Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325B01f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 36 0.005
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 35 0.008
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 33 0.034
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 33 0.034
SPBC409.09c |mis13|cnl1|kinetochore protein Mis13|Schizosaccharo... 31 0.10
SPBC582.09 |pex11||peroxisomal biogenesis factor 11|Schizosaccha... 31 0.10
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 30 0.18
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 30 0.18
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 30 0.24
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 30 0.24
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 29 0.32
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 29 0.32
SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|c... 29 0.32
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 29 0.32
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 29 0.42
SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit... 29 0.42
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.42
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 29 0.56
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 29 0.56
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 29 0.56
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 28 0.73
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 0.73
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 28 0.73
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 28 0.97
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 1.3
SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit... 27 1.3
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 27 1.3
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 1.3
SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein Mc... 27 1.3
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 27 1.7
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 27 1.7
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 27 1.7
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 27 1.7
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 27 2.2
SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.2
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 26 3.0
SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces pom... 26 3.9
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 26 3.9
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 3.9
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 3.9
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 26 3.9
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 26 3.9
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 26 3.9
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 5.2
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 25 5.2
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 25 5.2
SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces ... 25 5.2
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 25 6.8
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 6.8
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 25 6.8
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 25 9.0
SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyc... 25 9.0
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 25 9.0
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 25 9.0
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 25 9.0
SPAC1782.02c |||conserved fungal protein|Schizosaccharomyces pom... 25 9.0
SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces... 25 9.0
