Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325B03f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   4.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   5.8  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 384 NNIIIKTSYKYKHWENTITGLITYN 310
           NN I   +YKY +  N     + YN
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYN 111


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 384 NNIIIKTSYKYKHWENTITGLITYN 310
           NN I   +YKY +  N     + YN
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYN 111


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 384 NNIIIKTSYKYKHWENTITGLITYN 310
           NN I   +YKY +  N     + YN
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYN 111


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 384 NNIIIKTSYKYKHWENTITGLITYN 310
           NN I   +YKY +  N     + YN
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYN 111


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 471 SHDVVKRRPVNCNTTHYRANWVPGP 397
           S +  K++P +C+T  YR   V  P
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTP 584


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 58  KRCGAPSRLGRRIRTNTG 5
           K    P+RL R  RT+TG
Sbjct: 99  KTFAVPARLTRHYRTHTG 116


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,942
Number of Sequences: 438
Number of extensions: 4026
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)