Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324H02f
         (323 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   2.9  
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    22   6.6  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    21   8.8  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 263 CK*MQIKKNEAPLACNVRIIQP*F 192
           CK   +  NE  LACN+R +   F
Sbjct: 55  CKYRILPGNEVDLACNLRTVNSEF 78


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 171 KLYLPKCKLWLNNSN 215
           +L LPKC   L+NSN
Sbjct: 294 QLVLPKCDELLSNSN 308


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 127 TIYYTANIEIAFYRVNYICRNVNY 198
           T++YT N+ +    ++++C  V Y
Sbjct: 232 TLFYTVNLILPTVLISFLCVLVFY 255


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,006
Number of Sequences: 2352
Number of extensions: 4010
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22045617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)