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 9.0
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 25 9.0
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 35.5 bits (78), Expect = 0.005
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 5/154 (3%)
Frame = +1
Query: 73 INTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKEDLAIAKNTMIQ-----LVE 237
+N L++ N I + L+ + L+AKV N + + A T +E
Sbjct: 1390 VNKSLEKHNQIRQ---QLSQKTSELEAKVAECHQLNEQLNKPSATPTATTQSEPSTVSLE 1446
Query: 238 ENNQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKK 417
E N K L K S + + L +EE V+ ++ + KD+E+ E ERKK
Sbjct: 1447 EFNSTKEELSSTQRKLSEI-MDILNTTKEELEKVRQNSNKSEGTSKDTEIPNEEEMERKK 1505
Query: 418 YLEMQKELDLQISLKAEMEVAMKLLEKDIHDKQD 519
++ Q+ L L+ + E++ +LL K QD
Sbjct: 1506 VMQ-QEVLRLRSRIAKELQ-KNELLRKQNQVLQD 1537
Score = 31.5 bits (68), Expect = 0.079
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Frame = +1
Query: 76 NTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKEDLAIAKNTMIQLVEENNQLK 255
N + + N + E ++L + + + + K ESL L+KE LA ++++++ +
Sbjct: 576 NAVKENSNTLSEQIKNLESELNSSKIKNESLLNERNLLKEMLATSRSSILSHNSSAGNID 635
Query: 256 HALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEE-ERKKYLEMQ 432
+ + I + +R + E +++ S R++ D SEM +E E KY + Q
Sbjct: 636 DKM-KSIDESTRELEKNYEVYRNEMTAIQESLSKRNQ-DLLSEMEAIRKELENSKY-QQQ 692
Query: 433 KELDLQISLKAEMEVAMK 486
D + ++E K
Sbjct: 693 LSTDRLTNANNDVEAFKK 710
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 34.7 bits (76), Expect = 0.008
Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Frame = +1
Query: 61 KQRHINTMLDQKNYIEELNRHLNATVANLQAKVES-----LTTTNALMKEDLAIAKNTMI 225
K+ + L ++ Y E L+R A + L+ E L N +++ A + +
Sbjct: 30 KEVELQLSLKEQEY-ESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKV 88
Query: 226 QLVEENNQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEE 405
+L+EE + L ++ T+ +M+ T+++A+ E+R V+S+ +R +M + LEE
Sbjct: 89 ELLEEELETNDKLLRETTE--KMRQTDVKAEHFERR-VQSLERERD------DMEQKLEE 139
Query: 406 ERKKYLEMQKELD 444
KY +++ ELD
Sbjct: 140 MTDKYTKVKAELD 152
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 32.7 bits (71), Expect = 0.034
Identities = 30/145 (20%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Frame = +1
Query: 73 INTMLDQKNYIEEL-NRHLNATVANL-QAKVESLTTTNALMKEDLAIAKNTMIQLVEENN 246
I L++ + +EEL N A ++L +++ L + + +D +++N EEN
Sbjct: 3923 ITNTLNEDDDLEELANEEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEENQ 3982
Query: 247 QLKHALGQDITKDSRMKITEL---QADEEEKRSVKSVTSDRSKSDKDSEM------SKAL 399
L + DI +D + E + +EE+ + ++++S ++ +S++ +KAL
Sbjct: 3983 DLDEEVN-DIPEDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSKEDDNKAL 4041
Query: 400 EEERKKYLEMQKELDLQISLKAEME 474
E++ ++ E ++E+ + + E++
Sbjct: 4042 EDKDRQEKEDEEEMSDDVGIDDEIQ 4066
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 32.7 bits (71), Expect = 0.034
Identities = 34/167 (20%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Frame = +1
Query: 13 RGNDIAGNENNTNNEPKQRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMK 192
R + N ++ +E KQ++ N + + ++++N L + + +KVE+L + +K
Sbjct: 884 RTQERLANIEDSFSETKQQNENLQRESAS-LKQINNELESELLEKTSKVETLLSEQNELK 942
Query: 193 EDLAIAKNTM------IQLVEENN------------QLKHALGQDITKDSRM-KITELQA 315
E L++ + + ++ + ENN Q K +TKD+ + K+T+ +
Sbjct: 943 EKLSLEEKDLLDTKGELESLRENNATVLSEKAEFNEQCKSLQETIVTKDAELDKLTKYIS 1002
Query: 316 DEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELDLQIS 456
D + + +T+ + ++K + +L E K+ ++++E IS
Sbjct: 1003 DYKTEIQEMRLTNQK-MNEKSIQQEGSLSESLKRVKKLERENSTLIS 1048
Score = 30.3 bits (65), Expect = 0.18
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Frame = +1
