protein.
          Length = 512

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 263 KSVFGCTPMHKNKPL*HGSYS*SRDLNQLPPCEMHHQHHPPMAARLQKQALQ 418
           K + G +P+ KNK      Y  S D+   P C  H  H P + +   K+AL+
Sbjct: 301 KKIIGESPVLKNKYF----YPPSNDIQGQPDCASHDDHFPYLNSPEVKKALR 348


>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
           protein F54D11.2 protein.
          Length = 1145

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 443 IDEDEPIQVEEPASGDVPPLEGDADDASRMEE 348
           +++DEP    E  S DVP     +D+AS ++E
Sbjct: 115 MNKDEPSTSTEAPSADVPGTSEASDEASEIQE 146


>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
           protein K07E3.1 protein.
          Length = 1061

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 350 PPCEMHHQHHPPMAARLQKQALQPESAHLHQYQDPV 457
           PP +MH+   P MA ++  QA+ P+  H+     PV
Sbjct: 238 PPPQMHYNAQPRMAYQVAYQAV-PQFVHMPVQMAPV 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,685,068
Number of Sequences: 27780
Number of extensions: 239528
Number of successful extensions: 696
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)