Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324H01f
         (519 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    27   0.29 
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    27   0.50 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.5  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   4.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.2  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.1  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 0.29
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
 Frame = +3

Query: 192 KPVLRPLPFRRLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 356
           +PV+      +L  GLT++    V +   L++T  W+ L W+ +  ++++     VR+LR
Sbjct: 23  RPVVNESDPLQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNVRWNSSEYGGVRDLR 82


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +3

Query: 192 KPVLRPLPFRRLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 356
           +PV+      +L  GLT++    V +   L++T  W+ L W+ +  +++      VR+LR
Sbjct: 55  RPVVNESDPLQLSFGLTLMQIIDVDEKNQLLVTNIWLKLEWNDMNLRWNTSEYGGVRDLR 114


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 139 CCWIDLRFNETVSKII 92
           CCW+ L+F E V+ I+
Sbjct: 790 CCWVWLKFQEWVAFIV 805


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 351 GSSRSCLNTVVGVDPNGASSNRPLASNAD 265
           G SRS ++  +  +  G S+ RP  + AD
Sbjct: 33  GRSRSFVDNAIRSEATGKSTGRPRKTTAD 61


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 222 RLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNKNV 344
           +LQ  L+ L     HQ  H+ +T     + W+ L ++Y N  V
Sbjct: 162 KLQYLLSALKGDAAHQFEHMQITADNYYVTWEALLKRYDNSKV 204


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +3

Query: 192 KPVLRPLPFRRLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 356
           +PV        ++ GLT+     V +   L++T  W+ L W+    ++++     VR+LR
Sbjct: 40  RPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLRWNDSEYGGVRDLR 99


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,961
Number of Sequences: 2352
Number of extensions: 8605
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)