Query: 91 QKNYIEELNRHLNATVANLQAKVESLTTTN---ALMKEDLAIAKNTMIQLVEENNQLKHA 261
Q+N E+ R L T +L A VE+L TT AL KE++ + +E++
Sbjct: 843 QQNSKSEVERDLVETNNSLTA-VENLLTTERAIALDKEEILRRTQERLANIEDSFSETKQ 901
Query: 262 LGQDITKDS---RMKITELQADEEEKRS-VKSVTSDRSK-SDKDSEMSKALEEERKKYLE 426
+++ ++S + EL+++ EK S V+++ S++++ +K S K L + + +
Sbjct: 902 QNENLQRESASLKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLDTKGELES 961
Query: 427 MQKELDLQISLKAEMEVAMKLLEKDIHDK 513
+++ +S KAE K L++ I K
Sbjct: 962 LRENNATVLSEKAEFNEQCKSLQETIVTK 990
Score = 29.9 bits (64), Expect = 0.24
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Frame = +1
Query: 55 EPKQRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKE--DLAIAKNTMIQ 228
E ++ H N +L + +E + +L+ + T L K+ DL ++++
Sbjct: 1152 ELQEIHENLLLKVSD-LENYKKKYEGLQLDLEGLKDVDTNFQELSKKHRDLTFNHESLLR 1210
Query: 229 LVEENNQLKHALGQDITKDSRMKITEL--QADEEEKRSVKSVTSDRSKSD---KDSEMSK 393
+ K +L KD K++ L Q +E ++ K +R ++ + S++ K
Sbjct: 1211 QSASYKE-KLSLASSENKDLSNKVSSLTKQVNELSPKASKVPELERKITNLMHEYSQLGK 1269
Query: 394 ALEEERKKYLEMQKELDLQISLKAEMEVAMKL 489
E+E++K L ++ + SLK+E+E KL
Sbjct: 1270 TFEDEKRKALIASRDNEELRSLKSELESKRKL 1301
>SPBC409.09c |mis13|cnl1|kinetochore protein
Mis13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 329
Score = 31.1 bits (67), Expect = 0.10
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 388 SKALEEERKKYLEMQKELDLQISLKAEMEVAMKLLEKDI 504
SKALEE+RKKY E ++ + I+ EV +LL +
Sbjct: 119 SKALEEQRKKYGETEEASEAAIARSIVQEVLNELLANKV 157
>SPBC582.09 |pex11||peroxisomal biogenesis factor
11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 238
Score = 31.1 bits (67), Expect = 0.10
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +1
Query: 319 EEEKRSVKSVTSDRSKSDKDSEMSKALEEERKK--YLEMQKELDLQISLKAEMEV 477
++ + +KS T + S +KDS + L++ERK+ + +Q LD I L AE+++
Sbjct: 159 QQNSKKIKSATQEAS--EKDSTSLQTLQKERKEILFFALQNALDATIPL-AELDI 210
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 30.3 bits (65), Expect = 0.18
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 226 QLVEENNQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTS-DRSKSDKDSEMSKALE 402
Q +N +L+ L + + +D+ K+ + ++ EEE + + + + D ++ E KA
Sbjct: 714 QDASDNEELERKLDK-VLEDADAKVKDEESSEEELMNDEQMLALDEKLAEVFRERKKASN 772
Query: 403 EERKKYLEMQKELDLQISLK 462
+E+KK + K+ +Q +K
Sbjct: 773 KEKKKNAQETKQQIVQFKVK 792
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 30.3 bits (65), Expect = 0.18
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 298 ITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELD 444
+ E + D +E+ ++ S+ + E + EE RKK E+Q+EL+
Sbjct: 425 VAEEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQEELE 473
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 29.9 bits (64), Expect = 0.24
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 310 QADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELD--LQISLKAEMEVAM 483
++ EE K++++++ +++K K+ E ALEE++ Y +QK D Q K + + +
Sbjct: 40 RSPEELKQAIEALR-EKAKEKKEKERILALEEKKTNYKILQKSNDETAQAMRKMQDQARL 98
Query: 484 KLLEK 498
+ L+K
Sbjct: 99 RDLQK 103
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 29.9 bits (64), Expect = 0.24
Identities = 32/165 (19%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Frame = +1
Query: 64 QRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKEDL--AIAKNTMIQLVE 237
Q ++T+ ++ +E+L L ++NL+ ++ ++ +++ +L +IA + + ++
Sbjct: 763 QSELDTLYLRRANLEKLQL-LVKDISNLEEEIRTIDRETEVLRIELPSSIAHHNLDEIYA 821
Query: 238 ENNQLKHALGQDITKDSRMKITELQ----------ADEEEKRSVKSVTSDRSKSDK-DSE 384
E +L G + R K+ E A+ E+K + + ++ ++ + +
Sbjct: 822 EREKLLEKRGYLRKQIERTKLEETSFKKKIDDAVLANNEQKLKLTKLNFQVNELEQLEKD 881
Query: 385 MSKALEE---ERKKYLEMQKELDLQISLKAEMEVAMKLLEKDIHD 510
