Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324H06f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0714 - 5451246-5451408,5453401-5453534,5453608-5453796,545... 54 7e-08
03_06_0358 + 33366265-33366447,33367371-33367468,33367910-333689... 53 2e-07
01_06_1509 - 37855894-37856679,37856766-37856952,37857508-378575... 31 0.42
09_04_0517 - 18253325-18253870,18254209-18254781,18254888-182551... 31 0.56
03_06_0683 - 35522534-35522647,35523009-35523143,35523224-355233... 29 1.7
08_02_0687 + 20053426-20053824,20054194-20054508 28 4.0
09_06_0217 + 21629666-21629921,21630691-21630878,21630979-216310... 28 5.2
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 5.2
07_01_0603 + 4489864-4491240 27 6.9
04_04_0199 - 23519597-23520282,23520913-23521471 27 6.9
02_02_0677 + 12859101-12859413,12862450-12862817 27 6.9
12_02_1152 + 26515422-26515460,26516317-26516454,26518647-265188... 27 9.1
12_01_1008 - 10238721-10238777,10238889-10239307,10240418-102405... 27 9.1
10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 27 9.1
>07_01_0714 -
5451246-5451408,5453401-5453534,5453608-5453796,
5454313-5454825,5455815-5456856,5457283-5457380,
5458224-5458451
Length = 788
Score = 54.0 bits (124), Expect = 7e-08
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = +3
Query: 30 FAVPDFVPERYVKDLARSCVGGEELQQQKEKIXNLAEETASALKKNVYENYMQFIETATE 209
F +F P+ YV+ ++ + +E++ + +L + +A ++++VY NY FI T+ E
Sbjct: 55 FKTDNFDPDAYVQSKCQT-MNEKEIRHLCSYLQDLKKASAEEMRRSVYANYAAFIRTSKE 113
Query: 210 ISHLETEMYKLSHLLSEQRSVLTVLSHA----SILGNENGLSRESLDN 341
IS LE E+ + +LL+ Q +++ LS S+ N G + + + N
Sbjct: 114 ISDLEGELLSIRNLLNTQAALIHGLSEGVQIDSLTSNTEGSAEDDISN 161
>03_06_0358 +
33366265-33366447,33367371-33367468,33367910-33368945,
33369042-33369554,33370456-33370644,33370715-33370848,
33371196-33371358
Length = 771
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Frame = +3
Query: 21 MDKFAVPDFVPERYVKDLARSCVGGEELQQQKEKIXNLAEETASALKKNVYENYMQFIET 200
M F +F P+ YV+ + + +E++ + +L + ++ ++++VY NY FI T
Sbjct: 37 MKIFKTDNFDPDAYVQSKCHA-MNEKEIRHLCSYLQDLKKASSEEMRRSVYANYAAFIRT 95
Query: 201 ATEISHLETEMYKLSHLLSEQRSVLTVLSHA----SILGNENGLSRESLDN----HDVXX 356
+ EIS LE E+ + +LLS Q +++ LS S+ G + E D ++
Sbjct: 96 SKEISDLERELLSVRNLLSTQSALIRGLSEGVHIDSLTTGSEGSAEEGTDEDQEPSEIQN 155
Query: 357 XXXXXXXKNKLNLITEKVESCMNLLDVPDRTLLHEGDLLEIDAEENTALQR 509
+ L +V+ ++ LD +R + E + + A++R
Sbjct: 156 WCTDFPEMLDVLLAERRVDEALDALDEAERVVADEKQKQTLTTADILAVKR 206
>01_06_1509 -
37855894-37856679,37856766-37856952,37857508-37857580,
37857772-37857816,37858004-37858010
Length = 365
Score = 31.5 bits (68), Expect = 0.42
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Frame = +3
Query: 12 EIDMDKFAVPDFVPERYVKDLARS--CVGGEEL-QQQKEK-----IXNLAEETASAL--K 161
E D KF V + V + D AR +GG++ +QQK K I +L EE + +
Sbjct: 227 EPDKRKFNVEEGVGHHFSLDDARDERPIGGKQAKEQQKRKRKDQAIIDLEEEFHKLVDAQ 286
Query: 162 KNVYENYMQFIETATEISHLETEMYKLSHLLSEQRSVLTVL 284
E + + +ET +S E KL +L ++ T+L
Sbjct: 287 NTANEGHKEMLETQRRVSSENVEARKLKYLAEKEHKESTIL 327
>09_04_0517 -
18253325-18253870,18254209-18254781,18254888-18255100,
18255554-18255685,18255804-18255944,18256104-18256325
Length = 608
Score = 31.1 bits (67), Expect = 0.56
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 129 NLAEETASALKKNVYENYMQFIETATEISHLETEMYKLSHL-LSEQRSVLTVLSHASILG 305
NL AL KN+YE + I+TAT + EM KL H E S T+ +H I+
Sbjct: 63 NLCIPKEWALIKNLYEEMRERIDTATMSGKIPEEM-KLKHKGFDEWNSDFTLKNHQPIVQ 121
Query: 306 -NENGLSRESLDN 341
+G +R ++D+
