Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324H01f
         (519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121633-1|AAM51960.1|  219|Drosophila melanogaster GM02293p pro...    48   8e-06
AF055900-1|AAC14276.1|  228|Drosophila melanogaster clathrin lig...    48   8e-06
AE014296-3305|AAF49047.1|  219|Drosophila melanogaster CG6948-PA...    48   8e-06
AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-P...    29   2.9  
BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p pro...    28   8.7  
AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-P...    28   8.7  
AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-P...    28   8.7  

>AY121633-1|AAM51960.1|  219|Drosophila melanogaster GM02293p
           protein.
          Length = 219

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
 Frame = +2

Query: 95  DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAIST 223
           DFGD F   E VDPAA+FLAREQ+ L  LE E+   +++ PPA ST
Sbjct: 2   DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAAST 47



 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 440 QIAKKELEDWYKSHEEQISKTKAANR 517
           Q +KKEL+DW +   E ISKTK A+R
Sbjct: 133 QQSKKELDDWLRQIGESISKTKLASR 158


>AF055900-1|AAC14276.1|  228|Drosophila melanogaster clathrin light
           chain protein.
          Length = 228

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
 Frame = +2

Query: 95  DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAIST 223
           DFGD F   E VDPAA+FLAREQ+ L  LE E+   +++ PPA ST
Sbjct: 2   DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAAST 47



 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 440 QIAKKELEDWYKSHEEQISKTKAANR 517
           Q +KKEL+DW +   E ISKTK A+R
Sbjct: 133 QQSKKELDDWLRQIGESISKTKLASR 158


>AE014296-3305|AAF49047.1|  219|Drosophila melanogaster CG6948-PA
           protein.
          Length = 219

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
 Frame = +2

Query: 95  DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAIST 223
           DFGD F   E VDPAA+FLAREQ+ L  LE E+   +++ PPA ST
Sbjct: 2   DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAAST 47



 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 440 QIAKKELEDWYKSHEEQISKTKAANR 517
           Q +KKEL+DW +   E ISKTK A+R
Sbjct: 133 QQSKKELDDWLRQIGESISKTKLASR 158


>AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-PA
           protein.
          Length = 2768

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 146 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 301
           ++ E  ++   ED+L +S    AI++ST G  D     ++SA    G  D+A
Sbjct: 835 ISEESTEVPVAEDDLSSSTSASAIASSTEGVQDAASETTSSAPARAGDKDEA 886


>BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p
           protein.
          Length = 1240

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 146 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 268
           LA E       ED++  + P P   T      +FVEVP A+
Sbjct: 20  LANENISTEEFEDQIINAVPEPVKVTKPKAQAEFVEVPKAT 60


>AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-PB,
           isoform B protein.
          Length = 1431

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 146 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 268
           LA E       ED++  + P P   T      +FVEVP A+
Sbjct: 20  LANENISTEEFEDQIINAVPEPVKVTKPKAQAEFVEVPKAT 60


>AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-PA,
           isoform A protein.
          Length = 1431

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 146 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 268
           LA E       ED++  + P P   T      +FVEVP A+
Sbjct: 20  LANENISTEEFEDQIINAVPEPVKVTKPKAQAEFVEVPKAT 60


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,683,321
Number of Sequences: 53049
Number of extensions: 394628
Number of successful extensions: 1633
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)