++K+ E+ ++KK LE+ + Q E+E + LE DI +
Sbjct: 882 INKSSEDCDLQKKKLLEVSSKQGSQAPFLNELESEYEKLEADIQE 926
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 29.5 bits (63), Expect = 0.32
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +3
Query: 93 EKLY*RTKPTSERHRSKSPGESRKPDHDQCVDEGRPCNRKEHNDSASRRKQSTETRFRSR 272
E Y R S++ KS R HD ++ +RK H+D S RK +R + R
Sbjct: 240 ESNYTRLPKLSKKDLKKS---KRVKKHDYGGEDWSLLDRKFHDDDFSNRKLDLTSRAKRR 296
Query: 273 YNQRFENENHGT 308
N FE+ N G+
Sbjct: 297 AN--FEDVNDGS 306
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 29.5 bits (63), Expect = 0.32
Identities = 21/92 (22%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +1
Query: 154 KVESLTTTNALMKEDLAIAKNTMIQLVEENNQLKHALGQDITKDSRMKITELQADEEEKR 333
++E + +T L ++ + N +L + + + L ++ +S + + +ADEEE+
Sbjct: 185 QIEEVLSTE-LPQDRFSQLVNLGNRLTDYTVEQEEELNEEGVNESGVPVLFNEADEEEE- 242
Query: 334 SVKSVTSDRSKSDKDSEMSKAL-EEERKKYLE 426
+V+++ D D+D + ++ +EE KK +E
Sbjct: 243 AVEAMEEDEVAEDEDVVLETSISQEEEKKNIE 274
>SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 29.5 bits (63), Expect = 0.32
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 76 NTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKED-LAIAKNTMIQLVEENNQL 252
+T +DQ NY H N +AN+ V A ++ED + I + T+ + Q
Sbjct: 316 DTRIDQLNYAAIWQPHYNTCIANIGLTVSGGEREQAAVREDIIRIIQKTVGSIFGAGVQP 375
Query: 253 KHALGQDITK 282
K + DI +
Sbjct: 376 KWEISVDIQR 385
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 29.5 bits (63), Expect = 0.32
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = +1
Query: 37 ENNTNNEPKQRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKEDLAIAKN 216
++ E K + + + + +EE HL+ +L+ +VE L T N + + L +
Sbjct: 75 KDKLQQENKDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEYLETENTKLVKTLNSLNS 134
Query: 217 TMIQLVEE 240
+QL+ +
Sbjct: 135 EFLQLLRK 142
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 29.1 bits (62), Expect = 0.42
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Frame = +1
Query: 220 MIQLVEENNQLKHALGQDITKDSRMKITELQ--ADEE--EKRSVKSVTSDR-SKSDKDSE 384
+++ + +N +LK L + S+M++ L A E+ +KR K + D D+D +
Sbjct: 456 LLEKISKNKRLKFELNDRKSHASQMRMKSLATLASEQPIQKRKRKDQSEDNFGARDEDWK 515
Query: 385 M------SKALEEERKKYLEMQKELDLQI 453
+ ++ LEEERKK L+ L+ Q+
Sbjct: 516 VYHDVLTAEQLEEERKKLLDQIYSLEKQL 544
>SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit
Prp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 29.1 bits (62), Expect = 0.42
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 244 NQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYL 423
+ L H LG D KD T+++A+ K V R + ++++E K EERK+
Sbjct: 336 SNLMHVLGDDAIKDP----TKIEAEVR-----KQVEERRLRHERENEERKLTPEERKEKA 386
Query: 424 EMQKELDLQISLK 462
+K+ D L+
Sbjct: 387 FRKKDEDSAAGLR 399
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.1 bits (62), Expect = 0.42
Identities = 37/175 (21%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Frame = +1
Query: 25 IAGNENNTNNEPKQRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKEDLA 204
I+ E+ +N K+ +++LD KN +E + + ++L K+ES+ ++ +LA
Sbjct: 1421 ISLEESLSNQRQKE---SSLLDAKNELEHMLDDTSRKNSSLMEKIESINSSLDDKSFELA 1477
Query: 205 IAKNTMIQLVEENNQLKHALGQDITKDSRMKITELQADEEEKRSV-KSVTSDRSK----- 366
A + L + +++ +L ++I + ++Q DE + + +T+ ++
Sbjct: 1478 SAVEKLGALQKLHSE-SLSLMENIKSQLQEAKEKIQVDESTIQELDHEITASKNNYEGKL 1536
Query: 367 SDKDSEMSKALE--EERKKYLEMQKELDLQISLKAEMEVAM---KLLEKDIHDKQ 516
+DKDS + E E+ L +K ++S + E E+ +L + + H Q
Sbjct: 1537 NDKDSIIRDLSENIEQLNNLLAEEKSAVKRLSTEKESEILQFNSRLADLEYHKSQ 1591
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 28.7 bits (61), Expect = 0.56
