Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324H04f
         (331 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00064-4|AAN84795.1|  232|Caenorhabditis elegans Hypothetical pr...    32   0.11 
U42846-1|AAA83600.2|  872|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z30317-4|CAB54306.1|  378|Caenorhabditis elegans Hypothetical pr...    27   3.2  
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.     27   3.2  
U53154-12|AAC25847.2|  380|Caenorhabditis elegans Serpentine rec...    27   4.2  
AF003130-12|AAB54128.2|  175|Caenorhabditis elegans Hypothetical...    27   4.2  
AF003130-11|AAM15579.1|  250|Caenorhabditis elegans Hypothetical...    27   4.2  
AF003130-9|AAP68939.1|  307|Caenorhabditis elegans Hypothetical ...    27   4.2  
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr...    26   7.3  
U00064-5|AAN84796.1|  237|Caenorhabditis elegans Hypothetical pr...    26   7.3  
Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    25   9.7  
AF067214-6|AAC17005.2|  457|Caenorhabditis elegans Hypothetical ...    25   9.7  

>U00064-4|AAN84795.1|  232|Caenorhabditis elegans Hypothetical
           protein ZC155.5a protein.
          Length = 232

 Score = 31.9 bits (69), Expect = 0.11
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +1

Query: 136 GHPRSNGSLMSPTCYLCRTKRKRTTKCSYIV*APRIWICSTS*TPLRLSSCW 291
           GHPR   +L   TC   + K   T   S  V     W+C T+   +R+ SCW
Sbjct: 51  GHPRCRLTLHKDTCSSPQFKLNDTLSWSTRVCYK--WVCDTTKYAMRVESCW 100


>U42846-1|AAA83600.2|  872|Caenorhabditis elegans Hypothetical
           protein T19D2.1 protein.
          Length = 872

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
 Frame = -2

Query: 81  GLWSSW---PFPSCTLRCSEIEAR 19
           G WS+W   P P+C  RCS+ E R
Sbjct: 445 GGWSTWNDRPAPTCGGRCSQCEIR 468


>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical
           protein E03A3.6 protein.
          Length = 2089

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
 Frame = +3

Query: 141 PEIK----RIFDVTDMLPLPNKTKENYKVFIYRLSTTDLD-LFN 257
           PE+K    +IF+  D+ PLP +TKE Y     R+   D D +FN
Sbjct: 571 PELKILLCKIFE-PDLCPLPFETKEVYGFMTGRIGGDDYDEMFN 613


>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical
           protein E03A3.6 protein.
          Length = 2089

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
 Frame = +3

Query: 141 PEIK----RIFDVTDMLPLPNKTKENYKVFIYRLSTTDLD-LFN 257
           PE+K    +IF+  D+ PLP +TKE Y     R+   D D +FN
Sbjct: 571 PELKILLCKIFE-PDLCPLPFETKEVYGFMTGRIGGDDYDEMFN 613


>Z30317-4|CAB54306.1|  378|Caenorhabditis elegans Hypothetical
           protein T16G12.8 protein.
          Length = 378

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 219 IYRLSTTDLDLFNFVDAVKTFFMLADT 299
           +Y   + +L +F+F+ A  TFF+L  T
Sbjct: 264 LYASVSNNLSVFSFIKAYSTFFLLVST 290


>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
          Length = 2084

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
 Frame = +3

Query: 141 PEIK----RIFDVTDMLPLPNKTKENYKVFIYRLSTTDLD-LFN 257
           PE+K    +IF+  D+ PLP +TKE Y     R+   D D +FN
Sbjct: 564 PELKILLCKIFE-PDLCPLPFETKEVYGFMTGRIGGDDYDEMFN 606


>U53154-12|AAC25847.2|  380|Caenorhabditis elegans Serpentine
           receptor, class w protein127 protein.
          Length = 380

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 283 KKVLTASTKLNRSRSVVLRRYMNTL*FSFVLFGRG 179
           +K+ + S+KL  SR+       NT+ FS VLF  G
Sbjct: 257 RKMTSTSSKLKESRNTTKVVVYNTIIFSIVLFPIG 291


>AF003130-12|AAB54128.2|  175|Caenorhabditis elegans Hypothetical
           protein F55A12.2a protein.
          Length = 175

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 274 RLSSCWPIRG*RRTXTFP 327
           RLSS WP R  RR  T+P
Sbjct: 12  RLSSTWPFRDERRALTWP 29


>AF003130-11|AAM15579.1|  250|Caenorhabditis elegans Hypothetical
           protein F55A12.2b protein.
          Length = 250

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 274 RLSSCWPIRG*RRTXTFP 327
           RLSS WP R  RR  T+P
Sbjct: 12  RLSSTWPFRDERRALTWP 29


>AF003130-9|AAP68939.1|  307|Caenorhabditis elegans Hypothetical
           protein F55A12.2c protein.
          Length = 307

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 274 RLSSCWPIRG*RRTXTFP 327
           RLSS WP R  RR  T+P
Sbjct: 69  RLSSTWPFRDERRALTWP 86


>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
           protein F42C5.10 protein.
          Length = 1292

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 173 HATSAEQNERELQSVHISSEHHGS 244
           +ATS   N +E  +VH S  H GS
Sbjct: 894 YATSQHSNAQEYSTVHGSQTHRGS 917


>U00064-5|AAN84796.1|  237|Caenorhabditis elegans Hypothetical
           protein ZC155.5b protein.
          Length = 237

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 244 WICSTS*TPLRLSSCW 291
           W+C T+   +R+ SCW
Sbjct: 90  WVCDTTKYAMRVESCW 105


>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 112 SCSVREIPGHPRSNGSLMSPTC 177
           SC + EI G  R N  L  P C
Sbjct: 162 SCCIEEIEGCARENAPLFEPGC 183


>AF067214-6|AAC17005.2|  457|Caenorhabditis elegans Hypothetical
           protein F56C3.2 protein.
          Length = 457

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = -3

Query: 302 PRIGQHE--ESLN-GVYEVEQIQIRGAQTIYEH 213
           PRI  H+  E  N G Y+ E+ +  G +T Y H
Sbjct: 403 PRIELHQISELFNLGTYQKEEFEYPGIETFYNH 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,271,604
Number of Sequences: 27780
Number of extensions: 137710
Number of successful extensions: 440
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)