Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325B08f
(483 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15313-11|AAK68622.1| 208|Caenorhabditis elegans Hypothetical p... 150 6e-37
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 44 6e-05
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 44 6e-05
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 44 6e-05
Z79603-5|CAB01891.1| 435|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z73969-11|CAE17696.1| 132|Caenorhabditis elegans Hypothetical p... 27 7.1
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr... 27 9.4
>L15313-11|AAK68622.1| 208|Caenorhabditis elegans Hypothetical
protein ZK353.9 protein.
Length = 208
Score = 150 bits (363), Expect = 6e-37
Identities = 68/150 (45%), Positives = 102/150 (68%)
Frame = +1
Query: 1 DKRLDRSKFVESDADEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMTFDD 180
+KR DR ++VESD D ELLFNIPFTG+++L G+ + ++ SHP+K+RLFK+R M+FDD
Sbjct: 56 EKRDDRLEYVESDCDHELLFNIPFTGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSFDD 115
Query: 181 VMIEPDQVFELQKDTDGILEYCPKIVTFSSVSHLTMHFPKNFGAETTKIYYIGLKGEWTP 360
IE DQ +L++D G+++Y K F ++ +L++ NFG + TKIYYIGL+GE+
Sbjct: 116 CSIEADQEIDLKQDPQGLVDYPLKASKFGNIHNLSILVDANFGEDETKIYYIGLRGEFQH 175
Query: 361 SHRHGVTLCSYEVMPNLDDHKLKHLDSVAR 450
R + + +YE L DHK + D+VA+
Sbjct: 176 EFRQRIAIATYESRAQLKDHKNEIPDAVAK 205
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 44.0 bits (99), Expect = 6e-05
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Frame = +1
Query: 34 SDADEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 207
SD DE+L+ ++PF +K+ I + +D P K+++F N P T FD+ +EP Q+
Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211
Query: 208 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 309
E + + G + K V F +V ++ N G
Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 44.0 bits (99), Expect = 6e-05
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Frame = +1
Query: 34 SDADEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 207
SD DE+L+ ++PF +K+ I + +D P K+++F N P T FD+ +EP Q+
Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211
Query: 208 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 309
E + + G + K V F +V ++ N G
Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 44.0 bits (99), Expect = 6e-05
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Frame = +1
Query: 34 SDADEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 207
SD DE+L+ ++PF +K+ I + +D P K+++F N P T FD+ +EP Q+
Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211
Query: 208 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 309
E + + G + K V F +V ++ N G
Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247
>Z79603-5|CAB01891.1| 435|Caenorhabditis elegans Hypothetical
protein M163.5 protein.
Length = 435
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 79 NIKLKGIKVASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFELQ--KDTDGILEYCPK 252
N+K +V + SH S ++F+N+ F M DQ+++++ K +L
Sbjct: 367 NLKSIVSQVGGSEYTSHVSLNKMFENKIVEMFHATMFSMDQIYQIETLKTKREVLTEGMY 426
Query: 253 IVTFSSVSH 279
+ FS++ H
Sbjct: 427 FLIFSNLKH 435
>Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical
protein B0035.6 protein.
Length = 727
Score = 27.5 bits (58), Expect = 5.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 291 LSKELWGRNNKNLLHWIK 344
L ++LW N KN+ HW +
Sbjct: 676 LHRDLWAENEKNMEHWTR 693
>Z73969-11|CAE17696.1| 132|Caenorhabditis elegans Hypothetical
protein C12D8.15 protein.
Length = 132
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 4 KRLDRSKFVESDADEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMTFDDV 183
KRL++ + E +D E+ +P+ ++ + I ++SE+ +L + P ++DDV
Sbjct: 58 KRLNQCEKGECYSDVEI--EVPYYSSVNMPQILLSSEEHPPEYYELESARASPLPSYDDV 115
Query: 184 M 186
M
Sbjct: 116 M 116
>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical protein
K12D12.2 protein.
Length = 1696
Score = 26.6 bits (56), Expect = 9.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 175 DDVMIEPDQVFELQKDTDGILEYCPKI 255
+ V E ++ +QK+ +G+LEYC +I
Sbjct: 1231 ETVYTESGEMKYVQKEMEGVLEYCAEI 1257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,686,924
Number of Sequences: 27780
Number of extensions: 217122
Number of successful extensions: 499
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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