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 64 QRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKE 195
QR +T+L+Q Y +E+NR +AN K E L +MK+
Sbjct: 507 QREFSTLLNQ--YKDEINREAAYNLANNYGKEEQLLQIATVMKD 548
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 28.7 bits (61), Expect = 0.56
Identities = 20/106 (18%), Positives = 51/106 (48%)
Frame = +1
Query: 202 AIAKNTMIQLVEENNQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDS 381
++ + + E+N L A + + K+++ +K +V+S T+D ++
Sbjct: 625 SLTEKLKVANAEKNAALCEAALEKVPLAKHNKLSDGTFSTPDKENVQS-TNDAHIMQENF 683
Query: 382 EMSKALEEERKKYLEMQKELDLQISLKAEMEVAMKLLEKDIHDKQD 519
+ KALE R+ ++ K+L + + E+ V +K++ ++++
Sbjct: 684 SLHKALEVMRETSSDLDKQLKDATASQKELIVQTSSFQKELVEERE 729
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 28.7 bits (61), Expect = 0.56
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +1
Query: 76 NTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKEDLAIAKNTMIQLVEENNQLK 255
NT+ ++ +EEL R + +Q E+ +++ KE+ NT+ Q + +
Sbjct: 184 NTIKYIESELEELEREDFTRLKKVQKTKENAEKADSVTKEEHQGGSNTLQQTKDVGGAI- 242
Query: 256 HALGQDITKDSRMKITELQADEEEKRSVKSV-TSDRSKSDKDSEM 387
A ++ K+ I E++ +++ S+ S T D ++D D E+
Sbjct: 243 -APAAEVGKE---VINEVENSKDDTYSLPSTSTDDEEENDSDEEV 283
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 28.3 bits (60), Expect = 0.73
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 280 KDSRMKI----TELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELDL 447
KD ++++ T+ E R K + + + S DS KA EEERK+ E++KE+
Sbjct: 319 KDPKLRVFPFTTKRATHSELLRCYKELVTPKI-SHVDSISIKAQEEERKRQAEIEKEI-R 376
Query: 448 QISLKAEMEVAMKL 489
Q L+ E KL
Sbjct: 377 QSRLQEEERKKKKL 390
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.3 bits (60), Expect = 0.73
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 277 TKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKE 438
T++ + +E +D E S + D S S DSE + E+E+K+ E E
Sbjct: 194 TEEKKEGSSESSSDSESSSDSSSESGD-SDSSSDSESESSSEDEKKRKAEPASE 246
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 304 ELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKE 438
E+ EEK+ S +S S+S+++ E +EE+++ + E
Sbjct: 125 EVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSE 169
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 28.3 bits (60), Expect = 0.73
Identities = 23/90 (25%), Positives = 45/90 (50%)
Frame = +1
Query: 214 NTMIQLVEENNQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSK 393
+T + ++EE QL++ L + +DS I + E+EK S+ + ++ K+
Sbjct: 712 STSVPVLEEL-QLRNKLFLTLLEDS---IGDGDVTEDEKISIARLEANIDKALLQLIQKA 767
Query: 394 ALEEERKKYLEMQKELDLQISLKAEMEVAM 483
LEE ++ E+ K L S+ A ++A+
Sbjct: 768 CLEERIERVYELTKTLRRTTSIAAAQKIAL 797
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 27.9 bits (59), Expect = 0.97
Identities = 12/58 (20%), Positives = 33/58 (56%)
Frame = +1
Query: 274 ITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELDL 447
+++D + +++ + +++R + V S+ D+DS+ EEE + +E +++ D+
Sbjct: 963 VSEDDEIPLSDARNKTKKRRVNRRVISEEYTFDQDSDAEGNQEEEVSRTIEEKQDNDI 1020
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 286 SRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEE--RKKYLEMQKELDLQISL 459
SR+K + + EEE +S +S S+S ++ S+ E E +KK + ++ +
Sbjct: 28 SRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSES 87
Query: 460 KAEMEVAMKLLEKDIHDKQD 519
E E + ++ D+ +
Sbjct: 88 SEEEEETESEEDSEVSDESE 107
>SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit
subunit Ker1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 304 ELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKE 438
E + +E+ S+K + D E K L++E+KK +KE
Sbjct: 84 EEMLETKEEESLKHAREENDDLHLDKETKKRLKKEKKKAARREKE 128
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 27.5 bits (58), Expect = 1.3