Sbjct: 122 ILIDGKNRNAIDD 134
>03_06_0683 -
35522534-35522647,35523009-35523143,35523224-35523346,
35523640-35523741,35523884-35524090,35524634-35524748,
35524839-35525048,35525135-35525234,35525448-35525609,
35525737-35526073,35526472-35526678,35527284-35527736
Length = 754
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +3
Query: 24 DKFAVPDFVPERYVKDLARSCVGGEELQQQ-KEKIXNLAEETASALKKNVYENYMQFIET 200
D F PDF P+ YV DL RS V + L + + + +L E + + +Y F+
Sbjct: 29 DSFLRPDFDPDAYVADL-RSYVPLDSLAAELRSHLASLRAELVGLINR----DYADFVGL 83
Query: 201 ATEISHLETEMYKLSHLLSEQRSVLTVLSHASILG 305
+ + ++ ++ L+E R + A+ G
Sbjct: 84 SARLKGVDAAAARMRPPLAELRDKVASFRAAAAAG 118
>08_02_0687 + 20053426-20053824,20054194-20054508
Length = 237
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 36 VPDFVPERYVKDLARSCVGGEELQQQKEKIXNLAEETASALK 161
+P FV + +V+ LAR+ E +++KEK N + +++A++
Sbjct: 99 LPAFVVQLFVRILARARFEAREAKKEKEKRENNEKTSSTAIR 140
>09_06_0217 +
21629666-21629921,21630691-21630878,21630979-21631042,
21631150-21631232,21631627-21631710,21631811-21631963,
21632150-21632335,21632596-21632663,21632896-21632992
Length = 392
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 429 LDVPDRTLLHEGDLLEIDAEENTALQRM 512
++V RTL DLLE AE NT+L R+
Sbjct: 275 VEVETRTLQEVKDLLEYAAENNTSLTRI 302
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +3
Query: 114 KEKIXNLAEETASALKKNVYENYMQFIETA--TEISHL--ETEMY--KLSHLLSEQRSVL 275
+EK+ + E + LK N E Y++ ++ A + L ETE Y KL L +S+
Sbjct: 915 REKLDRIQREKINLLKNNDVEGYLRMVQDAKSDRVKQLLRETEKYLQKLGAKLQGSKSMD 974
Query: 276 TVLSHAS 296
+S+AS
Sbjct: 975 GRVSYAS 981
>07_01_0603 + 4489864-4491240
Length = 458
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 277 VSTERCSLNKCDSLYISVSRWD 212
+ TERC D Y+SV RWD
Sbjct: 348 IGTERCLNPSDDERYLSVFRWD 369
>04_04_0199 - 23519597-23520282,23520913-23521471
Length = 414
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 192 IETATEISHLETEMYKLSHLLSEQRSVLTVL 284
+ET ++SHLE ++ + S+ + E+ SVL+ L
Sbjct: 222 LETNQKMSHLEQKLEEASNTIREKNSVLSQL 252
>02_02_0677 + 12859101-12859413,12862450-12862817
Length = 226
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +3
Query: 108 QQKEKIXNLAEETASALKKNVYENYMQFIETATEISHLETEMYKLSHLLSEQR 266
Q+K + ++AE+ A A++K +++ + HL ++ + H LS +
Sbjct: 174 QEKTEEVHVAEDKALAIRKQSESLLLEYDRLLEDNQHLREQLQSIDHRLSSPK 226
>12_02_1152 +
26515422-26515460,26516317-26516454,26518647-26518809,
26519165-26519213,26519315-26519390,26520348-26520473
Length = 196
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 387 LNLITEKVESCMNLLDVPDRTLLHEGDLLE 476
LN++T + C NLL V R L+H L+
Sbjct: 22 LNIVTVRCGHCTNLLSVNLRGLMHSAPALQ 51
>12_01_1008 -
10238721-10238777,10238889-10239307,10240418-10240548,
10240678-10240781,10241299-10241739
Length = 383
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 384 KLNLITEKVESCMNLLDVPDRTLL-HEGDLLE 476
KL + E++ SC+ L + +RTLL H LLE
Sbjct: 106 KLENVHEEINSCLRLYHLANRTLLYHNIKLLE 137
>10_08_0198 +
15688142-15690427,15690524-15690607,15691232-15691336,
15691420-15691528,15693037-15693188,15693278-15693583
Length = 1013
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 125 TKFSRRNRKCPKEKCLRELYAVYRDCDGDIPPRNR 229
++ S+ R+ P+E+ R L Y+D DGD R R
Sbjct: 64 SRVSKVPRRSPEERSERRLSDGYKDRDGDSSRRRR 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,470,372
Number of Sequences: 37544
Number of extensions: 185081
Number of successful extensions: 513
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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