Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324G01f
(359 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 106 6e-24
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 105 1e-23
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 103 3e-23
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 101 1e-22
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 97 4e-21
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 89 1e-18
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 73 7e-14
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 67 3e-12
08_02_1528 + 27666356-27667081 30 0.63
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 29 1.1
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 28 1.9
06_03_1358 - 29548440-29549315 27 3.4
02_05_0483 - 29391929-29392256,29393048-29393148,29393640-293938... 27 3.4
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 27 4.4
03_05_0615 + 26137785-26138593,26139307-26141368 27 4.4
05_06_0066 + 25307863-25307871,25308431-25308570,25308712-253087... 27 5.9
05_04_0049 + 17497255-17497908 27 5.9
02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 27 5.9
06_01_0929 - 7171395-7171676,7172019-7172219,7172438-7172524,717... 26 7.7
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 26 7.7
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 106 bits (254), Expect = 6e-24
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 4/102 (3%)
Frame = +1
Query: 52 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 225
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 226 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVERSSEKL 345
ARR+SWR+ISSIEQK E G+E + + KEYR K+E K+
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKI 321
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 105 bits (252), Expect = 1e-23
Identities = 56/102 (54%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Frame = +1
Query: 52 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 225
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 226 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVERSSEKL 345
ARR+SWR+ISSIEQK E G+E + + K+YR K+E K+
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKI 103
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 103 bits (248), Expect = 3e-23
Identities = 55/97 (56%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Frame = +1
Query: 67 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 240
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 241 WRVISSIEQKTE--GSERKQQMAKEYRVKVERSSEKL 345
WR++SSIEQK E G+E + KEYR K+E K+
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKI 97
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 101 bits (243), Expect = 1e-22
Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Frame = +1
Query: 55 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 228
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 229 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVERSSEKL 345
RR+SWR+ISSIEQK E G+E KEYR ++E K+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKI 102
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 97.1 bits (231), Expect = 4e-21
Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 7/92 (7%)
Frame = +1
Query: 73 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 237
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 238 SWRVISSIEQKTE--GSERKQQMAKEYRVKVE 327
SWR++SSIEQK E G+ A+ YR +VE
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVE 101
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 88.6 bits (210), Expect = 1e-18
Identities = 41/86 (47%), Positives = 58/86 (67%)
Frame = +1
Query: 70 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 249
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 250 ISSIEQKTEGSERKQQMAKEYRVKVE 327
+ S+EQK ++ Y+ KVE
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVE 88
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 72.9 bits (171), Expect = 7e-14
Identities = 37/57 (64%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Frame = +1
Query: 163 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVE 327
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIE 74
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 67.3 bits (157), Expect = 3e-12
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +1
Query: 130 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 303
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 304 KEYRVKVERSSEKL 345
EYR KVE +K+
Sbjct: 61 AEYRRKVEAEMDKI 74
