Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS325A07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92782-6|CAB07191.1|  319|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF016452-5|AAB66017.2|  210|Caenorhabditis elegans Hypothetical ...    28   3.5  
Z81526-1|CAB04264.1|  816|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z83120-6|CAB76722.1|  809|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z11505-5|CAA77589.1|  435|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca...    27   8.1  

>Z92782-6|CAB07191.1|  319|Caenorhabditis elegans Hypothetical
           protein F14F8.7 protein.
          Length = 319

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = +2

Query: 26  GVIRYVCIIVFVTPCTCDR---AKTNLIVIDTKFDFVSIV*GEY--LIDSSSLV 172
           G+I  VC I++  P  CD     K  L  + ++  +V I  G Y  LI+S ++V
Sbjct: 68  GIIHNVCSIIYYIPILCDHYYSLKVPLECVPSQSSYVKIAYGFYSSLINSVAIV 121


>AF016452-5|AAB66017.2|  210|Caenorhabditis elegans Hypothetical
           protein T05H4.11 protein.
          Length = 210

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 213 IDSHRQIWHDSYRATKLDESIKYSPYTIETKSNFVSIT 100
           ++S RQI H   R     +S+++   T+E+ S FV  T
Sbjct: 14  VNSQRQISHVQKRELTKRKSVRFETQTVESTSEFVGKT 51


>Z81526-1|CAB04264.1|  816|Caenorhabditis elegans Hypothetical
           protein F33H2.2 protein.
          Length = 816

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 132 IETKSNFVSITIRLVFARSHVHGVTNTIIHT 40
           ++   N +S+  RL FAR  V G  N  IHT
Sbjct: 279 LQLVKNAISVFCRLGFARKRVTGGENLTIHT 309


>Z83120-6|CAB76722.1|  809|Caenorhabditis elegans Hypothetical
           protein R06A4.9 protein.
          Length = 809

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 259 NSAWSLTAIQTFYINYR*PQTNLARLLSGH 170
           N  W L+A Q  Y+ Y  P  N A + S H
Sbjct: 186 NEQWLLSADQGGYVKYWQPNMNNAHMFSAH 215


>Z11505-5|CAA77589.1|  435|Caenorhabditis elegans Hypothetical
           protein F59B2.8 protein.
          Length = 435

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 329 AVGELSKHRFRYIAF*LNVRYSMKFC 252
           ++GE+SKH F      + +R S++FC
Sbjct: 127 SIGEVSKHLFYIFPTSIEIRLSVQFC 152


>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
           protein 4 protein.
          Length = 2325

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 82  SENQPNCNRYKVRFCFDRIRRIFNRFVELS--GPIGVVPDLSVAIDNLYKMFGSP 240
           +E  P   R +    FD    I    +E+   GP G+  D + AIDN+ K  G P
Sbjct: 655 NETMPAKVRVRWNEGFDGNEPIIKHAIEMRTMGPTGLWSDWTTAIDNIPKEEGKP 709


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,350,430
Number of Sequences: 27780
Number of extensions: 221339
Number of successful extensions: 514
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)