Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324H07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14635-7|AAC46658.2|  521|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AL132898-10|CAC14416.2|  346|Caenorhabditis elegans Hypothetical...    28   4.7  

>U14635-7|AAC46658.2|  521|Caenorhabditis elegans Hypothetical
           protein C27H5.4a protein.
          Length = 521

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -2

Query: 508 NSTNFHFLSFYLFPFVCDQYHLKILYLHFLKLCFLVCHIAVVYPTKNY 365
           +S N+ F S Y+  F  D++HL   YL  +++ FLV + AV  P   Y
Sbjct: 23  DSINYVFTSKYIQVFF-DEFHLPPSYLKVVQILFLVWN-AVNDPMMGY 68


>AL132898-10|CAC14416.2|  346|Caenorhabditis elegans Hypothetical
           protein Y59A8B.21 protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 474 YFHLYVISII*RFCIFTF*SCAFW 403
           Y +L++I+ I  FC F F SC  W
Sbjct: 315 YTYLFIITSIFPFCAFIFISCIQW 338


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,907,760
Number of Sequences: 27780
Number of extensions: 203758
Number of successful extensions: 482
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)