Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324G02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 40 0.001
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 33 0.12
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 33 0.12
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 33 0.12
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z78064-4|CAB01507.1| 235|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical pr... 29 2.7
AJ561210-1|CAD99212.1| 151|Caenorhabditis elegans NAS-20 protei... 29 2.7
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 28 3.5
U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical pr... 27 6.2
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/106 (29%), Positives = 48/106 (45%)
Frame = -3
Query: 513 TCPDGLVYNDKTGICTWPDEAKKKGCGAAEVFQFECPAVNETFGLTHPRYADPDDCQFFY 334
+C L +N TG C +P K GC EC + + +F AD ++C+ FY
Sbjct: 1212 SCQSSLAFNQLTGKCDYPQ--KVSGCENHGQTNGEC-SEHGSF------IADANNCEVFY 1262
Query: 333 VCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECAEWYKGQLTDA 196
C+ G + C G F+ + C+W VP C+ GQ +D+
Sbjct: 1263 RCVWGRKVVMT-CPSGTVFNPLLSVCDWPSAVPSCS----GQASDS 1303
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -3
Query: 366 YADPDDCQFFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPEC 229
Y + DC C G C+ AF+ + KC++ +KV C
Sbjct: 1190 YRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGC 1235
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -3
Query: 342 FFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECAEWYKGQLTDAEL 190
F++VC +G C+LG+ +D + C ++P A + TDA L
Sbjct: 901 FYFVCSHGRLISSGNCQLGEGYDPSVQGCRTFSEIPARACDEQEVTTDAGL 951
Score = 30.7 bits (66), Expect = 0.66
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 519 MITCPDGLVYNDKTGICTWP 460
++TCP G V+N +C WP
Sbjct: 1271 VMTCPSGTVFNPLLSVCDWP 1290
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 519 MITCPDGLVYNDKTGICTWP-DEAKKKGCGAAEVFQ 415
M CPD LV+N++T C DE K+ A +V++
Sbjct: 125 MAKCPDSLVFNERTQDCRESCDEVKQDTTTAPQVYE 160
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 348 CQFFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECAE 223
C Y+ N +PR C +D NKKC W + EC++
Sbjct: 132 CSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDECSQ 173
Score = 32.7 bits (71), Expect = 0.16
Identities = 25/94 (26%), Positives = 32/94 (34%)
Frame = -3
Query: 510 CPDGLVYNDKTGICTWPDEAKKKGCGAAEVFQFECPAVNETFGLTHPRYADPDDCQFFYV 331
CP LV+N C WP C C V+ F + F
Sbjct: 207 CPANLVFNPAISSCDWPKNV--MDCSEKSEKPQNCGEVDGYFSFGRCSSS-------FSA 257
Query: 330 CINGNTPRRSGCKLGQAFDDVNKKCEWARKVPEC 229
C NG P C G F + N+ C++ V EC
Sbjct: 258 CTNG-IPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -3
Query: 411 ECPAVNETFGLTHPRYADPDDCQFFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPE 232
EC V+ + + + + F+ C G RR+ C F+ C+W + V +
Sbjct: 170 ECSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRN-CPANLVFNPAISSCDWPKNVMD 228
Query: 231 CAE 223
C+E
Sbjct: 229 CSE 231
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 510 CPDGLVYNDKTGICTWPDEAKK 445
CP LV+N+ + IC +P+ + K
Sbjct: 339 CPPSLVFNENSLICDYPETSLK 360
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 33.1 bits (72), Expect = 0.12
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = -3
Query: 351 DCQFFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECAEW 220
DC+ +Y+ N + C G + +N +C++ V +C E+
Sbjct: 799 DCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVEDCPEY 842
Score = 31.9 bits (69), Expect = 0.29
Identities = 22/96 (22%), Positives = 35/96 (36%)
Frame = -3
Query: 513 TCPDGLVYNDKTGICTWPDEAKKKGCGAAEVFQFECPAVNETFGLTHPRYADPDDCQFFY 334
+C GL YN+K G+C + G + N FG + Y+ C +Y
Sbjct: 918 SCAPGLFYNEKNGMCAYKHTVDTCKIGKGS----DIIDSNACFGKSDGYYS--AGCSSYY 971
Query: 333 VCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECA 226
R+ C F ++KC + EC+
Sbjct: 972 FSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECS 1007
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -3
Query: 510 CPDGLVYNDKTGICTWPDEAKKKGCGAAEVFQFE 409
CP LV+N TG C + + +K +++++ E
Sbjct: 463 CPGDLVFNKATGTCDFAENCEKNYMEPSQIYKGE 496
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.12
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 1/100 (1%)
