Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324G07f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0257 - 16255063-16255183,16255258-16255334,16255861-162559...   153   1e-37
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310...    29   3.0  
06_01_1118 - 9213785-9215051,9215811-9215992,9216075-9216611,921...    28   5.2  
09_04_0266 + 16240162-16242075                                         27   6.9  
06_02_0150 + 12295592-12295773,12295874-12295976,12296061-122963...    27   6.9  
05_01_0331 - 2595789-2596160                                           27   9.1  
02_05_0265 + 27267361-27268494                                         27   9.1  

>10_08_0257 -
           16255063-16255183,16255258-16255334,16255861-16255973,
           16256006-16256016,16256328-16256337,16256423-16256486,
           16256582-16256646,16257339-16257474
          Length = 198

 Score =  153 bits (370), Expect = 1e-37
 Identities = 81/152 (53%), Positives = 102/152 (67%)
 Frame = +2

Query: 8   SHKLDLPELQGEIDEVSIKKCQEAARLLKQAVIVEDTSLCFNALCGLPGPYIKWFLDKLK 187
           S KLDLPELQGE +++S +K + AA  +   V+VEDT LCFNAL GLPGPYI    D L 
Sbjct: 41  SLKLDLPELQGEPEDISKEKARMAASQVNGPVLVEDTCLCFNALKGLPGPYI----DLLS 96

Query: 188 PEGLPRLLAGWEDKSAVAVCTFAYCSGEKDNVILFQGRTKGIIVEPRGTRDFGWDCVFQP 367
              L  LL  +EDKSA A+C F+   G  +  + F G+T G IV  RG  DFGWD VFQP
Sbjct: 97  ---LNNLLLAYEDKSAFAMCIFSLALGPGEEPMTFVGKTAGKIVPARGPADFGWDPVFQP 153

Query: 368 AGYNKTYAELPKTEKNLISHRYKALEKLRNYF 463
            G+++TYAE+PK+ KN ISHR KAL  ++ +F
Sbjct: 154 DGFDQTYAEMPKSVKNQISHRGKALALVKEHF 185


>08_01_0353 -
           3107628-3107774,3108177-3108213,3108248-3109164,
           3109210-3110952
          Length = 947

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 255 AKVQTATADLSSHPANNLGSPSG 187
           AK++TA A + S PA+N+G  +G
Sbjct: 148 AKLETAVASMESMPASNMGDKNG 170


>06_01_1118 -
           9213785-9215051,9215811-9215992,9216075-9216611,
           9216742-9217224
          Length = 822

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +2

Query: 11  HKLDLPELQGEIDEVSIKKCQEAARLLKQAVIVEDTSLCFNALCGLPGPYIKWFLDKLK 187
           H++ + E     +E + K+ +EAAR+L    +++ T        G P  Y  W  DK K
Sbjct: 741 HRIQVEEFAAAAEETAGKRGKEAARML----LMDATEAMAQRPDGHPSKYRLWQPDKFK 795


>09_04_0266 + 16240162-16242075
          Length = 637

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 20  DLPELQGEIDEVSIKKCQEAARLLKQAVIVEDTSLCFNALCGLP 151
           D+  L+ E+ E  I++   AAR   + V   +  LCF     LP
Sbjct: 222 DVQRLEWEVLEAKIRRWIRAARAAVRGVFASERRLCFLIFHDLP 265


>06_02_0150 +
           12295592-12295773,12295874-12295976,12296061-12296349,
           12296460-12296611
          Length = 241

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 194 GLPRLLAGWEDKSAVAVCTFAYCSGEKD-NVILFQGRTKGIIVEPRGTRDFGWD 352
           G+P LLA   ++S + VC +A  SG    +     G+ +   ++     DFG+D
Sbjct: 13  GVPSLLAPSSNRSRLPVCAYATTSGRVTMSAEWMPGQPRPAHLDGSSPGDFGFD 66


>05_01_0331 - 2595789-2596160
          Length = 123

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 476 LCFL*NSFLVFLEPCICVKLNSSLFLVILH 387
           +CFL +S LVF    + + L+ SL L+ LH
Sbjct: 74  MCFLCSSLLVFKGHSLVMNLSHSLLLLNLH 103


>02_05_0265 + 27267361-27268494
          Length = 377

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +2

Query: 239 AVCTFAYCSGEKDNVILFQGRTKGIIVEPRGTRDFGWDCVF 361
           A   +A      D+V+ F     G  +EP G  +   DCV+
Sbjct: 287 AAAAWAKVESVGDSVLFFDKHGHGFSLEPNGAAELKRDCVY 327


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,123,590
Number of Sequences: 37544
Number of extensions: 280909
Number of successful extensions: 612
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)