Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324G01f
         (359 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   0.63 
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   4.4  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   4.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   4.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    20   7.7  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.8 bits (49), Expect = 0.63
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -3

Query: 228 GTYDILISN*KEVPLLVAKFDAGFRHFLHRGRHV 127
           G +D+ + + + V  L     A F    HRG H+
Sbjct: 183 GAFDVTLESGERVTFLDTPGHAAFISMRHRGAHI 216


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 304 KEYRVKVERSSEKL 345
           K+YRVK E  ++KL
Sbjct: 113 KKYRVKFEEEAKKL 126


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 314 LYSFAICCFLSEPSVFC 264
           L S  I C +  PSV C
Sbjct: 6   LLSLLITCLICSPSVHC 22


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 304 KEYRVKVERSSEKL 345
           K+YRVK E  ++KL
Sbjct: 113 KKYRVKFEEEAKKL 126


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +1

Query: 241 WRVISSIEQKTEGSERKQQMAKEYRVKVERSSEKLSRW 354
           W V ++I++K   S  ++      +  + R    LS W
Sbjct: 156 WVVYNNIKRKRSWSRPREPAQTTSKAGIHRKKVLLSVW 193


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.125    0.337 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,139
Number of Sequences: 438
Number of extensions: 1834
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)