>08_02_1528 + 27666356-27667081
Length = 241
Score = 29.9 bits (64), Expect = 0.63
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Frame = +1
Query: 58 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 237
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 238 SWRVISSIEQKTE-GSERKQQMAKEYR-VKVERSSEKLSR 351
W ++S QKT + +Q A E+ V +E E L R
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAIVDLESGVETLFR 226
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 29.1 bits (62), Expect = 1.1
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = +1
Query: 67 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 228
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 229 RRSSWRVISSIEQKTEGSERKQQMAKEYRVKVERSSEKLS 348
+RSS SS + KT E K + VK E+ S+ S
Sbjct: 310 QRSS----SSNKGKTSSKESKSD--DDQTVKKEKKSKSKS 343
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 37 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVA 207
I S+PS+ DKE L +A + D + +KE ++ + NE RN+L +A
Sbjct: 325 IQSMPSAMYIPDKEGLTP-LHVAAKMGHLDVIQDMLKECPDSAELVDNEGRNILHLA 380
>06_03_1358 - 29548440-29549315
Length = 291
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +1
Query: 244 RVISSIEQKTEGSERKQQMAKEYRVKVERSSEKLSRW 354
R+++ ++Q+ +RK + A E +VKV R + K+++W
Sbjct: 231 RIVTELKQQ----QRKLKKALEEQVKVSRETAKMAQW 263
>02_05_0483 -
29391929-29392256,29393048-29393148,29393640-29393834,
29394124-29394240,29394376-29394447,29394840-29394950,
29395029-29395127,29395991-29396047,29396607-29397008,
29397249-29397303,29397725-29397809,29398023-29398130,
29398229-29398295,29398717-29398875,29399277-29399405
Length = 694
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 184 ERNLLSVAYKNVVGARRSSWRVISSIEQK--TEGSERKQQMAKEYRVKVERS 333
ER L+V + A +S W+ ISS + K T+ ERK + K+ V+ +RS
Sbjct: 404 EREYLAVMKRTEYEAIKSQWKSISSTQAKRFTKFRERKGLIDKDV-VRTDRS 454
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 287 LSEPSVFCSIEEMTRHDDRRAPTTFL*ATERR 192
L++ S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 27.1 bits (57), Expect = 4.4
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 94 AKLAEQAE-RYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWR 246
+KLA AE +Y D+ +E+T ELS+ LL +A + ++ WR
Sbjct: 13 SKLATLAEQKYGDVRRIRREITFLTDELSSMNALLLKLADMEELDSQLKEWR 64
>05_06_0066 +
25307863-25307871,25308431-25308570,25308712-25308754,
25308994-25310022
Length = 406
Score = 26.6 bits (56), Expect = 5.9
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = +1
Query: 22 QGHQ*ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAM----KEVTETGVELSNEER 189
+G Q + L + M D E +AKL DD+ A++ E+ E +L++++
Sbjct: 198 KGGQEVEQLRTKLMEKDMEVYELKAKLIAMDAEADDLRASLATKGMEIDELRAKLTSKDA 257
Query: 190 NLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVERSSEKL 345
++ +V N + + + E T+ + + + + + R +E+L
Sbjct: 258 DIAAVEADNAELMKMAEEASHAVKETATKARDTEHALRESAAREAARVAERL 309
>05_04_0049 + 17497255-17497908
Length = 217
Score = 26.6 bits (56), Expect = 5.9
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = +3
Query: 81 TGATCQIGRTS*AI*RHGGRDEGSDGNRRRT*QRGEEPPFSCL*ECRRCPTVIMACHFLN 260
TG + R A G R +G D R R PP S L E T A +F+
Sbjct: 79 TGGVTRAARREAASRERGERGDGDDNRIWRRSNRTAPPPPSPLLEAPVLATEEHADNFVV 138
Query: 261 *TENRGFRKKTANGKR 308
G R +T +G+R
Sbjct: 139 VVAAVGHRAETGSGER 154
>02_04_0347 +
22193708-22193720,22194317-22194390,22195388-22196132,
22196203-22196417,22196505-22196786,22196870-22196998,
22197088-22197267,22197538-22197645,22197888-22198094
Length = 650
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 1 NTFFPFRQGHQ*ISSL 48
+T+FPF+QGH IS+L
Sbjct: 311 STYFPFKQGHLAISTL 326
>06_01_0929 -
7171395-7171676,7172019-7172219,7172438-7172524,
7172973-7173023,7173883-7173987,7174074-7174185,
7174284-7174366,7174434-7174557,7174822-7174973
Length = 398
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 181 EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVK 321
+ERN + +Y N +RSS R + K E + KE +VK
Sbjct: 311 KERNEIHASYTNNSPLKRSSSRSKAKSPSKFSKGEEENSQRKEKKVK 357
>02_05_0220 -
26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 26.2 bits (55), Expect = 7.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 143 IAAAMSSYRSACSANLARCTSSSLSTDIVDDGREL 39
+A A+ + S+C+ N CTSS L ++D +L
Sbjct: 172 MARALLATLSSCTRNRTMCTSSGLLAILLDAAEKL 206
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.125 0.337
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,729,275
Number of Sequences: 37544
Number of extensions: 183597
Number of successful extensions: 647
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -