Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325B03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical pr... 39 0.002
AC006674-2|AAF39941.2| 437|Caenorhabditis elegans Hypothetical ... 29 2.0
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 28 4.7
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 28 4.7
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 28 4.7
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 28 4.7
U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like ... 27 6.2
AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SU... 27 6.2
>Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 4 GQYLFVCGDRVVRVLHNVCGYFTTIESCKRLLKSKQTSATVERLHKTIQDCKQTLKKFGK 183
G+Y+ CGD+ VRV+ NV + + + R L R+ + I + ++ LK+F K
Sbjct: 392 GKYIATCGDKYVRVIRNVPEWHSRVVKLNRELPEITQEGARRRIKEQIDEAQELLKQFEK 451
>Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 4 GQYLFVCGDRVVRVLHNVCGYFTTIESCKRLLKSKQTSATVERLHKTIQDCKQTLKKFGK 183
G+Y+ CGD+ VRV+ NV + + + R L R+ + I + ++ LK+F K
Sbjct: 392 GKYIATCGDKYVRVIRNVPEWHSRVVKLNRELPEITQEGARRRIKEQIDEAQELLKQFEK 451
>Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 4 GQYLFVCGDRVVRVLHNVCGYFTTIESCKRLLKSKQTSATVERLHKTIQDCKQTLKKFGK 183
G+Y+ CGD+ VRV+ NV + + + R L R+ + I + ++ LK+F K
Sbjct: 392 GKYIATCGDKYVRVIRNVPEWHSRVVKLNRELPEITQEGARRRIKEQIDEAQELLKQFEK 451
>AC006674-2|AAF39941.2| 437|Caenorhabditis elegans Hypothetical
protein K12H6.12 protein.
Length = 437
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 342 ENTITGLITYNCYDCK 295
E TIT L TY+CY+C+
Sbjct: 282 EQTITNLKTYHCYECR 297
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 366 TSYKYKHWENTITGLITYNCYDCKI 292
T Y +K + TITGL+ Y+ Y+ ++
Sbjct: 1969 TVYNHKDLDYTITGLLPYSLYEVRV 1993
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 366 TSYKYKHWENTITGLITYNCYDCKI 292
T Y +K + TITGL+ Y+ Y+ ++
Sbjct: 1969 TVYNHKDLDYTITGLLPYSLYEVRV 1993
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 366 TSYKYKHWENTITGLITYNCYDCKI 292
T Y +K + TITGL+ Y+ Y+ ++
Sbjct: 1969 TVYNHKDLDYTITGLLPYSLYEVRV 1993
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 366 TSYKYKHWENTITGLITYNCYDCKI 292
T Y +K + TITGL+ Y+ Y+ ++
Sbjct: 1969 TVYNHKDLDYTITGLLPYSLYEVRV 1993
>U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like
protease protein 1 protein.
Length = 697
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 292 NFTIVAIVSN*TGDSIFPMFIFVGSFYYYVIISRGGA 402
NF + I GDS +P +F+Y I+S+G A
Sbjct: 523 NFYLQLICDRSNGDSKYPKIYAFNTFFYSNIVSKGYA 559
>AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to
SUMO-1-specific protease protein.
Length = 697
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 292 NFTIVAIVSN*TGDSIFPMFIFVGSFYYYVIISRGGA 402
NF + I GDS +P +F+Y I+S+G A
Sbjct: 523 NFYLQLICDRSNGDSKYPKIYAFNTFFYSNIVSKGYA 559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,189,379
Number of Sequences: 27780
Number of extensions: 241482
Number of successful extensions: 598
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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