Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324H07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1195|AAF58734.1|  297|Drosophila melanogaster CG18004-P...    48   1e-05
AE013599-1194|AAM68756.2|  291|Drosophila melanogaster CG18004-P...    37   0.014
AY119470-1|AAM50124.1|  198|Drosophila melanogaster GH04870p pro...    33   0.23 
AE013599-1196|AAM68755.1|  198|Drosophila melanogaster CG18004-P...    33   0.23 

>AE013599-1195|AAF58734.1|  297|Drosophila melanogaster CG18004-PA,
           isoform A protein.
          Length = 297

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 34/114 (29%), Positives = 43/114 (37%), Gaps = 10/114 (8%)
 Frame = +1

Query: 94  MLDGWYCRSMANMQXXXXXXXXXXXXXPT-----RTHDSQKGYXXXXXXEPEA-----EP 243
           MLDGWYCRS+AN +             P      R     +G          A     E 
Sbjct: 1   MLDGWYCRSLANQEDGAIKDEPPSDDEPAQPARDRVPPISRGAAPASSSSVSAGLGAGET 60

Query: 244 NYSAQXXXXXXXXXXXIYENECFQDALRNSQKRLLKVXXXXXXXXXXXXQYDKP 405
           ++  +           IYENE FQD L  +Q+RLLKV             Y+KP
Sbjct: 61  DFKERYKNLKKKLKFLIYENEYFQDLLHTNQRRLLKVSRDRTFLLDRLLVYEKP 114


>AE013599-1194|AAM68756.2|  291|Drosophila melanogaster CG18004-PB,
           isoform B protein.
          Length = 291

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +1

Query: 292 IYENECFQDALRNSQKRLLKVXXXXXXXXXXXXQYDKP 405
           IYENE FQD L  +Q+RLLKV             Y+KP
Sbjct: 71  IYENEYFQDLLHTNQRRLLKVSRDRTFLLDRLLVYEKP 108


>AY119470-1|AAM50124.1|  198|Drosophila melanogaster GH04870p
           protein.
          Length = 198

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 292 IYENECFQDALRNSQKRLLKVXXXXXXXXXXXXQYDKP 405
           + ENE FQD L  +Q+RLLKV             Y+KP
Sbjct: 9   LQENEYFQDLLHTNQRRLLKVSRDRTFLLDRLLVYEKP 46


>AE013599-1196|AAM68755.1|  198|Drosophila melanogaster CG18004-PC,
           isoform C protein.
          Length = 198

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 292 IYENECFQDALRNSQKRLLKVXXXXXXXXXXXXQYDKP 405
           + ENE FQD L  +Q+RLLKV             Y+KP
Sbjct: 9   LQENEYFQDLLHTNQRRLLKVSRDRTFLLDRLLVYEKP 46


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,464,215
Number of Sequences: 53049
Number of extensions: 373300
Number of successful extensions: 887
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)