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +1
Query: 223 IQLVEENNQLKHALGQDITKDSRMK-ITELQADEEEKRSVKSVTSDRSKSDKDSEMSKAL 399
+Q ++ ++ K D + D K EL A+E+E++ S + DK S +++
Sbjct: 77 VQNIKPKSKKKKKKLNDSSDDIEGKYFEELLAEEDEEKDKDSAGLINDEEDK-SPAKQSV 135
Query: 400 EEERKKYLEMQKELDLQISLKAEMEVAMK 486
EER +++ E ++ L E+E + K
Sbjct: 136 LEERTSQEDVKSEREVAEKLANELEKSDK 164
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 328 KRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELDLQISLKAEMEVAMKLLEKDIH 507
K S K + S +S K + S++LEE KK + +EL+ + + K + +L EK +
Sbjct: 4 KLSKKKLKSLEYRSKKFDKKSQSLEEHEKKVQQKNEELEKKAADKISRD---ELPEKQLA 60
Query: 508 DKQD 519
D
Sbjct: 61 QSND 64
>SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein
Mcp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/88 (20%), Positives = 41/88 (46%)
Frame = +1
Query: 49 NNEPKQRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKEDLAIAKNTMIQ 228
+N K I T ++ + R + + +LQA+++ L + + E+++ K+
Sbjct: 55 DNIVKTEKIGTSNYYWSFPSDAKRSRESVLGSLQAQLDDLKQKSKTLDENISFEKSKRDN 114
Query: 229 LVEENNQLKHALGQDITKDSRMKITELQ 312
EN+ ++ L K+S +K+ + Q
Sbjct: 115 EGTENDANQYTLELLHAKESELKLLKTQ 142
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 27.1 bits (57), Expect = 1.7
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 280 KDSRMKITELQADEEEKRSVKSVTSDRS--KSDKDSEMS-KALEEERKKYLEMQKELDLQ 450
K+ ++ E+ + S K + R K DKD + +ALEE +KK + K LD +
Sbjct: 28 KEGENEVLEIDVTKPVPPSKKLMRKLRKAGKIDKDGNWTPEALEEAKKKEEKRLKRLDAK 87
Query: 451 ISLKAEME 474
K E E
Sbjct: 88 YGRKEEGE 95
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 27.1 bits (57), Expect = 1.7
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 316 DEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELDLQISLKAEMEVAMKLLE 495
DEEE+R + + K K+ E + +EE++ K E ++ QI K + E A +
Sbjct: 132 DEEERRKKELM----EKEKKEKERIRLIEEQKHKENEQRRLKQEQIDAKRKEEEAREKRM 187
Query: 496 KD 501
K+
Sbjct: 188 KE 189
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.1 bits (57), Expect = 1.7
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +1
Query: 232 VEENNQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEER 411
+E+N++ ++ G + D + E +E+EKR + + SKS K ++ K L +
Sbjct: 45 LEDNDEQGYSFGVNSEDDEEIDSDEAFDEEDEKR-FADWSFNASKSGKSNKDHKNLNNTK 103
Query: 412 KKYLEMQKELDLQIS---LKAEMEVAMKLLEKDIHD 510
+ L + + D ++ L+ E V + E ++ D
Sbjct: 104 EISLNEEDDSDDSVNSDKLENEGSVGSSIDENELVD 139
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/79 (21%), Positives = 39/79 (49%)
Frame = +1
Query: 235 EENNQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERK 414
+E++ HA + +DS +I + +EE++ K D+ + + +S ++
Sbjct: 35 QESSSEVHANPEPDNQDSNAEIL-IDVPKEERQKRKQELKDQLLKENEGSISSKKKKRLD 93
Query: 415 KYLEMQKELDLQISLKAEM 471
KY+E + + + SL A++
Sbjct: 94 KYIENKLKKEEVASLIAKL 112
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 26.6 bits (56), Expect = 2.2
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = +1
Query: 1 PNSARGNDIAGNENNTNNEPKQRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTTTN 180
P +R N I N + T N P RH +T+ + RH +A + L +
Sbjct: 27 PVPSRQNKIEEN-STTKNFPHSRHTSTVAGTEGGSSLSRRHTSAESRKALPNQQQLAQSG 85
Query: 181 ALMKED 198
L KE+
Sbjct: 86 LLNKEE 91
>SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 188
Score = 26.6 bits (56), Expect = 2.2
Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +1
Query: 226 QLVEENNQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEM-SKALE 402
+L EEN K + + KIT+ E +R + + S ++++ + E+ + A E
Sbjct: 90 ELGEENVDEKDVSKNEEVDVNGTKITDTSELTERERRKQELVSKKAEASRKMEVKAPAKE 149
Query: 403 EERKKYLEMQKELDLQISLKAEMEVAMKLLEKDIHDKQ 516
+++K E+ +++ ISL + E + +K+ + K+
