Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS325A01f
(325 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein. 58 6e-09
BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein. 58 8e-09
BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein. 58 8e-09
BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein. 58 8e-09
BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein. 58 8e-09
BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein. 58 8e-09
AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein pr... 58 8e-09
AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein. 58 8e-09
BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open read... 55 4e-08
AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein. 54 1e-07
BC115382-1|AAI15383.1| 246|Homo sapiens XRCC6 binding protein 1... 29 4.3
BC115381-1|AAI15382.1| 246|Homo sapiens XRCC6 binding protein 1... 29 4.3
BC012776-1|AAH12776.3| 246|Homo sapiens XRCC6 binding protein 1... 29 4.3
AF078164-1|AAD31085.1| 288|Homo sapiens Ku70-binding protein pr... 29 4.3
S80071-1|AAB47007.2| 636|Homo sapiens brain-specific L-proline ... 28 5.6
BC113425-1|AAI13426.1| 636|Homo sapiens solute carrier family 6... 28 5.6
BC093785-1|AAH93785.1| 636|Homo sapiens solute carrier family 6... 28 5.6
BC069631-1|AAH69631.1| 636|Homo sapiens solute carrier family 6... 28 5.6
X91117-2|CAC39181.1| 628|Homo sapiens SLC6A2 protein. 28 7.4
X91117-1|CAA62566.1| 617|Homo sapiens norepinephrine transporte... 28 7.4
M65105-1|AAA59943.1| 617|Homo sapiens noradrenaline transporter... 28 7.4
>AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = +1
Query: 127 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFH 294
M EV I AY K+ LHAA+YPH AVNG+ LA A ++ EG L + D +PLFH
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGEG-----LCLTDCVPLFH 51
>BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein.
Length = 210
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Frame = +1
Query: 127 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 288
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 289 FH 294
FH
Sbjct: 61 FH 62
>BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Frame = +1
Query: 127 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 288
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 289 FH 294
FH
Sbjct: 61 FH 62
>BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Frame = +1
Query: 127 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 288
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 289 FH 294
FH
Sbjct: 61 FH 62
>BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Frame = +1
Query: 127 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 288
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 289 FH 294
FH
Sbjct: 61 FH 62
>BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Frame = +1
Query: 127 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 288
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 289 FH 294
FH
Sbjct: 61 FH 62
>AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein
protein.
Length = 77
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Frame = +1
Query: 127 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 288
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 289 FH 294
FH
Sbjct: 61 FH 62
>AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein.
Length = 210
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Frame = +1
Query: 127 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 288
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 289 FH 294
FH
Sbjct: 61 FH 62
>BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open reading
frame 122 protein.
Length = 208
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 127 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFH 294
M EV I AY K+ LHAA+YPH AVNG+ LA A ++ E L + D +PLFH
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGE-----CLCLTDCVPLFH 51
>AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/56 (48%), Positives = 33/56 (58%)
Frame = +1
Query: 127 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFH 294
M EV I Y K+ LHAA+YPH AVNG+ LA A G + L + D +PLFH
Sbjct: 1 MGEVEISGPGYVKMCLHAARYPHAAVNGLFLAPA-----TGSGECLCLTDCVPLFH 51
>BC115382-1|AAI15383.1| 246|Homo sapiens XRCC6 binding protein 1
protein.
Length = 246
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 139 SIETGAYAKIILHAAKYPHCAVN 207
++ET Y K++L A K+ CAVN
Sbjct: 59 TLETNPYVKLLLDAMKHSGCAVN 81
>BC115381-1|AAI15382.1| 246|Homo sapiens XRCC6 binding protein 1
protein.
Length = 246
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 139 SIETGAYAKIILHAAKYPHCAVN 207
++ET Y K++L A K+ CAVN
Sbjct: 59 TLETNPYVKLLLDAMKHSGCAVN 81
>BC012776-1|AAH12776.3| 246|Homo sapiens XRCC6 binding protein 1
protein.
Length = 246
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 139 SIETGAYAKIILHAAKYPHCAVN 207
++ET Y K++L A K+ CAVN
Sbjct: 59 TLETNPYVKLLLDAMKHSGCAVN 81
>AF078164-1|AAD31085.1| 288|Homo sapiens Ku70-binding protein
protein.
Length = 288
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 139 SIETGAYAKIILHAAKYPHCAVN 207
++ET Y K++L A K+ CAVN
Sbjct: 101 TLETNPYVKLLLDAMKHSGCAVN 123
>S80071-1|AAB47007.2| 636|Homo sapiens brain-specific L-proline
transporter protein.
Length = 636
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 213 HTIHSTVWILSGVQYYFSVGSGF 145
H + S VWI + +Q ++S+G GF
Sbjct: 281 HLLSSKVWIEAALQIFYSLGVGF 303
>BC113425-1|AAI13426.1| 636|Homo sapiens solute carrier family 6
(neurotransmitter transporter, L-proline), member 7
protein.
Length = 636
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 213 HTIHSTVWILSGVQYYFSVGSGF 145
H + S VWI + +Q ++S+G GF
Sbjct: 281 HLLSSKVWIEAALQIFYSLGVGF 303
>BC093785-1|AAH93785.1| 636|Homo sapiens solute carrier family 6
(neurotransmitter transporter, L-proline), member 7
protein.
Length = 636
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 213 HTIHSTVWILSGVQYYFSVGSGF 145
H + S VWI + +Q ++S+G GF
Sbjct: 281 HLLSSKVWIEAALQIFYSLGVGF 303
>BC069631-1|AAH69631.1| 636|Homo sapiens solute carrier family 6
(neurotransmitter transporter, L-proline), member 7
protein.
Length = 636
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 213 HTIHSTVWILSGVQYYFSVGSGF 145
H + S VWI + +Q ++S+G GF
Sbjct: 281 HLLSSKVWIEAALQIFYSLGVGF 303
>X91117-2|CAC39181.1| 628|Homo sapiens SLC6A2 protein.
Length = 628
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 201 STVWILSGVQYYFSVGSGF 145
+TVWI + Q +FS+G+GF
Sbjct: 305 ATVWIDAATQIFFSLGAGF 323
>X91117-1|CAA62566.1| 617|Homo sapiens norepinephrine transporter
protein.
Length = 617
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 201 STVWILSGVQYYFSVGSGF 145
+TVWI + Q +FS+G+GF
Sbjct: 305 ATVWIDAATQIFFSLGAGF 323
>M65105-1|AAA59943.1| 617|Homo sapiens noradrenaline transporter
protein.
Length = 617
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 201 STVWILSGVQYYFSVGSGF 145
+TVWI + Q +FS+G+GF
Sbjct: 305 ATVWIDAATQIFFSLGAGF 323
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,906,203
Number of Sequences: 237096
Number of extensions: 739844
Number of successful extensions: 4991
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4990
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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