Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324G03f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.36 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   3.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.7  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +2

Query: 269 NGGSCSTESTNCICPPGYTGSYCETRIASYLMSPPPPVNPCSLHPCRNGGTCKPDRNSWM 448
           +  S +++S +   PP    S       SYL      ++PC+   C  G  C+   NS +
Sbjct: 44  DASSSNSDSLSMTIPPSIDRSSIHEE--SYLAESSRSIDPCASKYCGIGKECELSPNSTI 101

Query: 449 NHTCDC 466
              C C
Sbjct: 102 -AVCVC 106



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 463 VAGVVHPRVAIWFAGS 416
           + G+ HP   +WF  S
Sbjct: 881 IGGLQHPGAVVWFTVS 896


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
 Frame = +2

Query: 209 QECNTYDRGDIQ---ASESCQCENGGSCSTES--TNCICPPGYTGSYCETRIASYLMSPP 373
           QEC     G  +    S SC+     S S++   T C C PGY  +  + +       P 
Sbjct: 260 QECTECPIGKFKHEAGSHSCEACPAHSKSSDYGFTECRCDPGYFRAEKDPKKMPCTQPPS 319

Query: 374 PPVN 385
            P N
Sbjct: 320 APQN 323



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +2

Query: 263 CENGGSCSTESTNCICPPGY 322
           C+  G     S  C C PGY
Sbjct: 234 CKGDGKWYLPSGGCHCKPGY 253


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 38  PVYPNPRAEFG 6
           P+YP+P  +FG
Sbjct: 73  PIYPSPMVDFG 83


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 38  PVYPNPRAEFG 6
           P+YP+P  +FG
Sbjct: 73  PIYPSPMVDFG 83


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 292 IHQLHMPTRLYGIVLRDAHRILPDVATSA 378
           +H L    +++G   R  HR+   V  S+
Sbjct: 195 VHSLEFSDQIHGYRCRTMHRLTRQVVVSS 223


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 292 IHQLHMPTRLYGIVLRDAHRILPDVATSA 378
           +H L    +++G   R  HR+   V  S+
Sbjct: 195 VHSLEFSDQIHGYRCRTMHRLTRQVVVSS 223


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 162 FNTTSLMHPLKP 127
           FNTT++  P+KP
Sbjct: 223 FNTTTIFVPVKP 234


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 147 LMHPLKPPLTPALGFTTTVESSTPPTNIGV 58
           L H  +PPL+P    +++  S+  P ++ V
Sbjct: 435 LPHDDQPPLSPQSDSSSSSRSAESPMSVQV 464


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,188
Number of Sequences: 438
Number of extensions: 3535
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)