Sbjct: 150 SKKRKVNELSQDV---ISLHSPKESNARKTKKNKNKKK 184
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 26.2 bits (55), Expect = 3.0
Identities = 22/90 (24%), Positives = 46/90 (51%)
Frame = +1
Query: 148 QAKVESLTTTNALMKEDLAIAKNTMIQLVEENNQLKHALGQDITKDSRMKITELQADEEE 327
Q+KV+ + T+A A+ K+ + +E+ ++ + + K S++K + ++ ++E
Sbjct: 416 QSKVQ-INGTSAYSTATDAVTKDA--EESQEDVEMDIVIEKKKKKSSKLKEADGESSKKE 472
Query: 328 KRSVKSVTSDRSKSDKDSEMSKALEEERKK 417
K+ K KS + SE S+ E +KK
Sbjct: 473 KKEKKD--KKHKKSKRKSEESEDGESPKKK 500
>SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 103 IEELNRHLNATVANLQAKVESLTTTN 180
+EE HL+A++ N+ A ES+ T++
Sbjct: 288 VEEAVEHLSASLGNIDAACESVITSS 313
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 3.9
Identities = 20/96 (20%), Positives = 42/96 (43%)
Frame = +1
Query: 40 NNTNNEPKQRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKEDLAIAKNT 219
N + E H N +L I E + L+ + + ++ ++ L+ +L +KN+
Sbjct: 633 NASMEELLNTHSNQLLISMTKITEHFQSLDEALQSARSSCAVPNSSLDLIVSELKDSKNS 692
Query: 220 MIQLVEENNQLKHALGQDITKDSRMKITELQADEEE 327
++ +E + Q Q + ++ ELQ D +E
Sbjct: 693 LLDALEHSLQDISMSSQKLGNGISSELIELQKDMKE 728
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 KPDHDQCVDEGRPCNRKEHNDSASRRKQSTE-TRFRSRYNQRFENENHG 305
K D D+ D+ C +EHND S+R Q + T + R ++ ++ G
Sbjct: 2205 KQDWDES-DKSVVCWIEEHNDDLSKRTQELKSTYYSERLSKLLRSDRKG 2252
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 307 LQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEE 408
+ E++K++ V + K +KD + K L+EE
Sbjct: 538 MTGSEQQKKAKAKVKAMNKKLEKDKQSGKVLDEE 571
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.8 bits (54), Expect = 3.9
Identities = 26/96 (27%), Positives = 47/96 (48%)
Frame = +1
Query: 211 KNTMIQLVEENNQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMS 390
K + L EE + K AL + + S I E + +E K S ++ ++K E
Sbjct: 605 KMQLKSLREEIDNTKEALDLSVKERS---IQEEKLNESLKTSKTNLEEQTQLAEKYHE-- 659
Query: 391 KALEEERKKYLEMQKELDLQISLKAEMEVAMKLLEK 498
+ L+ ++K Y +++ ELD S +ME M++L +
Sbjct: 660 ELLDNQQKLY-DLRIELDYTKSNCKQMEEEMQVLRE 694
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 25.8 bits (54), Expect = 3.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 367 SDKDSEMSKALEEERKKYLEMQKELDLQISLKAEMEVAMKLLEKDIHDKQ 516
S+ +S + L+EERKK L + E Q+S E+ A K EK + +
Sbjct: 21 SNFNSIFDRFLQEERKKLLNNKNEYLRQLS---EINEAQKKAEKSLEQTE 67
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 358 RSKSDKDSEMSKALEEERKKYLEMQKELDLQISLKAEMEVAMKLL 492
+++ K +S+ EEER++ L Q+ELD ++ K A ++L
Sbjct: 215 QNRRAKSKLISRRQEEERQRILREQRELD-SLNQKVSQAFAHEVL 258
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.4 bits (53), Expect = 5.2
Identities = 28/124 (22%), Positives = 57/124 (45%)
Frame = +1
Query: 142 NLQAKVESLTTTNALMKEDLAIAKNTMIQLVEENNQLKHALGQDITKDSRMKITELQADE 321
N++ +V S +T++ K++L T+ L E+ ++ K+ + +I +L D
Sbjct: 131 NVETEVTSRSTSSQ-EKDELEKQVKTLHDLNEQKDKK--------IKELKERINDLTYDY 181
Query: 322 EEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELDLQISLKAEMEVAMKLLEKD 501
E ++ + K S+ ALEE + K L + E++ + E +K EKD
Sbjct: 182 ETLKA--NADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKD 239
Query: 502 IHDK 513
+ ++
Sbjct: 240 LENR 243
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 129 RHRSKSPGESRKPDHDQCVDEGRPCNRKEHNDSASR-RKQSTETRFRSRYNQRFENENHG 305
+ + K GE +P DQC+ PC K ++ S R + + + N ++++++
Sbjct: 77 KKKVKCSGE--RPSCDQCLKHNIPCIYKSNSTKRSHSRHEEIHHQQQLHLNHQYQHQHKN 134
Query: 306 TAS 314
A+
Sbjct: 135 VAA 137
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.4 bits (53), Expect = 5.2
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Frame = +1
Query: 175 TNALMKEDLAIAKNTMIQLVE-------ENNQLKHALG-QDITKDSRMKITELQADEEEK 330
TN +EDL NT++Q +E E + ++ +L ++ T K Q + E+
