Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324G10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28991-4|AAK68310.1|  227|Caenorhabditis elegans Hypothetical pr...   153   1e-37
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U28991-4|AAK68310.1|  227|Caenorhabditis elegans Hypothetical
           protein F08F8.7 protein.
          Length = 227

 Score =  153 bits (370), Expect = 1e-37
 Identities = 73/132 (55%), Positives = 94/132 (71%), Gaps = 4/132 (3%)
 Frame = +3

Query: 135 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI- 311
           L+  + PSILNADL+ L  E +KLL  GAD+LHLDVMDG FVPNLTFGHPVV+ LR  + 
Sbjct: 3   LRPFVCPSILNADLASLASECKKLLAAGADWLHLDVMDGHFVPNLTFGHPVVESLRKSLG 62

Query: 312 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKD---VIEVCRKVREHGMKVGVAI 482
            + FF+ H+MV  P QW+ PMA AG +Q+TFH E V     V E+  K+R+ GMKVG+++
Sbjct: 63  AEPFFDVHLMVSNPGQWVEPMAKAGASQFTFHYEAVDGDVAVSELIEKIRKSGMKVGLSV 122

Query: 483 KPGTPVSEVEKY 518
           KPGT V  + K+
Sbjct: 123 KPGTSVEHILKH 134


>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
           protein K08E4.1 protein.
          Length = 1208

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 9/25 (36%), Positives = 19/25 (76%)
 Frame = +3

Query: 381 AGVNQYTFHIEPVKDVIEVCRKVRE 455
           + +NQ+T  + P+KD+++V R V++
Sbjct: 249 SALNQFTITMVPIKDMVDVLRVVKD 273


>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
           protein K08E4.1 protein.
          Length = 1208

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 9/25 (36%), Positives = 19/25 (76%)
 Frame = +3

Query: 381 AGVNQYTFHIEPVKDVIEVCRKVRE 455
           + +NQ+T  + P+KD+++V R V++
Sbjct: 249 SALNQFTITMVPIKDMVDVLRVVKD 273


>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
           protein C11E4.6 protein.
          Length = 1170

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 396 YTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 494
           Y FH+    + +E  + +REHG  +    + GT
Sbjct: 217 YPFHLAAKYNHVECMQALREHGFSINYTTEDGT 249


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,542,036
Number of Sequences: 27780
Number of extensions: 204020
Number of successful extensions: 619
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)