Frame = -3
Query: 519 MITCPDGLVYNDKTGICTWPDEAKKKGCGAAEVFQFECPAVNETFGLTHPRYADPDDC-Q 343
++ CP LV+N +C WP + + C Q C E G Y C
Sbjct: 274 IMDCPASLVFNPTILVCDWPRDVAE--CAGLPTPQPTC----EEDG-----YFSFGQCSS 322
Query: 342 FFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECAE 223
F C NG C G F + +C++ V EC E
Sbjct: 323 SFTACTNGRAIVMF-CPAGLKFSESTVRCDYESNVSECQE 361
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 348 CQFFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECAE 223
C +Y NT R C +D ++KC W V EC E
Sbjct: 151 CTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKE 192
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3
Query: 348 CQFFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECA 226
C ++ +G R C F+ C+W R V ECA
Sbjct: 260 CSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECA 300
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 510 CPDGLVYNDKTGICTWPDEAKK 445
CP LV+ND++ IC +P + K
Sbjct: 432 CPSSLVFNDQSLICDYPQTSLK 453
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.12
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 1/100 (1%)
Frame = -3
Query: 519 MITCPDGLVYNDKTGICTWPDEAKKKGCGAAEVFQFECPAVNETFGLTHPRYADPDDC-Q 343
++ CP LV+N +C WP + + C Q C E G Y C
Sbjct: 274 IMDCPASLVFNPTILVCDWPRDVAE--CAGLPTPQPTC----EEDG-----YFSFGQCSS 322
Query: 342 FFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECAE 223
F C NG C G F + +C++ V EC E
Sbjct: 323 SFTACTNGRAIVMF-CPAGLKFSESTVRCDYESNVSECQE 361
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 348 CQFFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECAE 223
C +Y NT R C +D ++KC W V EC E
Sbjct: 151 CTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKE 192
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3
Query: 348 CQFFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECA 226
C ++ +G R C F+ C+W R V ECA
Sbjct: 260 CSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECA 300
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 510 CPDGLVYNDKTGICTWPDEAKK 445
CP LV+ND++ IC +P + K
Sbjct: 432 CPSSLVFNDQSLICDYPQTSLK 453
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
protein ZC434.5 protein.
Length = 1149
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = -3
Query: 420 FQFECPAVNETFGLTH----PRYADPDDCQFFYVC 328
+ F CP V+ G+TH Y D DD Q++++C
Sbjct: 373 YDFTCPIVDSVEGVTHALRTTEYHDRDD-QYYFIC 406
>Z78064-4|CAB01507.1| 235|Caenorhabditis elegans Hypothetical
protein F57B1.7 protein.
Length = 235
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -1
Query: 389 PSV*PTPAMPTLMIVSSFTFVSTATPPGDLDAS--SDRPLMTSI 264
PS+ TP++P M S+ +T TP + +S S PLMTS+
Sbjct: 68 PSMPFTPSIPMFMPTSADCSPTTQTPTSSIPSSIASTSPLMTSL 111
>Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical
protein T11F9.3 protein.
Length = 379
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = -3
Query: 405 PAVNETFGLTHPRYADPDDCQFFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECA 226
P N T G + D FY C N PR+ CK G + N CE C
Sbjct: 182 PEYNFTMGSLRVAFYDMVLLNKFYGCNCDNHPRKLDCKNGGYQNPAN--CEECL----CT 235
Query: 225 EWYKGQLTD 199
+ + GQL D
Sbjct: 236 DGFNGQLCD 244
>AJ561210-1|CAD99212.1| 151|Caenorhabditis elegans NAS-20 protein
protein.
Length = 151
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = -3
Query: 405 PAVNETFGLTHPRYADPDDCQFFYVCINGNTPRRSGCKLGQAFDDVNKKCEWARKVPECA 226
P N T G + D FY C N PR+ CK G + N CE C
Sbjct: 25 PEYNFTMGSLRVAFYDMVLLNKFYGCNCDNHPRKLDCKNGGYQNPAN--CEECL----CT 78
Query: 225 EWYKGQLTD 199
+ + GQL D
Sbjct: 79 DGFNGQLCD 87
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 494 STTTRPVSAPGLMKPRR 444
STTT PVS P L KPR+
Sbjct: 187 STTTAPVSKPSLSKPRQ 203
>U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical
protein D1044.7 protein.
Length = 400
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 354 DDCQFFYVCINGNTPRRSGCKLGQAFDDVNKKC 256
D CQ C+ G+ + + C+ F +VN+KC
Sbjct: 145 DRCQRSEQCLGGSQCQNNLCQCPNGFANVNQKC 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,596,087
Number of Sequences: 27780
Number of extensions: 283044
Number of successful extensions: 853
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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