Sbjct: 90 TNETQQEDLL---NTLLQQMEDTKITTAEKSSVQSSLNTKENTPQQPKKSRNRQKERLER 146
Query: 331 RSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELDL 447
R + + +M+ EE+KK+ ++ +E L
Sbjct: 147 RKAEMKKMSEQAELESEKMADLKNEEKKKFSKILEEAGL 185
>SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 780
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 139 ANLQAKVESLTTTNALMKEDLAIAKNTMIQLVEENNQLKHALGQDITKDSRMKITELQ-- 312
+NL A E+ + L++ + A+ + + EN++ A+ + T + + ELQ
Sbjct: 462 SNLLASQEAWMLVDQLIRLMMYQAQERFMTVTIENSESNPAVKHEATSSISLPMEELQQL 521
Query: 313 -ADEEEKRSVK 342
A E +RSVK
Sbjct: 522 VAMREPERSVK 532
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1
Query: 7 SARGNDIA--GNENNTNNEPKQRHINTMLDQKNYIE-ELNRHLNATVANLQAKVESLTTT 177
SA G + + N+ NE + + L++ + + ++NLQAKVE
Sbjct: 451 SANGTSYSKGSSRRNSKNETDEEKRKSFLERNRQAALKCRQRKKQWLSNLQAKVEFYGNE 510
Query: 178 NALMKEDLAIAKNTMIQL 231
N ++ ++ + ++ L
Sbjct: 511 NEILSAQVSALREEIVSL 528
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 61 KQRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTT 174
KQ + +LD NY ++LN+ + N QA +ES +T
Sbjct: 182 KQSDYSELLD--NYKKQLNKASESCKGNYQACIESRST 217
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 280 KDSRMKITELQADEEEKRSVKS-VTSDRSKSDKDSEMSKALEEERKKYLEMQKEL 441
K +I + ++ + + +KS V SD+ MS+A E E ++ + KEL
Sbjct: 598 KTEAAEIMRKRRNKVKPKGIKSEVASDKITDSSPGNMSEASESELEEVFKNPKEL 652
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 94 KNYIEELNRHLNATVANLQAKVESLTTTNALMK 192
+N I+ LN+ L+ AN+Q + +LT T+A++K
Sbjct: 45 RNSIKFLNKRLDTANANIQ--LLALTLTDAIVK 75
>SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 493
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 364 KSDKDSEMSKALEEERKKYLEMQ 432
+SD D E L ERKKYL+ Q
Sbjct: 39 ESDSDDEDDIFLAGERKKYLQNQ 61
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = -2
Query: 295 SFSNLWLYL----DLKRVSVDCFLRLAESLCSLRLQGLPS 188
+ +LW Y DLK S DC + ++ SL Q L S
Sbjct: 771 TIDHLWTYFPFKKDLKTKSFDCIVIASQPKLSLAFQNLTS 810
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 100 YIEELNRHLNATVANLQAKVESLTTTN 180
YI+ L +++T A+++ +V S+ TTN
Sbjct: 104 YIQPLISQISSTNASVETQVNSVQTTN 130
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/51 (21%), Positives = 25/51 (49%)
Frame = +1
Query: 280 KDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQ 432
+D K + + DE+ + VK+ ++ + + + + E ER + EM+
Sbjct: 19 QDEEKKKKDAEEDEKWSKGVKTNKKEQEAEKRKAALERKAERERLEKEEME 69
>SPAC1782.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 161
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 385 MSKALEEERKKYLEMQKELDLQISLKA 465
M A+ EER KYL+ QK+ + + KA
Sbjct: 129 MFAAMSEERAKYLKNQKKAEELAARKA 155
>SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 280 KDSRMK-ITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELDLQIS 456
K+ R + +T + E+R V ++ K ++ + K+L E+RK+ E+ + L
Sbjct: 31 KEKRKEYLTGFHKRKVERRKHAQVQLEQQKREERLALRKSLREQRKR--ELAERLAFSKE 88
Query: 457 LKAEME 474
L + +E
Sbjct: 89 LNSSLE 94
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 201 CNRKEHNDSASRRKQSTETRFRSRYNQRF-ENENHG 305
C R+ ND SR++ + + R N+R E+ HG
Sbjct: 426 CGRRYGNDPESRKELDKHSDWHFRINKRIRESSLHG 461
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 316 DEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKK 417
+EEEK+ K + D SK + +E K ++ R K
Sbjct: 601 EEEEKKIYKKLKKDLSKRLERAEKLKEADKSRAK 634
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.304 0.121 0.303
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,862,588
Number of Sequences: 5004
Number of extensions: 35775
Number of successful extensions: 189
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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